BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3120.p
         (344 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094069|ref|YP_001099144.1| selenide, water dikinase (selen...   328   3e-91

>gi|134094069|ref|YP_001099144.1| selenide, water dikinase
           (selenophosphate synthase) [Herminiimonas
           arsenicoxydans]
          Length = 351

 Score =  328 bits (840), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 170/333 (51%), Positives = 229/333 (68%), Gaps = 4/333 (1%)

Query: 5   IRLTQYSHGAGCGCKISPQVLEVILAGSGAQHLDPKLWVGNASRDDAAVYAIDEERGVVS 64
           IRLT++SHG GCGCKI+P VL  IL  +G   L  +L VG  + DDAAVY +++E+ +++
Sbjct: 9   IRLTEFSHGGGCGCKIAPGVLSQILKSTGGFPLPKELLVGIETSDDAAVYRLNDEQALIA 68

Query: 65  TTDFFMPIVDDPFDFGRIAATNAISDIYAMGGDPLMAIAILGWPVNVLPPEVAREVVRGG 124
           TTDFFMPIVDDP+DFGRIAATNAISD+YAMGG P+MA+A++G PV  LP E    +++GG
Sbjct: 69  TTDFFMPIVDDPYDFGRIAATNAISDVYAMGGTPIMALALVGMPVGKLPLETIGLILKGG 128

Query: 125 RAACDAAGIPLAGGHSIDAPEPIFGLAVTGVVEKRHMKRNDTASAGCLLYLTKPLGIGIL 184
            A C  AGIP+AGGH+ID+ EPI+GL V G+V   H+KRN +A AG  L L KP+G+G+L
Sbjct: 129 EAICAEAGIPIAGGHTIDSVEPIYGLVVMGLVHPSHIKRNASARAGDQLILGKPIGVGVL 188

Query: 185 TTAEKKGKLRPDDVGVARDWMCQLNQPGSRFGKLAGVAAMTDVTGFGLLGHLVEMCEGSG 244
           + A KK  L             +LN PG    +LAGV A+TDVTGFG+LGHL+E+  G+G
Sbjct: 189 SAALKKNLLDAAGYASMIANTTKLNTPGKALAQLAGVHALTDVTGFGVLGHLLELARGAG 248

Query: 245 VSARIQHALVPSLPGVPYYLAEGCVPGGTGRNFESYGSKIS---PLSESQKHLLCDPQTS 301
           +SA++  +L+P LP V      GC+ G +GRN++ YG +++    +S  Q+ LL DPQT+
Sbjct: 249 LSAQLDMSLIPLLPQVRQLAELGCITGASGRNWQGYGHEVTLAPSISPLQQALLTDPQTA 308

Query: 302 GGLLVAVRPEANPEFLATAAALGL-ELAPIGEL 333
           GGLLV+  P+A  + L      G  E A IGE+
Sbjct: 309 GGLLVSCAPDAVEQVLQLFRKDGFAEAAVIGEM 341


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.319    0.138    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 726,554
Number of extensions: 33294
Number of successful extensions: 86
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 84
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 1,000,347
Length adjustment: 82
Effective length of query: 262
Effective length of database: 730,157
Effective search space: 191301134
Effective search space used: 191301134
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 129 (54.3 bits)