BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3098.p
         (153 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094180|ref|YP_001099255.1| putative rhodanese-like protein...   205   7e-55
gi|134094425|ref|YP_001099500.1| putative rhodanese-like protein...    69   1e-13

>gi|134094180|ref|YP_001099255.1| putative rhodanese-like protein
           [Herminiimonas arsenicoxydans]
          Length = 154

 Score =  205 bits (522), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 98/148 (66%), Positives = 111/148 (75%)

Query: 6   ILATATQRATEGQLPYAGAVTPQEALALIQADPAVKLVDVRTRAERDWVGVVQIPAAQHL 65
           ILA+A +RA    LPYAGA+TPQEA AL+Q D  VKLVDVRT AERDW+G   I   QHL
Sbjct: 7   ILASARERAHAHALPYAGALTPQEAYALLQNDANVKLVDVRTNAERDWIGRPAIAPEQHL 66

Query: 66  AVQWNLYPEGKPNPQFLEQLREVAAPQDIVLFLCRSGVRSKHAAKLASEHGYSRCFDILE 125
           AVQWNLYP G  N  FL QL +VA    ++LFLCR  VRSKHAAK+A+E+GY+  +DILE
Sbjct: 67  AVQWNLYPGGAQNADFLSQLSQVAGKDSVLLFLCRGAVRSKHAAKVATENGYAHSYDILE 126

Query: 126 GFEGNKDAAGHRKTVEGWCKAGLPWVGA 153
           GFEG KDA GHRK V GWC AGLPW GA
Sbjct: 127 GFEGEKDADGHRKNVNGWCHAGLPWTGA 154


>gi|134094425|ref|YP_001099500.1| putative rhodanese-like protein,
           sulfurtransferase [Herminiimonas arsenicoxydans]
          Length = 194

 Score = 68.6 bits (166), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 27/131 (20%)

Query: 42  LVDVRTRAERDWVGVV-----QIPAAQH-LAVQWNLYPEGKPNPQFLEQLREVAAPQ--- 92
            VDVRTR E  +VG+       IP  +H     W+       N +F   +    AP+   
Sbjct: 55  FVDVRTRGEVSYVGMATPVDANIPYVEHPYDAPWD-----DKNARFKLDVNSDFAPELAR 109

Query: 93  ----------DIVLFLCRSGVRSKHAAKLASEHGYSRCFDILEGFEGNKDAAGHR---KT 139
                     D V+ +CRSG RS  AA L ++ GY++ + +++GFEG+    G R   + 
Sbjct: 110 RMEQAGMGKDDTVILICRSGDRSARAANLLADLGYTKVYTVVDGFEGDVAKDGPRAGERA 169

Query: 140 VEGWCKAGLPW 150
           V GW  +GLPW
Sbjct: 170 VNGWKNSGLPW 180


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.319    0.133    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 308,563
Number of extensions: 11783
Number of successful extensions: 40
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 38
Number of HSP's successfully gapped: 2
Length of query: 153
Length of database: 1,000,347
Length adjustment: 74
Effective length of query: 79
Effective length of database: 756,517
Effective search space: 59764843
Effective search space used: 59764843
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 125 (52.8 bits)