BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3080.p
         (167 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094623|ref|YP_001099698.1| putative acetyltransferase [Her...    72   1e-14

>gi|134094623|ref|YP_001099698.1| putative acetyltransferase
           [Herminiimonas arsenicoxydans]
          Length = 153

 Score = 72.0 bits (175), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 1/124 (0%)

Query: 15  ALCGIYNHYVQTTVISFETEAVSVEAMAARIAEVQA-QFPWLVFEENGEVLGYAYASKWK 73
           A+  IYN  + +  ++ + E V+V +      E  A + P  V E +G++LG+   S + 
Sbjct: 3   AIVAIYNSTIASRQVTADIEPVTVASRLEWFNEHSADKRPIWVLENDGKILGWLAYSNFN 62

Query: 74  PRAAYQHSVESSVYLRHDAGGRGIGKQLYRALIARLKPLGVHLVIGGIAQPNPASVALHE 133
           PRAAY H+ E S+Y+  DA G+G+G       IA    L +H ++G I   N  S+ L E
Sbjct: 63  PRAAYIHTAEISIYIAQDARGKGLGGYFLTEAIAYASTLNIHTLVGLIFAHNEPSLKLFE 122

Query: 134 SVGF 137
             GF
Sbjct: 123 RFGF 126


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.321    0.134    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 328,182
Number of extensions: 12374
Number of successful extensions: 31
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 31
Number of HSP's successfully gapped: 1
Length of query: 167
Length of database: 1,000,347
Length adjustment: 75
Effective length of query: 92
Effective length of database: 753,222
Effective search space: 69296424
Effective search space used: 69296424
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 125 (52.8 bits)