BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2929.p
         (229 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094486|ref|YP_001099561.1| hypothetical protein HEAR1259 [...   336   7e-94

>gi|134094486|ref|YP_001099561.1| hypothetical protein HEAR1259
           [Herminiimonas arsenicoxydans]
          Length = 229

 Score =  336 bits (861), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 168/229 (73%), Positives = 197/229 (86%)

Query: 1   MNQLDTTFGRSTTSLASRNRVLRNTYWLLALSMVPTVLGAWLGVQMHFSLFAASPMIGFV 60
           M+ L  T+G +    ++R+RVLRNTYWLLALSM+PTVLGAWLGVQ  F+ FAASP +G +
Sbjct: 1   MSNLQQTYGSTYDITSTRHRVLRNTYWLLALSMIPTVLGAWLGVQFKFAFFAASPFMGMM 60

Query: 61  LFLAIAFGFFFAIEKTKNSGWGVAFLLGFTFFMGLMLSRLIEYTLGFSNGAGLIMTAFGG 120
           +FLAIAFGFF+AIEK KNSG GVA LLGFTFFMGLMLSRLI + LGF+NG  LIMTAFGG
Sbjct: 61  VFLAIAFGFFYAIEKFKNSGLGVALLLGFTFFMGLMLSRLIGHILGFANGTSLIMTAFGG 120

Query: 121 TAIIFCGMATIATVSKRDFSGMGKWLFAGVLVILVASLANIFLHLPALQLTISVVAIAIF 180
           TA I   MAT+ATVSKRDFSG+GKWLF GVLVI+VA++ANI+L LPALQLTISVVAI IF
Sbjct: 121 TAAILGVMATVATVSKRDFSGLGKWLFMGVLVIIVAAIANIWLQLPALQLTISVVAIGIF 180

Query: 181 SAYILFDVQQVVNGGETNYISATLSIYLDVYNVFVNLLSILGILGGNRD 229
           SA+IL+DVQ+++NGGETNY++ATL IYL VYN+F NLLS+LGI GG RD
Sbjct: 181 SAFILYDVQRIINGGETNYVTATLGIYLSVYNIFANLLSLLGIFGGERD 229


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.330    0.143    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 334,974
Number of extensions: 11510
Number of successful extensions: 63
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 63
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 1,000,347
Length adjustment: 79
Effective length of query: 150
Effective length of database: 740,042
Effective search space: 111006300
Effective search space used: 111006300
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 127 (53.5 bits)