BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2899.p
         (969 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094240|ref|YP_001099315.1| phosphoenolpyruvate carboxylase...  1433   0.0  

>gi|134094240|ref|YP_001099315.1| phosphoenolpyruvate carboxylase
           [Herminiimonas arsenicoxydans]
          Length = 944

 Score = 1433 bits (3710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 721/944 (76%), Positives = 807/944 (85%), Gaps = 7/944 (0%)

Query: 28  RAPAAKRSPATDKDAPLKEDIRLLGRLLGEVVREQEGDDVFEVVETIRQTAVRFRRESDA 87
           + P    + + DKDAPLKEDIRLLGRLLG+V+R+Q+GD VFE+VETIRQTAVRFRRESD 
Sbjct: 6   KTPTRTLTSSADKDAPLKEDIRLLGRLLGDVLRDQQGDAVFEIVETIRQTAVRFRRESDV 65

Query: 88  KAGAELDKLLKKLTRDQTNSVVRAFSYFSHLANIAEDQHHNRRRRAHLLAGSQAQPGSVA 147
           +AGAEL+KLLKKLTR+QT SVVRAFSYFSHLANIAEDQHHNRRRRAHLLAGSQ Q GSVA
Sbjct: 66  QAGAELNKLLKKLTREQTISVVRAFSYFSHLANIAEDQHHNRRRRAHLLAGSQPQDGSVA 125

Query: 148 YALSRLDDAGVSGAQVRSFLKEALVSPVLTAHPTEVQRKSILDAEREIARLVAERDLPLT 207
            AL +L DAGVSGA VR F K+AL+SPVLTAHPTEVQRKSILDAE +IA L+A RDLP+T
Sbjct: 126 CALEKLHDAGVSGATVRKFFKDALISPVLTAHPTEVQRKSILDAEHDIASLLAARDLPMT 185

Query: 208 PRELRHNTELLRARIATLWQTRMLRYTKLTVADEIENALSYYRITFLRELPALYDDIEAE 267
            +E   NTE + +R+ TLWQTR+LRYTKLTV DEI NALSYYR+TFLRELPALY+DIE+E
Sbjct: 186 AKERAENTERIHSRVTTLWQTRLLRYTKLTVEDEINNALSYYRMTFLRELPALYEDIESE 245

Query: 268 IDSQFPSRAKARAAELPPYLQMGSWIGGDRDGNPNVNAATMQHALKRQSTTIFDYYLDEV 327
           I  +FP RA + + E P Y+QMGSWIGGDRDGNPNVN  TMQ AL RQSTTI ++YL+EV
Sbjct: 246 IAERFPQRASSASREQPLYIQMGSWIGGDRDGNPNVNGDTMQLALARQSTTILEFYLEEV 305

Query: 328 HTLGAELSISTLMVDASPELLALADASPDHSEHRADEPYRRALIGIYARLAATARSLGVV 387
           H LGAELSIST +   SPE+ ALAD SPD SEHR DE YRRALIG+YARLAATAR+ G  
Sbjct: 306 HALGAELSISTFLAGVSPEVQALADKSPDTSEHRTDEQYRRALIGMYARLAATARAQGAT 365

Query: 388 NILRQEIGSAAPYANPAECVAELEVLVSSLQAHHGAALIKPRLAGVKRAVEIFGFHLATL 447
            +LR+EIGSA  Y N AE  ++L+ L  SL+A HGAALIKPRLA + RA EIFGFHLATL
Sbjct: 366 -VLRKEIGSAPAYENAAEFSSDLQALADSLKARHGAALIKPRLASLLRAAEIFGFHLATL 424

Query: 448 DMRQSSDIHERVLADLLAKAQVESHYADLSEERKITLLLGELAQPRLLYSPYLQYAEETE 507
           DMRQSSD+HERVL++L   AQVES YA L EE+K+ LLL EL  PRLLYSPY+ Y+EET 
Sbjct: 425 DMRQSSDVHERVLSELFKCAQVESAYAALPEEKKVALLLAELDHPRLLYSPYVDYSEETN 484

Query: 508 SELTILRAAREIRRRYGERAIRNYIISHTETLSDLLEVLLLQKETGLLHIEGKQ--LQEL 565
           SEL+ILRAA +IR+RYG RAIRNYIISHTET+SD+LEVLLLQ+ETGLL ++  +  + +L
Sbjct: 485 SELSILRAASDIRKRYGARAIRNYIISHTETVSDMLEVLLLQRETGLLRLDTDKDSVGQL 544

Query: 566 ELMVIPLFETIPDLRCAAQIMRGWLTLPQVKGLIAKHGKLQEVMLGYSDSNKDGGFLTSN 625
           ELMVIPLFETIPDLR AA IM   + +PQV+ LIAK G LQEVMLGYSDSNKDGGFLTSN
Sbjct: 545 ELMVIPLFETIPDLRLAATIMEQVMAIPQVRKLIAKQGHLQEVMLGYSDSNKDGGFLTSN 604

Query: 626 WELYKAENQLVELFNEVGVKLRLFHGRGGTVGRGGGPSYQAILAQPPGTVNGQIRLTEQG 685
           WELYKAE QLVE+FN  GVKLRLFHGRGGTVGRGGGPSY+AILAQPPGTVNGQIRLTEQG
Sbjct: 605 WELYKAETQLVEVFNNAGVKLRLFHGRGGTVGRGGGPSYEAILAQPPGTVNGQIRLTEQG 664

Query: 686 EIIASKFSNPDIGRRNLELLVAATLEASLMPTGSDDKEARKLAEFERVMEELSERAYRAY 745
           EIIASKFSNP+IGRRNL LLVAATLEASL+P  S+ + A+KLAEFE VM ELSE AY+AY
Sbjct: 665 EIIASKFSNPEIGRRNLALLVAATLEASLIPAPSETRHAKKLAEFESVMGELSELAYKAY 724

Query: 746 RNLVYETPGFTDYFFAATPIAEIAQLNIGSRPASRKATQRIEDLRAIPWGFSWGQCRLLL 805
           RNLVYETPGFTDYFFAATPIAEIA+LNIGSRPASRKAT+RIEDLRAIPWGFSWGQCRLLL
Sbjct: 725 RNLVYETPGFTDYFFAATPIAEIAELNIGSRPASRKATRRIEDLRAIPWGFSWGQCRLLL 784

Query: 806 PGWYGFGSAVSGWLEQAGNAKESAKRMSTLRAMCKEWPFFAALLSNMDMVLSKTDLAVAS 865
           PGWYGFGSA+  WL Q  N    AKR++TLRAM KEWPFFA LLSNMDMVLSKTDLAVAS
Sbjct: 785 PGWYGFGSAIELWLTQGDN---KAKRVATLRAMLKEWPFFATLLSNMDMVLSKTDLAVAS 841

Query: 866 RYAGLVADRKLRTSIFGRITDEHERTSTMLSAITGSKERLAGNPLLARSIKNRFAYLDPL 925
           RYA LV+D+KLR SIF RI +EHERTS  L+ ITG KERLA NPLLARSIKNRFAYLDPL
Sbjct: 842 RYAELVSDKKLRNSIFKRIVNEHERTSASLTLITGKKERLANNPLLARSIKNRFAYLDPL 901

Query: 926 NHLQVELIKRHRATAAAKRTPEERVQRGIHLTINGVAAGLRNTG 969
           NHLQVELIKRHRAT       ++RV+RGIHL+ING+AAGLRNTG
Sbjct: 902 NHLQVELIKRHRATMNGG-DADDRVRRGIHLSINGIAAGLRNTG 944


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.318    0.133    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 1,580,359
Number of extensions: 60386
Number of successful extensions: 198
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 193
Number of HSP's successfully gapped: 1
Length of query: 969
Length of database: 1,000,347
Length adjustment: 91
Effective length of query: 878
Effective length of database: 700,502
Effective search space: 615040756
Effective search space used: 615040756
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 133 (55.8 bits)