BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2894.p
         (177 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094245|ref|YP_001099320.1| inorganic pyrophosphatase [Herm...   315   7e-88

>gi|134094245|ref|YP_001099320.1| inorganic pyrophosphatase
           [Herminiimonas arsenicoxydans]
          Length = 179

 Score =  315 bits (808), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 145/176 (82%), Positives = 163/176 (92%)

Query: 1   MSLNNVPAGRDLPNDFNVIIEIPMNADPIKYEVDKDTGAIFVDRFMGTAMHYPCNYGYIP 60
           MSLN+VPAG DLPNDFNVIIEIPMNADP+KYEVDK++GAIFVDRFM TAMHYPCNYGY+P
Sbjct: 1   MSLNHVPAGTDLPNDFNVIIEIPMNADPVKYEVDKESGAIFVDRFMSTAMHYPCNYGYVP 60

Query: 61  QTLSQDGDPVDVLVITPFPLIPGVVVRCRPIGVLKMADESGIDAKLLAVPVDKILPIYTH 120
           QTLS DGDPVDVLVITPFPL PGVVVRCR IG+LKM DE+G DAKLLAVP+DKILPIY+H
Sbjct: 61  QTLSDDGDPVDVLVITPFPLYPGVVVRCRAIGMLKMTDEAGGDAKLLAVPIDKILPIYSH 120

Query: 121 WQKPEDLNELRLNQIKHFFEHYKDLEKGKWVKVEGWEGPDAARAEILAGVEAFNKA 176
           WQKPED+N+LRL QI+HFFEHYKDLEKGKWVK+EGW GPD A+ EI++GV A+ K+
Sbjct: 121 WQKPEDINDLRLQQIQHFFEHYKDLEKGKWVKIEGWVGPDEAKEEIMSGVAAYKKS 176


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.320    0.141    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 382,282
Number of extensions: 16476
Number of successful extensions: 36
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 36
Number of HSP's successfully gapped: 1
Length of query: 177
Length of database: 1,000,347
Length adjustment: 76
Effective length of query: 101
Effective length of database: 749,927
Effective search space: 75742627
Effective search space used: 75742627
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 125 (52.8 bits)