BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2885.p (921 letters) Database: BlastDatabases/690/690 3295 sequences; 1,000,347 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|134093705|ref|YP_001098780.1| putative periplasmic assimilato... 594 e-171 gi|134093636|ref|YP_001098711.1| NAD dependent formate dehydroge... 319 3e-88 gi|134096579|ref|YP_001101654.1| NAD dependent formate dehydroge... 289 5e-79 gi|134094636|ref|YP_001099711.1| formate dehydrogenase subunit a... 165 9e-42 gi|134093742|ref|YP_001098817.1| arsenite oxidase large subunit ... 143 5e-35 >gi|134093705|ref|YP_001098780.1| putative periplasmic assimilatory nitrate reductase, large subunit [Herminiimonas arsenicoxydans] Length = 944 Score = 594 bits (1531), Expect = e-171, Method: Compositional matrix adjust. Identities = 352/943 (37%), Positives = 505/943 (53%), Gaps = 72/943 (7%) Query: 15 TRSTCPYCGVGCGVTASMQQDGSLGIKGDEQHPANFGRLCVKGSALG----ETVDLEGRL 70 T++TC YCGVGCGV + + ++GD HPANFGRLC KGS L + + R Sbjct: 29 TKATCCYCGVGCGVLIQSDGEKVIAVRGDPDHPANFGRLCTKGSTLHLMARPALQQQSRA 88 Query: 71 LHPQVRDAQG-ALQQVSWDVALEQVAGKFSSIIAEHGPNAVALYVSGQLLTEDYYIANKL 129 L+P++R A+ ++ SW ++ + KF++ I + GP++V Y+SGQLLTEDYY+ NKL Sbjct: 89 LYPEMRLARSDERERTSWATTMDFIVNKFAATIRDQGPDSVGFYLSGQLLTEDYYVFNKL 148 Query: 130 MKGYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELADLIVLVGANAAWCHPI 189 KG IG+ N+DTNSRLCMSSAVAG+K+ G D P CYED++ A++I +VG+N A+ HPI Sbjct: 149 AKGLIGTNNVDTNSRLCMSSAVAGYKQTLGADAPPPCYEDIDQAEVIFIVGSNTAYAHPI 208 Query: 190 LFQRIAKLKETRPALRLIVIDPRRTATCELADLHLPIKAGTDVWLFNGLMSYLAHRGLRD 249 L++RI ++ P L++IV DPRRT T ADL LPI GTDV LFNG++ L D Sbjct: 209 LYRRIEDARKANPQLKIIVADPRRTDTAREADLFLPILPGTDVALFNGMLHICLWEDLVD 268 Query: 250 NAFIAAHTNGFDEALAVADADCADPATVARLCKVDLQDLLAFYQAFAETDKVVTGFSMGV 309 +IAAHT F E P VA +C + +DL+ + F ++ ++ + G+ Sbjct: 269 LDYIAAHTEDFAELKQTVRE--YTPKFVADICGIKEEDLMQAARMFGKSTATLSMYCQGL 326 Query: 310 NQSSVGSDKVNSIINCHLATGRIGKPGMGPFSITGQPNAMGGREVGGLANMLAAHMDLEQ 369 NQSS G+ K ++IN HLAT +IGKPG GPFS+TGQPNAMGGREVGGLA ML+AH DL Sbjct: 327 NQSSSGTAKNAALINLHLATHQIGKPGAGPFSLTGQPNAMGGREVGGLATMLSAHRDLAN 386 Query: 370 PLHREIVQEFWQSPRMADQPGLKAVDMFRAIEEGRIKAVWIIATNPLVSLPDADLVQRAL 429 P HR + + W + PG AV+MF A+ G IK +WI+ TNP S+P+ +++ AL Sbjct: 387 PQHRAEIAKLWGVADVPATPGKSAVEMFEAVRTGEIKIIWIVCTNPAQSMPEQAMIREAL 446 Query: 430 QKCELVVSSDVIAQTDTNAYAHVLLPALAWGEKDGTVTNSERRISRQRAFLSAPGQARGD 489 + ELV+ + T + YA VLLPA W EK+GTVTNSERRI+R ++ L G++R D Sbjct: 447 RNAELVIVQEAYKTTASCDYADVLLPASTWSEKEGTVTNSERRITRFKSVLPKLGESRHD 506 Query: 490 WRILCEVAQRM-GFTG-----FDFDGPHAIFDEHARLSAYRNGQADAGQVRRVFNLAGLT 543 W I + A+R+ G G F F+ I++EH + R+ +T Sbjct: 507 WEIAVDFARRLEGALGKQSSIFPFESTEEIWNEHRESTRGRD--------------LDIT 552 Query: 544 GLDRASYDALAPIQWPVQRLSDGSINGTARVLQDLRFSHPDGRARFIPTAPRSPGHAPCE 603 GL + P QWP +G+ G R+ +D F GRA+F+ T + Sbjct: 553 GLSFKLLEEQGPQQWP---FPEGATTGRKRLYEDGIFPTLSGRAKFVNTVYQPVAEPVDA 609 Query: 604 DYPLILNTGRVRDHWHTMTRTGKSATLASHIPESFIDIHPQDALLYGVREGGLARISSRW 663 YP L TGR+RD WH M+RTG A L SH E + + D + G L ++S+ Sbjct: 610 RYPFHLTTGRLRDQWHGMSRTGTVAQLFSHASEPSVVLSKIDMERRLLNVGDLVHVTSKR 669 Query: 664 GAMVARVQHGGGIPRGALFVPIHWNGQSAS--------DARVGAVVNPVVDPVSGEPEFK 715 G+ + V G + G F+ +HW + S V A+ +P DP S +PE K Sbjct: 670 GSQIFPVALGDDMRAGQAFIGMHWGEEYVSGRGRDEGGTYGVNALTSPAFDPSSRQPELK 729 Query: 716 HTPVAIEEFRVGWHGFIL--TRHALVLDDITHWTRVQGRDFVRYE--LAGRNQI------ 765 H V I + W + A +L D+ R R F L GR+++ Sbjct: 730 HAAVKILKAEFPWRFIVFGWIEEAKLL-DLQAALRPMMRKFAYASCTLFGRDKVGVLFRA 788 Query: 766 -NDHTAWARALLGVQD----ADADWLEYEDLSDGSYRAVHVVEDRIDMCLFMSARPDLPS 820 +D+ A + ++ A A L Y+D G+ R + +V+ ++ +S D+ + Sbjct: 789 ADDYAAHSALTAEIEQKFSIAGAQVLRYDDSKRGNSRRILIVDGKLQA---VSLAGDISA 845 Query: 821 RSWLAGLFAKDKLEDADRVGLL-------VGQPIEKGADTGPTVCSCFGVGR---NTICR 870 WL K+ LE V L +P + G VC+CF V N + Sbjct: 846 EGWL-----KEYLESEQPVAALGRLLLMPSNKPPQHFKSRGRIVCNCFNVSETEINDVVI 900 Query: 871 AIKEQGLQEVSQVTACLKAGGNCGSCVPEIKKLLVEIKVLAAA 913 + + + LK G NCGSCVPE+KK+++ V+ +A Sbjct: 901 TMPGNADASLGALQQKLKCGTNCGSCVPELKKIILLQDVVRSA 943 >gi|134093636|ref|YP_001098711.1| NAD dependent formate dehydrogenase subunit alpha Fdh1A [Herminiimonas arsenicoxydans] Length = 946 Score = 319 bits (818), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 218/723 (30%), Positives = 351/723 (48%), Gaps = 53/723 (7%) Query: 17 STCPYCGVGCGVTASMQQDGSLGIKGDEQHPANFGRLCVKGSALGETVDLEGRLLHPQVR 76 S CPYCGVGC +T +++ + L ++G + PAN RLCVKG + + RL P +R Sbjct: 231 SVCPYCGVGCQLTYNIKDNKILYVEGRDG-PANRERLCVKGRYGFDYANHPHRLTKPLIR 289 Query: 77 DAQG---------------ALQQVSWDVALEQVAGKFSSIIAEHGPNAVALYVSGQLLTE 121 A ++ +W+ ALE G F+ I HG ++A + S + E Sbjct: 290 RADAPKRGDFVMDPDRVMEVFREATWEEALEVAGGNFAKIRDTHGKKSLAGFGSAKGSNE 349 Query: 122 DYYIANKLMKGYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELADLIVLVGA 181 + Y+ KL++ GS N+D +RLC +S+V G V D+ A++++++GA Sbjct: 350 EAYLFQKLVRTGFGSNNVDHCTRLCHASSVVALLEGIGSGAVSNPVMDVTKAEVVIIIGA 409 Query: 182 NAAWCHPILFQRIAKLKETRPALRLIVIDPRRTATCELADLHLPIKAGTDVWLFNGLMSY 241 N HP+ I +LIV DPRRT +A + KA TDV + N +M+ Sbjct: 410 NPTVNHPVAATWIKNAVSN--GTKLIVCDPRRTDMARIAHRFMQFKADTDVAMLNAMMNV 467 Query: 242 LAHRGLRDNAFIAAHTNGFDEALAVADADCADPATVARLCKVDLQDLLAFYQAFAETDKV 301 + GL D FI + T G++E + + P +A +C +D + L + +A + Sbjct: 468 IVTEGLVDKEFIESRTIGYEELRK--NVEGYTPELMAPICGIDAETLRYVARLYATSKAS 525 Query: 302 VTGFSMGVNQSSVGSDKVNSIINCHLATGRIGKPGMGPFSITGQPNAMGGREVGGLANML 361 + + MGV+Q G+D +I L TG+IG+PG G + GQ N G + G + + Sbjct: 526 MILWGMGVSQHIHGTDNARCLIALSLMTGQIGRPGTGLHPLRGQNNVQGASDAGLIPMVY 585 Query: 362 AAHMDLEQPLHREIVQEFWQ-SPRMAD-QPGLKAVDMFRAIEEGRIKAVWIIATNPLVSL 419 + + P R + W S + D +PGL V++ AI +G+I+ +++ NP +S Sbjct: 586 PDYQSVSDPKIRANFAKAWNMSVDLLDPEPGLTVVEIMHAITDGKIRGLYVQGENPAMSD 645 Query: 420 PDADLVQRALQKCELVVSSDVIAQTDTNAYAHVLLPALAWGEKDGTVTNSERRISRQRAF 479 PDA+ + AL + +V D+ T+T A V+LPA A+ EK GT TN++R + R Sbjct: 646 PDANHAREALAALDHLVVQDIFL-TETAYLADVILPASAFPEKTGTFTNTDRTVQMGRQA 704 Query: 480 LSAPGQARGDWRILCEVAQRMGFTGFDFDGPHAIFDEHARLSAYRNGQADAGQVRRVF-N 538 L+ PG+A+ D I+ ++A R+G +++ +FDE +R + Sbjct: 705 LNPPGEAKQDLWIIQQMANRLG-CNWNYKHVSEVFDE----------------MRHTMPS 747 Query: 539 LAGLTGLDRASYDALAPIQWPVQRLSDGSINGTARVLQDLRFSHPDGRARFIPTAPRSPG 598 +AG+T D+ + +P ++ D G V D F GRARF+P Sbjct: 748 IAGITWERLEREDS---VTYPCEKEGDP---GEPVVFVD-SFPRESGRARFVPADIIPAA 800 Query: 599 HAPCEDYPLILNTGRVRDHWHTMTRTGKSATLASHIPESFIDIHPQDALLYGVREGGLAR 658 P +YP++L TGR +HWHT + T ++ L S P+ IHP D G + G + Sbjct: 801 ERPDTEYPMVLITGRQLEHWHTGSMTRRATVLDSIEPDPIALIHPLDLANMGGKPGDIIT 860 Query: 659 ISSRWGAMVARVQHGGGIPRGALFVPIHWNGQSASDARVGAVVNPVVDPVSGEPEFKHTP 718 + SR G + + PRGA+FVP + +A + + N +DP PEFK+ Sbjct: 861 LESRRGEVSLYARADDSSPRGAVFVPFCY-----YEAAINRLTNAALDPFGKIPEFKYCA 915 Query: 719 VAI 721 + I Sbjct: 916 IRI 918 >gi|134096579|ref|YP_001101654.1| NAD dependent formate dehydrogenase subunit alpha fdsA [Herminiimonas arsenicoxydans] Length = 956 Score = 289 bits (739), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 205/712 (28%), Positives = 326/712 (45%), Gaps = 42/712 (5%) Query: 17 STCPYCGVGCGVTASMQQDGSLGIKGDEQHPANFGRLCVKGSALGETVDLEGRLLHPQVR 76 +TC YCGVGC A M+ + + + + AN G CVKG + R+L P +R Sbjct: 242 TTCAYCGVGCSFKAEMKGNEVVRMVPNPDGKANQGHACVKGRFAWGYATHKDRMLKPMIR 301 Query: 77 DA-QGALQQVSWDVALEQVAGKFSSIIAEHGPNAVALYVSGQLLTEDYYIANKLMKGYIG 135 ++VSW+ A+ A +F I A++G +++ VS + E+ Y+ KL++ G Sbjct: 302 SKISDPWREVSWEEAINYTASEFKRIQAKYGKDSIGGLVSSRCTNEEGYLVQKLVRAAFG 361 Query: 136 SANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELADLIVLVGANAAWCHPILFQRIA 195 + N+DT +R+C S G K GE +E + +D+IV++GAN HP+ ++ Sbjct: 362 NNNVDTCARVCHSPTGYGLKVTLGESAGTQTFESVMKSDVIVVIGANPVNAHPVFASQMK 421 Query: 196 KLKETRPALRLIVIDPRRTATCE----LADLHLPIKAGTDVWLFNGLMSYLAHRGLRDNA 251 + R +LIV+DPR T + AD HL + GT+V + N L + L Sbjct: 422 --RRIRQGAKLIVVDPRTTEMVKSPHVQADYHLKLMPGTNVAIVNALAYVILSEKLHKPE 479 Query: 252 FIA--AHTNGFDEALAVADADCADPATVARLCKVDLQDLLAFYQAFAETDKVVTGFSMGV 309 FIA + F E + P V ++ V +D+ A + +A + +GV Sbjct: 480 FIAERCEADSFKEWEHFILQEENSPEAVEKISGVPAEDIRAAARMYANAKNGSIYYGLGV 539 Query: 310 NQSSVGSDKVNSIINCHLATGRIGKPGMGPFSITGQPNAMGGREVGGLANMLAAHMDLEQ 369 + + GS V I N +ATG +G+ G+G + GQ N G ++G + L + + Sbjct: 540 TEHAQGSTTVIGIANLAMATGNVGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHVSD 599 Query: 370 PLHREIVQEFWQSPRMADQPGLKAVDMFRAIEEGRIKAVWIIATNPLVSLPDADLVQRAL 429 R + W + +PGL+ +MF A +G ++ + + S PD V AL Sbjct: 600 STTRAEFEAAWNC-VLDPEPGLRIPNMFDAAMDGTFMGLYCQGEDIVQSDPDTQHVTAAL 658 Query: 430 QKCELVVSSDVIAQTDTNAYAHVLLPALAWGEKDGTVTNSERRISRQRAFLSAPGQARGD 489 E +V D+ +T YAHV LP ++ EKDGT TN+ERRISR R + P +GD Sbjct: 659 SAMECIVVQDIFLN-ETAKYAHVFLPGSSFLEKDGTFTNAERRISRVRKVM-PPKAGKGD 716 Query: 490 WRILCEVAQRMGFTGFDFDGPHAIFDEHARLSAYRNGQADAGQVRRVFNLAGLTGLDRAS 549 W + C ++ +G+ + P I DE A L+ G + +R+ L G Sbjct: 717 WEVTCMLSNALGYP-MSYKHPREIMDEIASLTPTFTGVS----FKRIDELGG-------- 763 Query: 550 YDALAPIQWPVQRLSDGSINGTARVLQDLRFSHPDGRARFIPTAPRSPGHAPCEDYPLIL 609 IQWP +D + GT + F G+ +FI T G +PLIL Sbjct: 764 -----SIQWPC---NDAAPEGTP-TMHIGEFVR--GKGKFIDTKYFGAGEKVTRKFPLIL 812 Query: 610 NTGRVRDHWHTMTRTGKSATLASHIPESFIDIHPQDALLYGVREGGLARISSRWGAMVAR 669 TGR+ ++ +T ++ H E ++IHPQDAL G++ I SR G V R Sbjct: 813 TTGRILSQYNVGAQTRRTHNNMWH-SEDRLEIHPQDALDRGIKHNDWVGIESRAGQTVLR 871 Query: 670 VQHGGGIPRGALFVPIHWNGQSASDARVGAVVNPVVDPVSGEPEFKHTPVAI 721 + + G ++ H+ A+ + D + PE+K T V + Sbjct: 872 AEITENVQPGVVYTTFHFPESGAN-----VITTSSSDWATNCPEYKVTAVQV 918 >gi|134094636|ref|YP_001099711.1| formate dehydrogenase subunit alpha FdnG (partial match) [Herminiimonas arsenicoxydans] Length = 988 Score = 165 bits (418), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 135/522 (25%), Positives = 222/522 (42%), Gaps = 38/522 (7%) Query: 12 VATTRSTCPYCGVGCGVTASMQQDGSLGIKGDEQHPANFGRLCVKGSALGETVDLEGRLL 71 + R+ C +C VGC A ++ + + P N G C KG++L E E RL Sbjct: 75 IEVKRTVCTHCSVGCASDAIVENGVWVRQEPVFDSPINLGAHCAKGASLREHGHGEYRLK 134 Query: 72 HPQVRDAQGALQQVSWDVALEQVAGKFSSIIAEHGPNAVALYVSGQLLTEDYYIANKLMK 131 +P ++ G Q++SWD A+ ++ K I GP++V S + E + K + Sbjct: 135 YP-MKLVNGKYQRISWDQAMNEITAKMLDIKKASGPDSVFFVGSSKHNNEQAALLRKFVS 193 Query: 132 GYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELADLIVLVGANAAWCHPILF 191 + G+ N D +R+C S+ VAG +G + Y D++ + + +G+NAA HP+ Sbjct: 194 -FFGTNNTDHQARICHSTTVAGVANTWGYGAMTNSYNDMQNSKAALYIGSNAAEAHPVSM 252 Query: 192 QRIAKLKETRPALRLIVIDPRRTATCELADLHLPIKAGTDVWLFNGLMSYLAHRGLRDNA 251 + KE ++IV+DPR T T AD ++ I++GTD+ GL+ ++ G D Sbjct: 253 LHMLHAKEN--GTKMIVVDPRFTRTAAKADQYVRIRSGTDIPFLYGLLYHIFKNGWEDKK 310 Query: 252 FIAAHTNGFDEALAVADADCADPATVARLCKVDLQDLLAFYQAFAETDKVVTGFSMGVNQ 311 +I G ++ A+ P V C V ++ + A+ + MG Q Sbjct: 311 YINDRVYGMEK--VKAEVMTWTPEKVEEACGVTEAEMYRAAETMAKNRPSTLVWCMGQTQ 368 Query: 312 SSVGSDKVNSIINCHLATGRIGKPGMGPFSITGQPNAMGGREVG----------GLANML 361 S+G+ V + LA G IG G G G N G +VG GLA Sbjct: 369 HSIGNAMVRASCIVQLALGNIGVSGGGANIFRGHDNVQGATDVGPNPDSLPGYYGLATGS 428 Query: 362 AAHMDLEQPLHREIVQEFWQSPRMADQPGLKAVDMFRAI--------EEGRIKAVWIIAT 413 H + E V++ + S M ++ G A+ ++ +K V Sbjct: 429 WKHWCAVWGVDYEWVKKQYVSQAMMEKSGTTVSRWVDAVLEKSENIDQDNTVKGVLFWGH 488 Query: 414 NPLVSLPDADLVQRALQKCELVVSSD-------------VIAQTDTNAYAHVLLPALAWG 460 P D+ ++A K +L+V D V Q A LLPA Sbjct: 489 APNSQTRGLDM-KKAFDKLDLLVVIDPYPSATAAMAAMKVDGQELNPNRAVYLLPAATQF 547 Query: 461 EKDGTVTNSERRISRQRAFLSAPGQARGDWRILCEVAQRMGF 502 E G+VT S R + + + ++R D I+ ++AQ++GF Sbjct: 548 ETSGSVTASNRSLQWREKVIEPLFESRTDHMIMYQMAQKLGF 589 >gi|134093742|ref|YP_001098817.1| arsenite oxidase large subunit [Herminiimonas arsenicoxydans] Length = 826 Score = 143 bits (360), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 175/709 (24%), Positives = 297/709 (41%), Gaps = 94/709 (13%) Query: 28 VTASMQQDGSLGIKGDEQHPANFGRLCVKGSAL--------GETVDLEGRLLHPQVRDAQ 79 +TA + ++ I D++ N G +G + G T D RL +P+ Sbjct: 74 ITAKNGKRSNIMIIPDKECVVNQGLSSTRGGKMAGYMYAADGMTAD---RLKYPRFYAGD 130 Query: 80 GALQQVSWDVALEQVAGKFSSIIAEHGPNAV--ALYVSGQLLT--EDYYIANKLMKGYIG 135 L SWD A+ AG I+ + + A + G E+ + + KLM I Sbjct: 131 QWLD-TSWDHAMAIYAGLTKKILDQGNVRDIMFATFDHGGAGGGFENTWGSGKLMFSAIQ 189 Query: 136 SANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELADLIVLVGANAA----------W 185 + + ++R +S R G + YED ++AD+I +G N W Sbjct: 190 TPTVRIHNRPAYNSECHA-TREMGIGELNNSYEDAQVADVIWSIGNNPYETQTNYFLNHW 248 Query: 186 CHPILFQRIAKLKE------TRPALRLIVIDPRRTATCELAD-------LHLPIKAGTDV 232 + K K+ P L +I +DPRRT + +A+ LHL I GTDV Sbjct: 249 LPNLNGSTEEKKKQWFAGEPVGPGL-MIFVDPRRTTSIAIAEQTAKDRVLHLDINPGTDV 307 Query: 233 WLFNGLMSYLAHRGLRDNAFIAAHTNGFDEALAVADADCADPATVARLCKVDLQDLLAFY 292 LFNGL++Y+ +G FIA HT GF++A+ AD + + + + L+ + Sbjct: 308 ALFNGLLTYVVQQGWIAKEFIAQHTVGFEDAVKTNQMSLADCSRITGVSEDKLRQAAEWS 367 Query: 293 ---QAFAETDKVVTGFSMGVNQSSVGSDKVNSIINCHLATGRIGKPGMGPFSITGQPNAM 349 +A + + + + G+ + + +S+++ +AT +G+ G G M Sbjct: 368 YKPKAAGKMPRTMHAYEKGIIWGNDNYNIQSSLLDLVIATQNVGRRGTGCVR-------M 420 Query: 350 GGREVGGLANMLAAHMDLEQ-PLHREIVQ------EFWQSPRMA---DQPGLKAVDMFRA 399 GG + G + H E+ + +EI+Q +W + L+ V + R+ Sbjct: 421 GGHQEG---YVRPPHPTGEKIYVDQEIIQGKGRMMTWWGCNNFQTSNNAQALREVSLRRS 477 Query: 400 --IEEGRIKAVWIIATNPLVSLPDADLVQRALQKCELVVSSDVIAQTDTNAYAHVLLPAL 457 +++ KA A + D++ A K L V+S + T + AH++LPA Sbjct: 478 QIVKDAMSKARGASAAEMV------DIIYDATSKGGLFVTSINLYPTKLSEAAHLMLPAA 531 Query: 458 AWGEKDGTVTNSERRISRQRAFLSAPGQARGDWRILCEVAQRMG--------------FT 503 GE + T N ERR+ F+ APG A D I + A + F+ Sbjct: 532 HPGEMNLTSMNGERRMRLSEKFMDAPGDALPDCLIAAKAANTLKAMYEAEGKPEMVKRFS 591 Query: 504 GFDFDGPHAIFDEHARLSAYRNGQADAGQVRRVFNLAGLTGLDRASYDALAPIQWPVQRL 563 GFD+ F++ R + + Q LA T L A + +Q P++R+ Sbjct: 592 GFDWKTEEDAFNDGFRSAGQPGAEPIDSQGGSTGVLATYTLLRAAGTNG---VQLPIKRV 648 Query: 564 SDGSINGTARVLQDLRFSHPDGRARFIPTAPRSPGHAPCED----YPLILNTGRVRDHWH 619 +G + GTA D +F DG+A F P AP + P E+ + LN GR + W Sbjct: 649 ENGKMIGTAIHYDDNKFDTKDGKAHFKP-APWNGLPKPVEEQKAKHKFWLNNGRANEVWQ 707 Query: 620 TMTRTGKSATLASHIPESFIDIHPQDALLYGVREGGLARISSRWGAMVA 668 + + + S P ++I+++P DA GV G + + + +G+ A Sbjct: 708 SAYHDQYNDFVKSRYPLAYIELNPGDAQSLGVAAGDVVEVFNDYGSTFA 756 Database: BlastDatabases/690/690 Posted date: Apr 9, 2011 4:48 AM Number of letters in database: 1,000,347 Number of sequences in database: 3295 Lambda K H 0.321 0.136 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3295 Number of Hits to DB: 1,855,048 Number of extensions: 81850 Number of successful extensions: 274 Number of sequences better than 1.0e-08: 6 Number of HSP's gapped: 242 Number of HSP's successfully gapped: 7 Length of query: 921 Length of database: 1,000,347 Length adjustment: 90 Effective length of query: 831 Effective length of database: 703,797 Effective search space: 584855307 Effective search space used: 584855307 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 133 (55.8 bits)