BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2720.p
         (314 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094698|ref|YP_001099773.1| malonyl CoA-ACP transacylase [H...   246   8e-67
gi|134095266|ref|YP_001100341.1| malonyl-CoA-[acyl-carrier-prote...   101   6e-23

>gi|134094698|ref|YP_001099773.1| malonyl CoA-ACP transacylase
           [Herminiimonas arsenicoxydans]
          Length = 315

 Score =  246 bits (629), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 137/318 (43%), Positives = 196/318 (61%), Gaps = 8/318 (2%)

Query: 1   MSMRLAILCPGQGAQHAGMFDLLREDAQAAAFLAQCPLRDQLQAPLEQVLNDPAQRYANR 60
           MS R+AILC GQG QHA MFD+LREDA+ +  L   PL +     L  +L D    +AN 
Sbjct: 1   MSNRIAILCSGQGGQHADMFDILREDARVSQLLQTWPLEELCGHALADILADEHLMFANP 60

Query: 61  NAQPLIVAAQLAAWQALRAPLSAIAGAPTLVAGYSVGELSAYAVAGVIAAEDTVALAAQR 120
            AQPL+VA+ LA+W+A++     +   P + AGYS+GEL++++VAG +A ++T+ LA  R
Sbjct: 61  IAQPLVVASILASWEAVKG----LIPRPLITAGYSIGELASWSVAGALAPDETIRLAGLR 116

Query: 121 AAAMTQAASAYPQQGLMAISG----VAIDSVQACLARHGGFVAIVTGDDSLIAGGSDAAL 176
           A  +    +    Q ++AIS     + +  ++  L  HG FVAI   +D++IAGG     
Sbjct: 117 AKLLQGCITPEQPQVMLAISLSQALIQMAELEPVLRAHGFFVAIEVDEDAVIAGGLLGNA 176

Query: 177 HAAAAELAGQGARNSALPVGLASHTPLMQAAVAPFSAHLDALALCSPALTLLAGVTGHTV 236
            A  A ++  G + + LP+ +ASHTP M+ AV PF   + A  + +P   +LAG++G  +
Sbjct: 177 DALEASVSAAGGKVTRLPIEIASHTPWMRNAVKPFEDAVTASGMSNPLFPVLAGISGARL 236

Query: 237 SDSAQAQALLLRQLCEPIQWSACMDACAERGVNVALELGPGAALSRMLRERHPHIACRSL 296
            +   A + L RQL EPI+W   MD+  E GV +A+ELGPGAALSRML  RHPHI CRS+
Sbjct: 237 HNKDAAASALSRQLAEPIRWQGVMDSLDEAGVAMAIELGPGAALSRMLEARHPHIQCRSV 296

Query: 297 ADFRSLNGALAWLRRQAD 314
           A+FRSL G   W+ + AD
Sbjct: 297 AEFRSLAGLKRWVEQYAD 314


>gi|134095266|ref|YP_001100341.1| malonyl-CoA-[acyl-carrier-protein]
           transacylase [Herminiimonas arsenicoxydans]
          Length = 310

 Score =  101 bits (251), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 152/314 (48%), Gaps = 13/314 (4%)

Query: 4   RLAILCPGQGAQHAGMFDLLREDAQAAAFLAQCPLRDQLQAPLEQVLNDPAQRYAN--RN 61
           + A + PGQG+Q  GM +   ++A     LA+    D LQ  L +++ +  +   +   N
Sbjct: 3   KFAFVFPGQGSQAIGMLNGFADNAVVQQTLAEA--SDALQFDLARLIAEGPKEELDLTTN 60

Query: 62  AQPLIVAAQLAAWQALRAPLSAIAGAPTLVAGYSVGELSAYAVAGVIAAEDTVALAAQRA 121
            QP+++ A +A +   RA ++A    P LVAG+S+GE SA   AGVI  +D V L   RA
Sbjct: 61  TQPVMLTAAVAMY---RAWIAAGGKTPALVAGHSLGEYSALVAAGVIPFKDAVPLVRFRA 117

Query: 122 AAMTQAASAYPQQGLMAISGVA-IDSVQACL-ARHGGFVAIVTGDD--SLIAGGSDAALH 177
            AM Q A    Q G+ AI G++  D +  C+ A  G  V  V  +    ++  G  AA+ 
Sbjct: 118 KAM-QEAVPVGQGGMAAILGLSDADVLAVCVEAAQGDVVEAVNFNAPAQVVIAGHKAAIE 176

Query: 178 AAAAELAGQGARNS-ALPVGLASHTPLMQAAVAPFSAHLDALALCSPALTLLAGVTGHTV 236
            A      +GA+ +  LPV    H+ L++ A      ++  +A   P + L+  V    V
Sbjct: 177 RACELAKAKGAKRALVLPVSAPFHSSLLKPASDRLREYMAGVAFSVPQIPLINNVDVAVV 236

Query: 237 SDSAQAQALLLRQLCEPIQWSACMDACAERGVNVALELGPGAALSRMLRERHPHIACRSL 296
           SD    +  L+RQ   P++W   +   A  GV   +E GPG  L+ + +  +  +   ++
Sbjct: 237 SDVDSIKDALVRQAANPVRWVETVQKMAAEGVKDVVECGPGKVLAGLTKRINGELTGHAI 296

Query: 297 ADFRSLNGALAWLR 310
            D  SL+  L  L+
Sbjct: 297 VDQVSLDAVLELLK 310


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.321    0.130    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 495,376
Number of extensions: 15658
Number of successful extensions: 89
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 85
Number of HSP's successfully gapped: 2
Length of query: 314
Length of database: 1,000,347
Length adjustment: 82
Effective length of query: 232
Effective length of database: 730,157
Effective search space: 169396424
Effective search space used: 169396424
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 128 (53.9 bits)