BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2682.p (1043 letters) Database: BlastDatabases/690/690 3295 sequences; 1,000,347 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|134094275|ref|YP_001099350.1| multidrug ABC transporter membr... 735 0.0 gi|134095880|ref|YP_001100955.1| aminoglycoside/multidrug efflux... 358 1e-99 gi|134093332|ref|YP_001098407.1| putative acriflavin resistance/... 345 6e-96 gi|134095559|ref|YP_001100634.1| aminoglycoside/multidrug efflux... 342 8e-95 gi|134094822|ref|YP_001099897.1| RND divalent metal cation efflu... 246 5e-66 >gi|134094275|ref|YP_001099350.1| multidrug ABC transporter membrane protein [Herminiimonas arsenicoxydans] Length = 1034 Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust. Identities = 432/1023 (42%), Positives = 626/1023 (61%), Gaps = 8/1023 (0%) Query: 1 MNLSRPFILRPVATLLLSLALTLLGALAYRMLPVAPLPQVDFPTIMVTASLAGASPETMA 60 MN+S I RPV T+LLS+A+ ++G Y LP+A LP D P I VTASL GASPE MA Sbjct: 1 MNISELCIRRPVMTVLLSIAVVVVGFFCYFKLPIAALPSYDTPVINVTASLPGASPEVMA 60 Query: 61 ATIAAPLERAMGQIAGITEMTSSSSQGSTNVIVQFDLERDIDGAARDVQAAINAARSLLP 120 +++A PLE+ IAG+ ++SSS+ G+T+++++FD RDID AA DVQAA+ A+ LP Sbjct: 61 SSVATPLEKQFSTIAGVATISSSSTLGNTSIVLEFDQNRDIDAAAVDVQAALLRAQRSLP 120 Query: 121 SSLKTLPTYRKANPADAPILLLALTSKTVDKGKLYDLASSKLQQTIAQVQGVGQVSLMGS 180 + LP YRK NPADA ILLLALTS ++ +L D A + + +++ + GV QV + G Sbjct: 121 EEMNDLPAYRKVNPADAAILLLALTSPSLSLSELNDYAENLISPSLSTIDGVAQVQVYGQ 180 Query: 181 ALPAVRIELQPQQLSHYGISLDTVRQVVANATTNLPKGELQGEGLHWWVDANGQLTKASD 240 AVRI+++P +L+ ++LD + + A N P G L G + AN QL A Sbjct: 181 RRYAVRIKVKPSELAARNMTLDEIAASIRAANANSPVGVLDGPRQTLTLQANRQLQNAEA 240 Query: 241 YTNLVVSYQNGAAVKLSDVARVYDSVQDQYVAGYFNDSPSVMMGITRSSGANMLATIDAI 300 + NLV+S G +L DVA V DSV+ + N PS+++ + R AN +A +DA+ Sbjct: 241 FGNLVISSSKGQTTRLKDVATVEDSVESTKSGSWVNGKPSIVLAVQRQPNANTVAVVDAV 300 Query: 301 KAQLPIMQKMLPKEVQLSLAMDRSPSIRGSLRETELTLLISTLLVIAVVFLFLRNARAVL 360 K LP+ Q +P + L + DRS SIR ++ + +LTLL++ LLV+ V+FLFL+ A Sbjct: 301 KHTLPLFQSQMPASIDLQVLNDRSVSIREAIHDVKLTLLLTILLVVLVIFLFLKRLTATA 360 Query: 361 IPAVALPISLIGTCAAMYLLGYSLDTLSLMALIIATGFVVDDAIVVLENISRHLEEGAPP 420 IP ++LPISLIG CA MY +G+SLD +SL+ + IA G VVDDAIV+LENI RH+E+G P Sbjct: 361 IPVLSLPISLIGCCALMYWMGFSLDNVSLLGITIAVGLVVDDAIVMLENIVRHIEDGMEP 420 Query: 421 LKAALDGSKEVGFTVLSMTASLIAVFLPILLMGSIVGRLFREFAVTLSVSLVLSMIVSLT 480 L AAL GS+EV FT++S++ SL+AVF+PI M ++G L EFA +S+++++S ++SLT Sbjct: 421 LAAALKGSREVSFTIISISISLVAVFIPIFFMPGVIGLLLHEFAAVVSLAVLVSAVMSLT 480 Query: 481 LTPMLCSRLLRAHKHDASGAPVQP--NVFYRAIERVLNAVSDGYASSLEWVMRHKRLTLL 538 L PMLCSR L+ K VQP N R+ E+V N + Y +L+W + H+ L+ Sbjct: 481 LVPMLCSRFLKHEKAGHENDAVQPQENWLIRSFEKVFNRLLASYTRALDWSLAHRTTMLV 540 Query: 539 SLVLTVALNLFLFTAVQKGFFPDQDTGMLMGQMRADQAASFQSVHPQLLAFSRLIQSDPD 598 T L +LF + KGFFP +D G + + Q AS+ ++ + A +IQ+DP+ Sbjct: 541 LAAGTFVLTAYLFITIPKGFFPTEDIGQISVTIEGPQDASYPTMVKLVTAVGTIIQNDPN 600 Query: 599 VASVMASTGGGAFGSRNTANFFVSLKDSSQRKSTATEIANRLTRKASGVPGASLFLMAGQ 658 V + T N N FV LK + R+ + L K VPG +++L Q Sbjct: 601 VETATMRT-----RDSNVGNMFVGLKPRTAREPM-DAVLRGLRAKVKAVPGVTVYLTPVQ 654 Query: 659 DLRMGGRSANATYQYSLQSDSLDTLREWSPKVYAVLRKLPELTSVDTDAQSGGQAVKLVI 718 +LR+GGR++ + +QY LQS D L W+ K+ A +R V +D+Q G + I Sbjct: 655 NLRLGGRTSKSQFQYVLQSVRADELNVWAEKIQAEMRADGSFIDVTSDSQLKGLQAVVDI 714 Query: 719 DRIAARRLGLEMTNIDDFLNNAFSQRQVATQYQALNQYYTILGLAPQYTQDPEVLKQLFV 778 +R A G+ + +I L +A+ RQV+T Y + N Y IL QD L ++++ Sbjct: 715 NRDRANEAGVGIADIRTALYSAYGDRQVSTIYTSSNSYSVILQDESVGRQDESDLSKIYL 774 Query: 779 LNSAGNAVPLSAFARLQSASAPLAVAHQNQSATTTIAFNLADGVSLQQAKAAIDAAVISL 838 + G VPL + A ++ + P++V HQ Q TI+FNLA G+ L A +D ++ Sbjct: 775 RSKTGVLVPLLSVATVKRTAGPISVNHQGQLQAITISFNLAPGIPLGDATRKVDQIKDAI 834 Query: 839 GLPGSIHGGMQGTAQAFVAMASAMPWLILAALLAVYIVLGMLYESWIHPITILSTLPSAG 898 LP SI G A F + ++ L++ AL+ +YI+LG+LYES+IHP+TIL+ LPSA Sbjct: 835 SLPSSIVTNYAGDAAVFQSSQASQIALVVLALVVIYILLGVLYESYIHPVTILAGLPSAA 894 Query: 899 VGALLLLLATHTQFTVIALIGVLLLIGIVKKNAILMVDFALHVERQHDWAAERAILEACR 958 VGALL L + T+IA+IG+LLLIG+VKKNAI+M+DFAL +R+ AI AC Sbjct: 895 VGALLTLRIFGFELTMIAMIGILLLIGLVKKNAIMMIDFALAAQREQGLTPLEAIRTACI 954 Query: 959 MRLRPILMTTMAAFFGALPMVLQTGGDAALRRPLGLTICGGLALSQLLTLYTTPVVYVYM 1018 +R RPI+MTT+AA GALP+ L G A LR+PLGL + GGL +SQ++TL TPV+Y+++ Sbjct: 955 LRFRPIMMTTLAAAVGALPIALGLGAGAELRQPLGLAVVGGLMVSQVITLLITPVIYLFL 1014 Query: 1019 DRM 1021 DR Sbjct: 1015 DRF 1017 >gi|134095880|ref|YP_001100955.1| aminoglycoside/multidrug efflux pump [Herminiimonas arsenicoxydans] Length = 1049 Score = 358 bits (918), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 289/1031 (28%), Positives = 508/1031 (49%), Gaps = 47/1031 (4%) Query: 3 LSRPFILRPVATLLLSLALTLLGALAYRMLPVAPLPQVDFPTIMVTASLAGASPETMAAT 62 + + FI RPV +L++ + L GALA LPV+ P + PTI++TA+ GA+ +T+ + Sbjct: 1 MGKFFIDRPVFAWVLAIFIMLAGALAITSLPVSQYPNIAPPTIVITATYPGATAQTLDDS 60 Query: 63 IAAPLERAMGQIAGITEMTSSS-SQGSTNVIVQFDLERDIDGAARDVQAAINAARSLLPS 121 + + +E+ M G+ + S S + G + V F E + D AA DV + + LP+ Sbjct: 61 VTSLIEQEMNGADGLQYVESQSQANGQVQITVTFSPETNPDLAAVDVSNRLKRVEARLPA 120 Query: 122 SLKTLPTYRKANPADAPILLLALTSKT--VDKGKLYDLASSKLQQTIAQVQGVGQVSLMG 179 ++ T + A ++ + L+S +D L D S + + +V GVGQ L G Sbjct: 121 AV-TQQGVQVAKARSNFLMFIGLSSTDGRLDPVALGDYLSRNVLNEVKRVPGVGQAQLFG 179 Query: 180 SALPAVRIELQPQQLSHYGISLDTVRQVVANATTN-LPKGELQGE-------GLHWWVDA 231 + A+RI + P +L G++L A T N L G + G+ + V Sbjct: 180 TER-AMRIWIDPNKL--VGLNLTPAEVTAAINTQNALVAGGILGDLPSPSSQQISATVVV 236 Query: 232 NGQLTKASDYTNLVV-SYQNGAAVKLSDVARVYDSVQDQYVAGYFNDSPSVMMGITRSSG 290 NGQL+ ++ +++ + ++G++V+L DVAR+ Q +G + +P+ +G+ S Sbjct: 237 NGQLSSPEEFGKIILRANKDGSSVRLRDVARIEVGGQSYQTSGRLDGNPTSFIGVQLSPT 296 Query: 291 ANMLATIDAIKAQLPIMQKMLPKEVQLSLAMDRSPSIRGSLRETELTLLISTLLVIAVVF 350 AN L T A+ ++ + + P V+ ++ D S ++ S+ E TL+ + +LV V++ Sbjct: 297 ANALGTATAVHKKMEDLARYFPAGVKYTVPYDTSKFVKISIEEVVKTLIEAIILVFLVMY 356 Query: 351 LFLRNARAVLIPAVALPISLIGTCAAMYLLGYSLDTLSLMALIIATGFVVDDAIVVLENI 410 LFL+N R LIP + +P++L+GT A + + G+S++ L++ +++A G +VDDAIVV+EN+ Sbjct: 357 LFLQNIRYTLIPTIVVPVALLGTFATLLVFGFSINVLTMFGMVLAIGILVDDAIVVVENV 416 Query: 411 SRHL-EEGAPPLKAALDGSKEVGFTVLSMTASLIAVFLPILLMGSIVGRLFREFAVTLSV 469 R + EEG P A ++ ++ +T LIAVFLP+ G VG ++R+F++++ Sbjct: 417 ERIMSEEGLSPRDATRKAMGQITGAIIGITLVLIAVFLPMAFFGGAVGAIYRQFSLSMVA 476 Query: 470 SLVLSMIVSLTLTPMLCSRLL----RAHKHDASGAPVQPNVFYRAIERVLNAVSDGYASS 525 S+V S +++ TLTP LC+ +L + H H+ G F+ R+ + S Y Sbjct: 477 SMVFSALMAFTLTPALCATILKPVEKGHHHEKGG-------FFGWFNRIFHKTSLSYQGF 529 Query: 526 LEWVMRHKRLTLLSLVLTVALNLFLFTAVQKGFFPDQDTGMLMGQMRADQAASFQSVHPQ 585 + ++ ++ L VA L+ + F P +D G ++ ++ AS Sbjct: 530 IGKMLTKTTRYMIVYGLIVACVGLLYARLPASFLPSEDQGYIITNVQLPAGASSGRTLEV 589 Query: 586 LLAFSRLIQSDPDVASVMASTGGGAFGS-RNTANFFVSLKDSSQR--KSTATEIANRLTR 642 L P V V++ +G G+ +N F D S+R + TA IA R Sbjct: 590 LKQIEEYYLKQPAVEHVISISGFSFSGNGQNAGLVFTPFIDWSKRGKEDTADAIAGRAFG 649 Query: 643 KASGVPGASLFLMAGQDLRMGGRSANATYQY----SLQSDSLDTLREWSPKVYAVLRKLP 698 S + A +F + +R G + T++ L D+L R ++ + + Sbjct: 650 AFSQIKDAIVFPLNPPPIRELGNATGFTFRLQDRGGLGHDALVAARN---QLLGMAGQSK 706 Query: 699 ELTSVDTDAQSGGQAVKLVIDRIAARRLGLEMTNIDDFLNNAFSQRQVAT-QYQALNQYY 757 L V + ++L IDR A LG+ +I+ L+ + V Q Q Sbjct: 707 ILAGVRPEGLEDAPQLQLDIDRDKANALGVPFASINSVLSTSLGSSYVNDFPNQGRQQRV 766 Query: 758 TILGLAPQYTQDPEVLKQLFVLNSAGNAVPLSAFARLQSASAPLAVAHQNQSATTTIAFN 817 + AP+ Q + L +L+ ++ G VP S+F + + P+ + N I+ Sbjct: 767 IVQADAPRRLQADD-LTKLYARSTTGAMVPFSSFITSKWITGPVQLIRYNGYPAMKISGG 825 Query: 818 LADGVSLQQAKAAIDAAVISLGLPGSIHGGMQGTAQAFVAMASA--MPWLILAALLAVYI 875 + G S A ++A V LP I G + T Q+ S P L +L+AV++ Sbjct: 826 VKPGFSTGDAMKEMEALVQK--LPAGI--GYEWTGQSLEEQTSGNQAPALYALSLIAVFL 881 Query: 876 VLGMLYESWIHPITILSTLPSAGVGALLLLLATHTQFTVIALIGVLLLIGIVKKNAILMV 935 VL LYES P++++ +P +GALL + V +G++ ++G+ KNAIL++ Sbjct: 882 VLAALYESTSIPLSVMLVVPLGILGALLGVTLRGMPNDVYFKVGMIAVVGLSAKNAILII 941 Query: 936 DFALHVERQHDWAAERAILEACRMRLRPILMTTMAAFFGALPMVLQTGGDAALRRPLGLT 995 +FA ++ Q E A LEA +R RPI+MT++A G LP+V+ +G +A +R +G Sbjct: 942 EFAKDLQAQGKGLIE-ATLEAVHLRFRPIIMTSLAFILGVLPLVIASGAGSASQRAIGTG 1000 Query: 996 ICGGLALSQLL 1006 + GG+ + +L Sbjct: 1001 VMGGMITATVL 1011 >gi|134093332|ref|YP_001098407.1| putative acriflavin resistance/multidrug efflux transporter AcrB [Herminiimonas arsenicoxydans] Length = 1024 Score = 345 bits (885), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 285/1060 (26%), Positives = 500/1060 (47%), Gaps = 81/1060 (7%) Query: 16 LLSLALTLLGALAYRMLPVAPLPQVDFPTIMVTASLAGASPETMAATIAAPLERAMGQIA 75 +L + L L G L+++ V P ++ P + V+A+L+GA+P + +A +E ++ + Sbjct: 1 MLFVLLGLAGLLSFKSAAVQDFPDIELPIVTVSAALSGAAPAQLETEVARKIEDSVATLQ 60 Query: 76 GITEMTSSSSQGSTNVIVQFDLERDIDGAARDVQAAINAARSLLPSSLKTLPTYRKANPA 135 G+ + + G V V+F LE+++ A DV+ A+ + R+ LP+ L+ PT KA+ A Sbjct: 61 GVKNIYTKVLDGLVTVTVEFILEKNLSDAVNDVRDAVASVRADLPAELRD-PTVTKASTA 119 Query: 136 DAPILLL---ALTSKTVDKGKLYDLASSKLQQTIAQVQGVGQVSLMGSALPAVRIELQPQ 192 +L A +D+ +L + + + I V G+G V +G VR+EL Sbjct: 120 GRVVLTFTAAAAPGSALDEQELSWFVDNTVSKAILAVPGIGAVKRVGGVTREVRVELDTA 179 Query: 193 QLSHYGISLDTVRQVVANATTNLPKGELQGEGLHWWVDANGQLTKASDYTNLVVSYQNGA 252 +++ ++ V + + P G G V + A++ + + +G Sbjct: 180 KMAALNVAAVDVSRRLKLVQQEAPGGRGDVSGAEQSVRTIATVQTAAELAAMDIPLADGH 239 Query: 253 AVKLSDVARVYDSVQDQYVAGYFNDSPSVMMGITRSSGANMLATIDAIKAQLPIMQKMLP 312 ++L VA V D++ ++ + + V I R+ GA+ L + +A + +Q+ P Sbjct: 240 HIRLDRVATVTDTIAERRSSASQDGKTVVGFEIFRTKGASELEVANGSRAAVAALQERYP 299 Query: 313 KEVQLSLAMDRSPSIRGSLRETELTLLISTLLVIAVVFLFLRNARAVLIPAVALPISLIG 372 V LA+D + + + + L L + VV+ FLR+ RA L+ A ALP+S+I Sbjct: 300 N-VVFKLAIDNAKPVEENFEASMELLYEGAFLAVLVVWWFLRDWRATLVAAAALPLSVIP 358 Query: 373 TCAAMYLLGYSLDTLSLMALIIATGFVVDDAIVVLENISRHLEEGAPPLKAALDGSKEVG 432 T + GY+L+ ++L++L + G +VDDAIV +ENISRHL G P++AA++ + E+G Sbjct: 359 TFLGLAYFGYTLNMVTLLSLALVVGVLVDDAIVEIENISRHLRMGKTPMQAAMEAADEIG 418 Query: 433 FTVLSMTASLIAVFLPILLMGSIVGRLFREFAVTLSVSLVLSMIVSLTLTPMLCSRLLR- 491 V++ T +L+AVFLP M I G F++F T ++++ S++V+ LTPM+ + +L+ Sbjct: 419 MAVIATTFALVAVFLPTAFMAGIPGLFFKQFGWTAVLAILASLLVARLLTPMMAAYILKP 478 Query: 492 -AHKHDASGAPVQPNVFYRAIERVLNAVSDGYASSLEWVMRHKRLTLLSLVLTVALNLFL 550 AH+ + G +Q Y ++ W + H+ L +A +F Sbjct: 479 TAHREEKDGWLMQ-----------------RYLKTMRWCLTHR------LTTAIASGIFF 515 Query: 551 FTAVQ------KGFFPDQDTGMLMGQMRADQAASFQSVHPQLLAFSRLIQSDPDVASVMA 604 F ++ GF P D + ++ + A I + ++ SV A Sbjct: 516 FGSIMLVPLLPTGFVPAADRAQTQINVELPPGSTLAETTTVVEAVRTKIAENKNIKSVFA 575 Query: 605 STGGGAFG---------SRNTANFFVSLKDSSQRKSTATEIANRLTRKASGVPGASLFLM 655 S GGG+ G A ++ S RK EI ++ + +PGA Sbjct: 576 SIGGGSSGDAFAPGASAEARRAVLTITTTHRSDRKEKMAEIEAQIRTAIADIPGAR---- 631 Query: 656 AGQDLRMGGRSANATYQYSLQSDSLDTLREWSPKVYAVLRKLPELTSVDTDAQSGGQAVK 715 +G Q L+S+ L + KV LR L + +V++ A + Sbjct: 632 ----FTVGPPDTGVKMQLVLRSEDPVALLTTAQKVERELRTLKGIGNVNSSASLVRPEII 687 Query: 716 LVIDRIAARRLGLEMTNIDDFLNNA-------------FSQRQVATQYQALNQYYTILGL 762 + D A LG+ +I + + A S+RQV + + L Sbjct: 688 VRPDSARAADLGVTAASIGETVRVATAGDYDTSLPKMNLSERQVPIRVK----------L 737 Query: 763 APQYTQDPEVLKQLFVLNSAGNAVPLSAFARLQSASAPLAVAHQNQSATTTIAFNLADGV 822 D +++L V G V L A + S P + N+S T F++ G Sbjct: 738 PDDVRADLSAIERLTVPGKNG-PVMLGNVATVTMESGPAQIDRLNRSRNVT--FDVELGT 794 Query: 823 -SLQQAKAAIDAAVISLGLPGSIHGGMQGTAQAFVAMASAMPWLILAALLAVYIVLGMLY 881 SL A A LP ++ G AQ A+ ++ + +L +Y VL +L+ Sbjct: 795 RSLGDLNAEARALPTLQNLPPAVKIAELGDAQEMQALFNSFGLAMAIGVLCIYGVLVLLF 854 Query: 882 ESWIHPITILSTLPSAGVGALLLLLATHTQFTVIALIGVLLLIGIVKKNAILMVDFALHV 941 + ++ P+TIL+ LP + GA + LL T + ++ ++IG+++L+GIV KN+IL+VD+A+ + Sbjct: 855 KDFMQPVTILAALPLSIGGAFVALLLTRSALSMPSMIGLIMLMGIVTKNSILLVDYAI-L 913 Query: 942 ERQHDWAAERAILEACRMRLRPILMTTMAAFFGALPMVLQTGGDAALRRPLGLTICGGLA 1001 R+ A+++AC R RPI+MTT+A G LP+ L GD + R P+ +T+ GGL Sbjct: 914 ARKAGMNRVDALVDACHKRSRPIVMTTIAMGAGMLPLALGWVGDPSFRSPMAITVIGGLI 973 Query: 1002 LSQLLTLYTTPVVYVYMDRMGSAAKRLWRRRRPRPSVPAS 1041 S LL+L P V+ Y+D + KR+ ++ R +V A+ Sbjct: 974 TSTLLSLLVVPAVFTYIDDLEHWLKRMLQKARGMEAVEAA 1013 >gi|134095559|ref|YP_001100634.1| aminoglycoside/multidrug efflux pump [Herminiimonas arsenicoxydans] Length = 1053 Score = 342 bits (876), Expect = 8e-95, Method: Compositional matrix adjust. Identities = 292/1063 (27%), Positives = 512/1063 (48%), Gaps = 51/1063 (4%) Query: 3 LSRPFILRPVATLLLSLALTLLGALAYRMLPVAPLPQVDFPTIMVTASLAGASPETMAAT 62 ++R FI RP+ +LS+ + L G LA LP++ P + PT+ + A+ GAS + + + Sbjct: 1 MARFFIDRPIFAWVLSIIIMLAGGLAIFTLPISQYPTIAPPTVSIQATYPGASAKVVENS 60 Query: 63 IAAPLERAMGQIAGITEMTSSSS-QGSTNVIVQFDLERDIDGAARDVQAAINAARSLLPS 121 + +E+ M + G+ M+++SS GS + + FD + D D A VQ + A LLP Sbjct: 61 VTQIIEQNMKGLDGLIYMSATSSATGSAQLTLTFDNKTDPDIAQVQVQNKLQLASPLLPQ 120 Query: 122 SLKTLPTY-RKANPADAPILLLALTSKTVDKGKLYDLASSKLQQTIAQVQGVGQVSLMGS 180 ++ KA ++ ++DK + D ++ L +++V GVG + + GS Sbjct: 121 EVQRQGVVVSKAASGFLQVVGFVSEDGSMDKDDISDYVAANLVDPLSRVPGVGNIQVFGS 180 Query: 181 ALPAVRIELQPQQLSHYGISLDTVRQVVANATTNLPKGELQG------EGLHWWVDANGQ 234 ++RI L P +L Y ++ + + + G+L G + L+ + A + Sbjct: 181 KY-SMRIWLDPNKLDTYKLATTDIIATIRAQNAQVAVGQLGGAPSAPGQQLNATISAQDR 239 Query: 235 LTKASDYTNLVV-SYQNGAAVKLSDVARVYDSVQDQYVAGYFNDSPSVMMGITRSSGANM 293 L + +V+ S +G+ +KL D+ARV ++ +N P+ + I+ S+GAN Sbjct: 240 LQTPEQFRAIVIRSNPDGSTLKLGDIARVELGAENYETISRYNGKPATGVLISLSTGANA 299 Query: 294 LATIDAIKAQLPIMQKMLPKEVQLSLAMDRSPSIRGSLRETELTLLISTLLVIAVVFLFL 353 L T IK +L ++ P + + D +P I S++ +TLL + LV V++LF+ Sbjct: 300 LDTAVGIKNKLEELKPYFPAGLTAVVPFDTTPFISVSIKGVVVTLLEAIALVFLVMYLFM 359 Query: 354 RNARAVLIPAVALPISLIGTCAAMYLLGYSLDTLSLMALIIATGFVVDDAIVVLENISRH 413 +N RA LIP +A+P+ L+GT + LG+S++ L++ A+++A G +VDDAIVV+EN+ R Sbjct: 360 QNIRATLIPTIAVPVVLLGTFGILAALGFSINMLTMFAMVLAIGLLVDDAIVVVENVERI 419 Query: 414 L-EEGAPPLKAALDGSKEVGFTVLSMTASLIAVFLPILLMGSIVGRLFREFAVTLSVSLV 472 + EEG PL+A ++ ++ + L AVF+P+ +G G ++R+F T+ ++ Sbjct: 420 MTEEGLSPLEATRKSMDQITGALVGIALVLSAVFVPMAFLGGSTGIIYRQFTATIVSAMA 479 Query: 473 LSMIVSLTLTPMLCSRLLRAHKHDASGAPVQPNVFYRAIERVLNAVSDGYASSLEWVM-R 531 LS++V++ LTP LC+ +L+ K G + F+ R + S Y S + ++ R Sbjct: 480 LSVLVAVVLTPALCATMLKPVKKGEHG---KTTGFFAWFNRNFDRSSVKYQSGVRGILGR 536 Query: 532 HKRLTLLSLVLTVALNLFLFTAVQKGFFPDQDTGMLMGQMR----ADQAASFQSVHPQLL 587 KR + L L V + L LF + F P++D G+L ++ A Q + +++ Sbjct: 537 GKRFMAIFLALIVVMVL-LFVRLPSSFLPNEDQGILFSLIQTPVGATQERTLEAIKKVEH 595 Query: 588 AFSRLIQSDPDVASVMASTGGGAFG--SRNTANFFVSLKDSSQRKSTATEI---ANRLTR 642 F + + D + + G +F +N F+ LKD S+R S ++I A R Sbjct: 596 HF---LTDEKDAVESIFTVQGFSFAGTGQNNGMAFIKLKDWSERTSAESQIDAVAGRAMG 652 Query: 643 KASGVPGASLFLMAGQDLRMGGRSANATYQYSLQSDS---LDTLREWSPKVYAVLRKLPE 699 S + A F A + G +A + + L+ ++ D L + ++ + Sbjct: 653 AFSQIKDAFAFAFAPPAIPELGTAAG--FSFFLKDNANLGHDALVQARNQLLGAAAQSKL 710 Query: 700 LTSVDTDAQSGGQAVKLVIDRIAARRLGLEMTNIDDFLNNAFSQRQVATQYQALNQYYTI 759 L V + Q ++ ID A GL + +I+ L+ A+ + + Sbjct: 711 LAKVRPNGQEDSPQFRIDIDTQKASAQGLSIADINSTLSTAWGGQYIDDFIDRGRVKRVY 770 Query: 760 LGLAPQYTQDPEVLKQLFVLNSAGNAVPLSAFARLQSASAPLAVAHQNQSATTTIAFNLA 819 + + PE K V N+ G VP SAFA + + N + I A Sbjct: 771 MQADAPFRMVPEDFKLWSVRNNQGQMVPFSAFASARWEYGSPRLERYNGVSAMEIQGEAA 830 Query: 820 DGVSLQQAKAAIDAAVISLG-LPGSIHGGMQGTAQAFVA--MASAMPWLILAALLAVYIV 876 G+S + A++D G LP G++ TA ++ S L +LL V++ Sbjct: 831 PGIS---SGASMDEIERLAGQLPAGF--GIEWTALSYQERQAGSQTTLLYTLSLLIVFLC 885 Query: 877 LGMLYESWIHPITILSTLPSAGVGALLLLLATHTQFTVIALIGVLLLIGIVKKNAILMVD 936 L LYESW P +L P +GA+L + V + +L +G+ KNAIL+V+ Sbjct: 886 LAALYESWTIPTAVLLVAPLGILGAVLANTLAGMERDVYFQVAMLTTVGLTSKNAILIVE 945 Query: 937 FALHVERQHDWAAERAILEACRMRLRPILMTTMAAFFGALPMVLQTGGDAALRRPLGLTI 996 FA + A L+A R+RLRPI+MT++A G LP+ L +G + +R +G + Sbjct: 946 FA-KANLESGMELIDATLQAVRVRLRPIIMTSLAFGLGVLPLALASGAGSGAQRAIGTGV 1004 Query: 997 CGGLALSQLLTLYTTPVVYVYMDRMGSAAKRLWRRRRPRPSVP 1039 GG+ + LL ++ P+ +V ++R+ RP+PS P Sbjct: 1005 VGGMIVGTLLGIFFIPLFFVLVERL---------FMRPKPSAP 1038 >gi|134094822|ref|YP_001099897.1| RND divalent metal cation efflux transporter [Herminiimonas arsenicoxydans] Length = 1045 Score = 246 bits (627), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 251/1020 (24%), Positives = 437/1020 (42%), Gaps = 68/1020 (6%) Query: 24 LGALAYRMLPVAPLPQVDFPTIMVTASLAGASPETMAATIAAPLERAMGQIAGITEMTSS 83 LG Y+ LP+ +P + + + S G SP I P+E M + + + S Sbjct: 26 LGIYNYQKLPIDAVPDITNVQVQINTSAPGYSPLETEQRITFPIETVMAGLPNLEQTRSL 85 Query: 84 SSQGSTNVIVQFDLERDIDGAARDVQAAINAARSLLPSSLKTLPTYRKANPADAPILLLA 143 S G + V V F DI A + V I AR LP + P + I L Sbjct: 86 SRYGLSQVTVIFKDGTDIYFARQMVNERIQEARQNLPPGIA--PAMGPISTGLGEIYLWT 143 Query: 144 LTSKTVDK---GKLYDLASSK------LQQTIAQVQGVGQVSLMGSALPAVRIELQPQQL 194 + +K K G Y A + ++ + V GV +++ +G ++ P++L Sbjct: 144 VEAKEGAKKADGSAYTPADLREIQDWIIKPQLRNVSGVTEINSIGGFAKEYQVAPVPERL 203 Query: 195 SHYGISLDTVRQVVANATTNLPKGELQGEGLHWWVDANGQLTKASDYTNLVVSYQNGAAV 254 + YG+SL V + N+ G ++ G + A GQ+ D N+++ G A+ Sbjct: 204 ASYGLSLQDVVTALERNNGNVGAGYIEKRGEQLLIRAPGQVQSMDDIRNIILGNVQGVAI 263 Query: 255 KLSDVARVYDSVQDQYVAGYFNDSPSVMMGITRSSGANMLATIDAIKAQLPIMQKMLPKE 314 ++ DV V + + A N V+ + G N A+ ++ + + LP Sbjct: 264 RIRDVGEVEIGRELRTGAATENGREVVLGTVFMLIGQNSRTVSQAVDRKMVEINRTLPAG 323 Query: 315 VQLSLAMDRSPSIRGSLRETELTLLISTLLVIAVVFLFLRNARAVLIPAVALPISLIGTC 374 VQ DR+ + ++ + LL +LVIAV+F+FL N RA +I A+ +P+S++ T Sbjct: 324 VQAITVYDRTVLVDKAISTVKKNLLEGAVLVIAVLFIFLGNFRAAIITAMVIPLSMLFTF 383 Query: 375 AAMYLLGYSLDTLSLMALIIATGFVVDDAIVVLENISRHLEEGAPPLKAALD-------- 426 M S + +SL AL G +VD A+V++EN R L AL Sbjct: 384 TGMVNYHVSANLMSLGALDF--GIIVDGAVVIVENCVRRLAHAQAHHGRALTRTERFHEV 441 Query: 427 --GSKEVGFTVLSMTASLIAVFLPILLMGSIVGRLFREFAVTLSVSLVLSMIVSLTLTPM 484 +KE ++ ++AV+LPI + + GR+F A T+ ++LV +MI+S+T P Sbjct: 442 FAAAKEARRPLIFGQLIIMAVYLPIFALTGVEGRMFHPMAFTVVIALVGAMILSITFIPA 501 Query: 485 LCSRLLRAHKHDASGAPVQPNVFYRAIERVLNAVSDGYASSLEWVMRHKRLTLLSLVLTV 544 + + + R++ YAS+L+ VM +K + L + V Sbjct: 502 AIALFIGGKVEEKE-------------NRLMQQARTWYASALDSVMLNKPVVLTFAAVLV 548 Query: 545 ALNLFLFTAVQKGFFPDQDTGMLMGQ-MRADQAASFQSVHPQLLAFSRLIQSDPDVASVM 603 L+ L T + F P+ + G Q +R + QSV Q L + P++ + Sbjct: 549 VLSGLLATRMGSEFVPNLNEGDFAIQALRIPGTSLTQSVAMQQQLEKLLKEKHPEIERIF 608 Query: 604 ASTGGGAFGSR----NTANFFVSLKDSSQRKS---TATEIANRLTRKASGVPGASLFLMA 656 A TG S N ++ ++ LK Q T E+ + + + +PG++ Sbjct: 609 ARTGTAEIASDPMPPNISDGYIMLKPQDQWPEPVKTRDELLAVVQKTVASLPGSNYEFSQ 668 Query: 657 GQDLRM-----GGRSANATYQYSLQSDSLDTLREWSPKVYAVLRKLPELTSVDTDAQSGG 711 LR G RS A L D +D L + + KV AV+ K+P V + +G Sbjct: 669 PIQLRFNELISGVRSDVAV---KLFGDDMDVLNDTASKVAAVMGKIPGAAEVKVEQTTGL 725 Query: 712 QAVKLVIDRIAARRLGLEMTNIDDFLNNAFSQRQVATQYQALNQYYTILGLAPQYTQDPE 771 + + IDR R GL + ++ D + A ++ T +Q ++ I+ L D E Sbjct: 726 PMLTVNIDREKTARYGLNIADVQDTVATAIGGKEAGTLFQGDRRFNIIVRLPDHIRNDLE 785 Query: 772 VLKQLFV-----LNSAGNA--VPLSAFARLQSASAPLAVAHQNQSATTTIAFNLAD---G 821 +++L + S G +PL L A P ++ ++ I+ N+ G Sbjct: 786 AIRRLPISLPRAQGSEGRTSYIPLGEVVTLDVAPGPNQISREDGKRRIVISTNVRGRDIG 845 Query: 822 VSLQQAKAAIDAAV-ISLGLPGSIHGGMQGTAQAFVAMASAMPWLILAALLAVYIVLGML 880 + A+A I V I G + G + A + +P +L + ++ + G + Sbjct: 846 SFVADAEAKIRQQVNIPSGYWTTWGGQFEQLQSATQRLKIVIPVTLLLVFVLLFAMFGNI 905 Query: 881 YESWIHPITILSTLPSAGVGALLLLLATHTQFTVIALIGVLLLIGIVKKNAILMVDFALH 940 + + + S +P A G ++ L ++ A +G + L G+ N ++M+ F + Sbjct: 906 KDGLL----VFSGIPFALTGGIIALWLRDIPMSISAAVGFIALSGVAVLNGLVMISF-IR 960 Query: 941 VERQHDWAAERAILEACRMRLRPILMTTMAAFFGALPMVLQTGGDAALRRPLGLTICGGL 1000 R+ + E A+ + RLRP+LMT + A G +PM + TG A ++RPL + GG+ Sbjct: 961 SLREEGRSLEEAVRDGALTRLRPVLMTALVASLGFIPMAIATGTGAEVQRPLATVVIGGI 1020 Database: BlastDatabases/690/690 Posted date: Apr 9, 2011 4:48 AM Number of letters in database: 1,000,347 Number of sequences in database: 3295 Lambda K H 0.321 0.133 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3295 Number of Hits to DB: 1,591,829 Number of extensions: 57586 Number of successful extensions: 308 Number of sequences better than 1.0e-08: 10 Number of HSP's gapped: 237 Number of HSP's successfully gapped: 10 Length of query: 1043 Length of database: 1,000,347 Length adjustment: 91 Effective length of query: 952 Effective length of database: 700,502 Effective search space: 666877904 Effective search space used: 666877904 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 134 (56.2 bits)