BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2475.p
         (294 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094153|ref|YP_001099228.1| putative hydroxyacylglutathione...   105   3e-24

>gi|134094153|ref|YP_001099228.1| putative hydroxyacylglutathione
           hydrolase [Herminiimonas arsenicoxydans]
          Length = 249

 Score =  105 bits (261), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 128/267 (47%), Gaps = 44/267 (16%)

Query: 13  FDPATSTVSYLVLDRASGQCALIDSVLDYDPKSGRTATRSADQLIARVEALGARVQWILE 72
           F+P +ST +YL+ D  +G+  LID V+            + D+ +A V  LG  + + ++
Sbjct: 7   FEPLSSTYTYLLADEQTGRAILIDPVVS-----------TMDRDLAEVRRLGLTLAYTID 55

Query: 73  THAHADHLSAAPYLKQKLGGRIAIGEHIRQVQQVFGRLFNAGTEFEHDGSQFDHLFADGE 132
           TH HADH++AA  LK+ +G +IA   H R          + G E             +G+
Sbjct: 56  THIHADHVTAALELKRAVGSKIAAPAHDRLP------CIDLGIE-------------EGK 96

Query: 133 TFLIGQLPARVMHTPGHTPACLTYVVEAAGEIAAFVGDTLFMPDYGTARCDFPGGDARRL 192
            F +  +  + +HTPGHT    +Y+         F GD L +   G  R DF  GDA  L
Sbjct: 97  PFQVDGITLQPLHTPGHTDGHFSYLFND----RVFTGDALLIE--GCGRTDFQNGDADAL 150

Query: 193 YQSI-HAVLALPPATRLYMCHDYQPNGRELRFVTTVAEERQHNIHVHEGISEDDFVAMRS 251
           Y+S+   + ALP  T +Y  HDY+      RFV+++A+E+  N  +    + ++F  + +
Sbjct: 151 YKSVREKLFALPDETLVYPGHDYKQ-----RFVSSIAQEKARNPRLGGNKTLEEFKHIMA 205

Query: 252 ARDATLDMPVLLLPSVQVNMRAGQMPP 278
             +  L  P  +  +V  N + G  PP
Sbjct: 206 --NLNLPYPTFIDYAVPGNRQCGVCPP 230


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.322    0.137    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 600,382
Number of extensions: 24971
Number of successful extensions: 67
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 63
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 1,000,347
Length adjustment: 81
Effective length of query: 213
Effective length of database: 733,452
Effective search space: 156225276
Effective search space used: 156225276
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 128 (53.9 bits)