BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2242.p
         (127 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134096527|ref|YP_001101602.1| diaminobutyrate--2-oxoglutarate...    95   1e-21
gi|134095913|ref|YP_001100988.1| glutamate-1-semialdehyde aminot...    52   8e-09

>gi|134096527|ref|YP_001101602.1| diaminobutyrate--2-oxoglutarate
           aminotransferase [Herminiimonas arsenicoxydans]
          Length = 431

 Score = 95.1 bits (235), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 71/115 (61%), Gaps = 2/115 (1%)

Query: 12  DIEGRVFIDCLAGAGTLALGHNHPAVIEAIVPLLHEGAALHTLDLTTPVKDRFMQDLLE- 70
           D  G  +ID LAGAGTL  GHN+P + +A++  L E   +H LD+ T  K  F+Q     
Sbjct: 32  DEGGNTYIDFLAGAGTLNYGHNNPVMKQAVIEYLAEDGIVHGLDMATSAKKAFLQTFESH 91

Query: 71  ILPPEFARQARIQFCGPTGADAIEAALKLVKSATGGGTVLAFQGAYHGMTQGGAA 125
           +L P  + Q ++QF GPTG +A+EAA+KL ++ TG   V++F   +HG++ G  A
Sbjct: 92  VLKPR-SMQYKLQFTGPTGTNAVEAAIKLARNVTGRQMVISFTNGFHGVSLGSLA 145


>gi|134095913|ref|YP_001100988.1| glutamate-1-semialdehyde
           aminotransferase [Herminiimonas arsenicoxydans]
          Length = 428

 Score = 52.4 bits (124), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 10/108 (9%)

Query: 12  DIEGRVFIDCLAGAGTLALGHNHPAVIEAIVPLLHEGAALHTLDLTTPVKDRF-MQDLLE 70
           D + R +ID +   G   +GH HP V++A+     + AA   L    P +    M +L+ 
Sbjct: 47  DADDRRYIDYIGSWGPAIVGHAHPDVVKAV-----QDAATRGLSFGAPTEGEIRMAELIC 101

Query: 71  ILPPEFARQARIQFCGPTGADAIEAALKLVKSATGGGTVLAFQGAYHG 118
            L P    Q R+     +G +A  +AL+L + ATG  T++ F+G YHG
Sbjct: 102 QLVPSI-EQVRLV---SSGTEAAMSALRLARGATGRDTIIKFEGCYHG 145


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.323    0.140    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 263,501
Number of extensions: 10412
Number of successful extensions: 35
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 34
Number of HSP's successfully gapped: 2
Length of query: 127
Length of database: 1,000,347
Length adjustment: 72
Effective length of query: 55
Effective length of database: 763,107
Effective search space: 41970885
Effective search space used: 41970885
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 123 (52.0 bits)