BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2206.p
         (2314 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095263|ref|YP_001100338.1| 3-oxoacyl-[acyl-carrier-protein...    97   1e-20
gi|134096036|ref|YP_001101111.1| 3-oxoacyl-(acyl carrier protein...    83   1e-16

>gi|134095263|ref|YP_001100338.1| 3-oxoacyl-[acyl-carrier-protein]
           synthase II [Herminiimonas arsenicoxydans]
          Length = 413

 Score = 96.7 bits (239), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 84/287 (29%), Positives = 135/287 (47%), Gaps = 25/287 (8%)

Query: 167 DYLATRVSYKLNLTGPSLTVQTACSSSLVAVHMACEQLVSGECDMALAGG-------VGL 219
           + ++  +S    L GP++ V TAC++ L ++  A   +  G+ D+ +AGG       +GL
Sbjct: 144 NMISGHLSIIYGLKGPNMAVVTACTTGLHSIGTAGRMIEYGDADVMIAGGAESTISPLGL 203

Query: 220 S-FPQESGYLHRDGMIFSAQGQCRPFDAQADGVTIGNGAGVVLLKPLQRALADGDPILAV 278
             F        R+    +A    RP+D   DG  +G GAGV++L+  + A A G  I A 
Sbjct: 204 GGFASARALSSRNDDPTTAS---RPWDKDRDGFVLGEGAGVMVLEEYEHAKARGAKIYAE 260

Query: 279 IRGSAINNDGQRKAGFTAPSVEGQQAVITEALSLAAVSPADIGLVEAHGTGTPLGDPIEV 338
           + G  ++ D       TAP+++G +  +  AL  A ++   +  + AHGT TPLGD  E 
Sbjct: 261 LVGFGMSGDAYH---ITAPNMDGPRRSMANALKSAEIAADQVQYLNAHGTSTPLGDKNET 317

Query: 339 RALTQAWRPHTSAAQYCALGSVKSNLGHLDTAAGIASLLKAALAVHHAHIPPSLGVETPN 398
            A+  A+  H   A+   + S KS  GHL   AG    +   LA+HH   PP++ +   +
Sbjct: 318 DAVKAAFGAH---AKKLTVNSTKSMTGHLLGGAGGLESVFTVLALHHQISPPTINILNQD 374

Query: 399 PAIDWQDSPFYVPPVLLPWPDSQTPRRAGVSSFAIGGTNCHVVLEEA 445
           P  D      Y        P     + A  ++F  GGTN  ++  +A
Sbjct: 375 PECDLD----YCANTAREMP----MQYAMKNNFGFGGTNGTLIFGKA 413


>gi|134096036|ref|YP_001101111.1| 3-oxoacyl-(acyl carrier protein)
           synthase I [Herminiimonas arsenicoxydans]
          Length = 396

 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 123/292 (42%), Gaps = 29/292 (9%)

Query: 155 PLTFQRLIGNDKDYLATRVSYKLNLTGPSLTVQTACSSSLVAVHMACEQLVSGECDMALA 214
           P  F     ++   +A  VS  L LTGP+LTV +ACSSS      A   + +G  D A+ 
Sbjct: 126 PADFHYTQTHNTYSVAAYVSALLGLTGPALTVSSACSSSAKVFGNAARMIEAGLIDAAVV 185

Query: 215 GGV-GLSFPQESGYLHRDGMIFSAQGQCRPFDAQADGVTIGNGAGVVLLKPLQRALADGD 273
           GGV  L      G+   + +   A    +P+    +G++I  GA  VLL     A A G 
Sbjct: 186 GGVDSLCLTTLYGF---NSLQLLAPLPAQPYGEGRNGISIAEGAAFVLLTKPASAPAAGT 242

Query: 274 PILAVIRGSAINNDGQRKAGFTAPSVE--GQQAVITEALSLAAVSPADIGLVEAHGTGTP 331
            +L    G   ++D       ++P  E  G Q  +  AL  A +    IG +  HGT TP
Sbjct: 243 ILL---HGVGESSDAHH---MSSPHPEGLGAQMAMYAALQAAGIQAEQIGYINLHGTATP 296

Query: 332 LGDPIEVRALTQAWRPHTSAAQYCALGSVKSNLGHLDTAAGIASLLKAALAVHHAHIPPS 391
             D  E +A+      H       A  S K   GH   AAG    +   +A+ H  +P  
Sbjct: 297 SNDAAEGKAV------HAVFGNTTACSSTKGATGHTLGAAGGVEAIICVMAMQHGVMPAG 350

Query: 392 LGVETPNPAIDWQDSPFYVPPVLLPWPDSQTPRRAGV-SSFAIGGTNCHVVL 442
           +  +  +P +D      YV        +   P    V +SF  GG+NC +VL
Sbjct: 351 INTKKVDPGLDVD----YV------LSNRSEPIHYAVNNSFGFGGSNCSLVL 392


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.320    0.133    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 4,031,650
Number of extensions: 154656
Number of successful extensions: 492
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 485
Number of HSP's successfully gapped: 2
Length of query: 2314
Length of database: 1,000,347
Length adjustment: 97
Effective length of query: 2217
Effective length of database: 680,732
Effective search space: 1509182844
Effective search space used: 1509182844
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 137 (57.4 bits)