BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2085.p
         (232 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094953|ref|YP_001100028.1| multifunctional: acyl-CoA thioe...   248   2e-67

>gi|134094953|ref|YP_001100028.1| multifunctional: acyl-CoA
           thioesterase I; protease I; lysophospholipasel(I)
           [Herminiimonas arsenicoxydans]
          Length = 216

 Score =  248 bits (632), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 119/188 (63%), Positives = 151/188 (80%)

Query: 42  ATSAYSAPKNLLVLGDSLSAEYGLQRGSGWTTLLQQRLQQDKSGFQVVNASISGDTTIGG 101
           ATSAYSA K +LVLGDSLSAEYGL RG GW  LLQ++L  +K    +VNASISG+TT GG
Sbjct: 25  ATSAYSASKTILVLGDSLSAEYGLARGEGWVNLLQKKLATEKISASIVNASISGETTSGG 84

Query: 102 RNRLPALMTQHKPAVLVIELGANDALRGLPLKTSQDNLQAMIDLARAQKAKVLLVGMQIP 161
           + RLP+L+ +H+PA++VIELGANDALRGL L  +Q+NL+AMI  A+A KAK+LL+GMQIP
Sbjct: 85  KARLPSLLIKHQPAIVVIELGANDALRGLSLAATQENLRAMIKSAKAAKAKILLIGMQIP 144

Query: 162 PNYGPDYTRRFAAMYQDLAKANKLALVPFFFEGIAADLSQFQADRIHPNEQAQPRLLDNV 221
           PNYG DYT++F+A++  LA+  K +LVPF  +G+A     FQADRIHP+ +A PR+LDN+
Sbjct: 145 PNYGSDYTKQFSALFPKLAQETKSSLVPFMLQGVAEKPELFQADRIHPSAEAHPRILDNI 204

Query: 222 WPYLKPLL 229
           WP LKPLL
Sbjct: 205 WPQLKPLL 212


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.319    0.135    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 402,952
Number of extensions: 14455
Number of successful extensions: 49
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 49
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 1,000,347
Length adjustment: 79
Effective length of query: 153
Effective length of database: 740,042
Effective search space: 113226426
Effective search space used: 113226426
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 127 (53.5 bits)