BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2069.p
         (301 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094321|ref|YP_001099396.1| nicotinate-nucleotide pyrophosp...   409   e-115

>gi|134094321|ref|YP_001099396.1| nicotinate-nucleotide
           pyrophosphorylase [Herminiimonas arsenicoxydans]
          Length = 290

 Score =  409 bits (1050), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 219/286 (76%), Positives = 248/286 (86%)

Query: 15  SNLRNPFGPFDAALHAAFDANVNQAIAEDVGDCDYTGLLVPENEFVKARVIVREVAVLCG 74
           S LRNPF PFDAAL AAF+ N+  A+AEDVG  D TG LVPE+E V+ARVIVRE AVLCG
Sbjct: 2   SLLRNPFAPFDAALTAAFEDNIVTALAEDVGSGDVTGKLVPEHEIVQARVIVREAAVLCG 61

Query: 75  APWFEAVMTRLDPRLQVSWAYAEGDLMAADSQVCSIEGPARALLTAERGALNFLQLLSGV 134
           APWFEAVM ++D R+++ W YAEG LM ADS+VC+IE PARALLTAER ALNFLQLLSGV
Sbjct: 62  APWFEAVMKQVDARIRIEWRYAEGALMQADSEVCAIEAPARALLTAERTALNFLQLLSGV 121

Query: 135 ATATRRYVEVVQGTGAAILDTRKTLPGLRLAQKYAVRVGGGANQRLALYDGILIKENHIA 194
           ATATR YVE++ GT AAILDTRKTLPGLRLAQKYAVRVGGG NQRLALYDGILIKENHIA
Sbjct: 122 ATATRAYVELIAGTKAAILDTRKTLPGLRLAQKYAVRVGGGKNQRLALYDGILIKENHIA 181

Query: 195 AAGGITAAVAAALKLNAGVSIQVEVESIAELDEALQAGAQSILLDNFSLEMMRQAVALNA 254
           AAGG+TAA+ AAL L AGV+IQ+EVE++A+L+ AL AGAQS+LLDNFSL  MR AV L  
Sbjct: 182 AAGGVTAAMQAALALQAGVTIQIEVENLAQLEAALAAGAQSVLLDNFSLSDMRTAVVLTN 241

Query: 255 GRALLEASGGINMQTVRAIAETGVDRISIGSLTKDIQATDFSLRVI 300
           GRALLEASGG+N  +VRAIAETGVDRISIG LTKD++ATD+SLR+I
Sbjct: 242 GRALLEASGGVNRDSVRAIAETGVDRISIGGLTKDVRATDYSLRII 287


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.319    0.132    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 489,304
Number of extensions: 17807
Number of successful extensions: 78
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 78
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 1,000,347
Length adjustment: 81
Effective length of query: 220
Effective length of database: 733,452
Effective search space: 161359440
Effective search space used: 161359440
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 128 (53.9 bits)