BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2068.p
         (364 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094320|ref|YP_001099395.1| quinolinate synthetase [Hermini...   617   e-178

>gi|134094320|ref|YP_001099395.1| quinolinate synthetase
           [Herminiimonas arsenicoxydans]
          Length = 379

 Score =  617 bits (1591), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 301/364 (82%), Positives = 323/364 (88%)

Query: 1   MESGGSCTANAWAKVPATPSPEERAQLKARIRQLLKEKQAVLVAHYYVDGDLQDLAEETG 60
           MESG SC A+AWA+ PATPSPEE+  LK RIR LLKE++AVLVAHYYVD DLQDLAEETG
Sbjct: 16  MESGSSCVAHAWARTPATPSPEEKIALKDRIRHLLKEREAVLVAHYYVDADLQDLAEETG 75

Query: 61  GCVSDSLEMARFGRDHAAQTLVVAGVRFMGETAKILSPEKRILMPDLDATCSLDLGCPAD 120
           GCVSDSLEMARFGRDH A+TLVVAGV+FMGETAKILSPEK ILMPDLDATCSLDLGCP D
Sbjct: 76  GCVSDSLEMARFGRDHPAKTLVVAGVKFMGETAKILSPEKTILMPDLDATCSLDLGCPVD 135

Query: 121 EFAAFCDQHPDRTVVVYANTSAAVKARADWMVTSGIGLEIVQHLHAQGKKILWAPDKHLG 180
           EF AFCD HPDR VVVYANTSAAVKARADWMVTS IGL+IV+HLH QGKKILWAPDKHLG
Sbjct: 136 EFHAFCDAHPDRVVVVYANTSAAVKARADWMVTSSIGLKIVEHLHVQGKKILWAPDKHLG 195

Query: 181 SYIQKQTGADMLLWQGSCLVHDEFKGVELELMRAEHPDALVLVHPESPEAVVAQADVIGS 240
            YIQKQTGADMLLWQGSCLVHDEFK VELEL++ EHP A VLVHPESP AVVA AD +GS
Sbjct: 196 GYIQKQTGADMLLWQGSCLVHDEFKAVELELLKKEHPLAKVLVHPESPAAVVALADAVGS 255

Query: 241 TSQLIAAVQNSAAPAFIVATDNGILHKMRMAAPDKRFIDAPTAGNSATCKSCAHCPWMAM 300
           TSQLI A Q   AP FIVATDNGILHKM+MAAP K FIDAPTAGNSATCKSCAHCPWMAM
Sbjct: 256 TSQLIHAAQTMDAPEFIVATDNGILHKMKMAAPGKIFIDAPTAGNSATCKSCAHCPWMAM 315

Query: 301 NGLQNLLHVLETGANEIHVDPAVGKQAVLCIDRMLDFAAQRKAKVRPSARLEDEQQLFAG 360
           NGLQNLL VLE+G NEIHVDP +G++A +CIDRMLDFAA +KA VRPS+ L  EQ+LF+G
Sbjct: 316 NGLQNLLDVLESGRNEIHVDPEIGRKATVCIDRMLDFAAAQKANVRPSSDLAKEQKLFSG 375

Query: 361 IGPA 364
           IGPA
Sbjct: 376 IGPA 379


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.319    0.132    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 714,612
Number of extensions: 28924
Number of successful extensions: 99
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 97
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 1,000,347
Length adjustment: 83
Effective length of query: 281
Effective length of database: 726,862
Effective search space: 204248222
Effective search space used: 204248222
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 129 (54.3 bits)