BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2043.p
         (391 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094573|ref|YP_001099648.1| tetraacyldisaccharide-1-P synth...   537   e-154

>gi|134094573|ref|YP_001099648.1| tetraacyldisaccharide-1-P synthase
           [Herminiimonas arsenicoxydans]
          Length = 393

 Score =  537 bits (1383), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 264/391 (67%), Positives = 314/391 (80%)

Query: 1   VASSADITRRQSIALVAGESSGDLLGSRLLAGVRERLPEVRLHGIGGEHMMAQGFTSDWP 60
           +ASSAD+  R +IA+VAGE+SGDLL  RLL+G+R +LP+  +HGIGG +M   GF SD+P
Sbjct: 1   MASSADLAGRTAIAMVAGETSGDLLAGRLLSGLRPQLPDALMHGIGGPNMAQHGFVSDFP 60

Query: 61  MDKLTVRGLFEVIPRYREIKGIQDALRDKLLADRPDVFVGVDYPGFNLGLEEQLKKAGIP 120
           M+KL+VRGLFEV+  YREIKGIQ ALRD+LLA+RP VF+GVD P FNLGLE QLK AGIP
Sbjct: 61  MEKLSVRGLFEVLAHYREIKGIQIALRDQLLAERPAVFIGVDAPDFNLGLEAQLKSAGIP 120

Query: 121 TIHFIGPQIWAWRGWRIKKIQRAVSHMLVIFPFEESIYRQAGVPVTYVGHPLAEVIPLQP 180
           T+HFIGP IWAWRG RIKKI RAVSHMLVIFPFEE +YRQAG+P TYVGHPLA+VIP++P
Sbjct: 121 TMHFIGPSIWAWRGGRIKKIARAVSHMLVIFPFEEELYRQAGIPATYVGHPLAQVIPMEP 180

Query: 181 DTPGARQRLGLTGPGRVVAILPGSRMSELKQNGEGFLAAARLLQQRDGQLQFVTPMAGER 240
           D   AR  L L     VVA+LPGSRMSELK N   F+AAA+LL QRD  LQFV PMAGE 
Sbjct: 181 DQAAARVALDLPVHAPVVALLPGSRMSELKYNAVAFVAAAKLLLQRDSSLQFVAPMAGEA 240

Query: 241 QMAFFEEQIRQGGYEDLGISVIRGQSHSAMEASDAVLVASGTASLEVALYKKPMVISYKV 300
           Q  +F E I Q G +D+ I VI GQSH A+ A+DAV+VASGTASLEVAL+KKPMVI+YK+
Sbjct: 241 QHRYFNELIAQAGLQDVQIKVIDGQSHRALAAADAVMVASGTASLEVALFKKPMVIAYKM 300

Query: 301 NWASYQIMRHMAYQPWVGLPNILAREFLVPELLQHQATPQALADAMWFQLEDHAHQQRLA 360
             AS+ ++RHM YQPW+GLPNILA+EFLVPELLQ  ATPQALADA+W QL+D AH+ RL 
Sbjct: 301 MRASWYVLRHMGYQPWIGLPNILAQEFLVPELLQDAATPQALADALWQQLQDGAHRDRLQ 360

Query: 361 RRFADLHQSLLRDTSRESANAVCEVMGARRR 391
           RRF ++H +LLRDT+ ESA AV E++    R
Sbjct: 361 RRFTEMHHTLLRDTAGESARAVLELIAQSPR 391


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.322    0.137    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 791,949
Number of extensions: 34961
Number of successful extensions: 85
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 85
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 1,000,347
Length adjustment: 84
Effective length of query: 307
Effective length of database: 723,567
Effective search space: 222135069
Effective search space used: 222135069
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 130 (54.7 bits)