BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2042.p
         (262 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094572|ref|YP_001099647.1| UDP-N-acetylglucosamine acyltra...   426   e-121

>gi|134094572|ref|YP_001099647.1| UDP-N-acetylglucosamine
           acyltransferase [Herminiimonas arsenicoxydans]
          Length = 262

 Score =  426 bits (1096), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 202/262 (77%), Positives = 227/262 (86%)

Query: 1   MSKIHPSAVIAPGAQIDDSVEIGAYAVIGPDVRIGAGTRIGPHVVIEGHTRIGRDNEIFQ 60
           MS IH +A++ P AQ+D SVE+GAY+VIGP V+I AG++IGPHVV+EGHT IGRDN IFQ
Sbjct: 1   MSLIHSTAIVDPKAQLDTSVEVGAYSVIGPHVKIDAGSKIGPHVVVEGHTTIGRDNTIFQ 60

Query: 61  FASIGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQDAGATRIGNDNWIMAYVHLA 120
           FASIGAAPQDKKYAGEPT + IGDRNTIREFVT N GT QDA  TR+G+DNWIMAYVH+A
Sbjct: 61  FASIGAAPQDKKYAGEPTQLSIGDRNTIREFVTINLGTTQDANITRLGSDNWIMAYVHIA 120

Query: 121 HDCQLGSHIILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPF 180
           HDCQLG +IILANNATLAGHVHL D VFLGGFT+VHQFC IGAHAMTAFTAAVSQD+PPF
Sbjct: 121 HDCQLGDNIILANNATLAGHVHLEDWVFLGGFTSVHQFCRIGAHAMTAFTAAVSQDIPPF 180

Query: 181 VTAAGNRAVPSGINSEGLRRRGFSSEQIMEIKRAYKVIYRAGLPLEEAKQQLAEMEAKSA 240
           VTAAGNRAVP+GINSEGL+RRGFSSEQIM IKR YK+IYR+ LPLEEAK  L   E KS+
Sbjct: 181 VTAAGNRAVPAGINSEGLKRRGFSSEQIMAIKRGYKIIYRSNLPLEEAKAALLAEENKSS 240

Query: 241 HSAEHIRLLREFIEASARGIIR 262
            +A ++R LR FIE S RGIIR
Sbjct: 241 DAAPYLRQLRTFIETSPRGIIR 262


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.321    0.136    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 505,618
Number of extensions: 21452
Number of successful extensions: 73
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 64
Number of HSP's successfully gapped: 2
Length of query: 262
Length of database: 1,000,347
Length adjustment: 80
Effective length of query: 182
Effective length of database: 736,747
Effective search space: 134087954
Effective search space used: 134087954
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 128 (53.9 bits)