BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2012.p
         (296 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094545|ref|YP_001099620.1| N5-glutamine S-adenosyl-L-methi...   494   e-141
gi|134093471|ref|YP_001098546.1| protein methyltransferase HemK ...    77   1e-15

>gi|134094545|ref|YP_001099620.1| N5-glutamine
           S-adenosyl-L-methionine-dependent methyltransferase
           [Herminiimonas arsenicoxydans]
          Length = 296

 Score =  494 bits (1273), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 231/292 (79%), Positives = 264/292 (90%)

Query: 3   PNNFSTVRDLLRYAVTRFNTEQLFFGHGSSNALDEAAYLILHTLKLPLDQLDPFLDARLL 62
           PN+ ST+RDLLRYAVTRFNT +LFFGHGS+NALDEAAYLILHTLKLPLD+LDPF DA LL
Sbjct: 5   PNDLSTIRDLLRYAVTRFNTAKLFFGHGSTNALDEAAYLILHTLKLPLDKLDPFFDAHLL 64

Query: 63  PEEIASIMRVIERRSKDRVPAAYITNEAWLGAYRFYVDERVIVPRSFIAELIPQHFSPWI 122
             E+ +++RVIE+R+ +R+PAAYITNE WLG Y FYVDERVIVPRSFIAELIP  FSPW+
Sbjct: 65  QHEVDAVLRVIEQRADERLPAAYITNEGWLGGYHFYVDERVIVPRSFIAELIPDQFSPWV 124

Query: 123 QDPEAIENALDLCTGSGCLPILLADAFPNAQIDAVDISADALAVARKNVDEYQLQDRINL 182
            +P+ I N L+LCTGSGCLPI+LADAFPNAQ+DAVDISADALAVAR+NVDEY+LQDRI L
Sbjct: 125 SNPDKITNILELCTGSGCLPIMLADAFPNAQVDAVDISADALAVARRNVDEYELQDRITL 184

Query: 183 VQSDLYTQLPLRKYDLIISNPPYVNSGSMAKLPQEYLREPQLALAGGEDGMDLVRKIVAG 242
           ++SDLYT +P  KYDLII+NPPYVNS SM KLP EYLREP +ALAGG+DGMDLVRKIVAG
Sbjct: 185 IESDLYTHVPENKYDLIITNPPYVNSTSMGKLPPEYLREPHIALAGGDDGMDLVRKIVAG 244

Query: 243 AAERLTPEGVLVVEIGNERAFAEAAFPELELTWLTTSAGDDMVFLVTAEQLQ 294
           A +RLTP G+L+VEIGNERA+AEAAFP+L LTWLTTSAGDDMVFLVTA+QLQ
Sbjct: 245 AGKRLTPNGLLMVEIGNERAYAEAAFPKLNLTWLTTSAGDDMVFLVTADQLQ 296


>gi|134093471|ref|YP_001098546.1| protein methyltransferase HemK
           [Herminiimonas arsenicoxydans]
          Length = 276

 Score = 76.6 bits (187), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 124/249 (49%), Gaps = 22/249 (8%)

Query: 37  EAAYLILHTLKLPLDQLDPFLDARLLPEEIASIMRVIERRSKDRVPAAYITNEAWLGAYR 96
           EA  LI H  +L   QL    +  L   E   +  +  RR     P AY+  E       
Sbjct: 23  EARMLIGHVTQLSRVQLITNAERVLNAAEAQQLATLFARRMAGE-PMAYLLGEREFYGLS 81

Query: 97  FYVDERVIVPR---SFIAELIPQHFSPWIQDPEAIENALDLCTGSGCLPILLADAFPNAQ 153
           F V   V++PR     + EL  Q        P+     LD+ TGSG + I +A A P+A 
Sbjct: 82  FQVSPAVLIPRPDTELLVELALQRL------PQQ-GRVLDMGTGSGAIAIAIAHARPDAV 134

Query: 154 IDAVDISADALAVARKNVDEYQLQDRINLVQSDLYTQLPLRKYDLIISNPPYVNSGSMAK 213
           + A+D+S  ALAVA  N   ++   R+  ++SD +  L  R++DLI+SNPPY+ +G    
Sbjct: 135 VTALDVSEAALAVASANAHRHKA--RVECLRSDWFAALDGRQFDLIVSNPPYIVAGDR-H 191

Query: 214 LPQEYLR-EPQLALAGGEDGMDLVRKIVAGAAERLTPEGVLVVEIGNERA------FAEA 266
           L +  LR EP  AL+   DG+  +R I   AA+ L+ +G L++E G ++A       AE 
Sbjct: 192 LSEGDLRFEPIDALSDHADGLSALRIISEHAADHLSDDGWLLMEHGYDQAAAVRGLLAEN 251

Query: 267 AFPELELTW 275
            F E++ +W
Sbjct: 252 GFGEVQ-SW 259


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.320    0.137    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 550,973
Number of extensions: 22238
Number of successful extensions: 75
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 74
Number of HSP's successfully gapped: 2
Length of query: 296
Length of database: 1,000,347
Length adjustment: 81
Effective length of query: 215
Effective length of database: 733,452
Effective search space: 157692180
Effective search space used: 157692180
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 128 (53.9 bits)