BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1934.p
         (335 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095341|ref|YP_001100416.1| low-affinity inorganic phosphat...   520   e-149

>gi|134095341|ref|YP_001100416.1| low-affinity inorganic phosphate
           transporter [Herminiimonas arsenicoxydans]
          Length = 335

 Score =  520 bits (1339), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 266/336 (79%), Positives = 303/336 (90%), Gaps = 2/336 (0%)

Query: 1   MQTIQISLHILALLIVLALLFDFMNGFHDAANAIATVVSTGVLRPQTAVAMAAFFNLAAV 60
           MQT+ +SL++LA LI+LAL+FDFMNGFHDAANAIATVVSTGVL+PQTAV MAAFFN  A+
Sbjct: 1   MQTLHMSLYVLAFLIILALIFDFMNGFHDAANAIATVVSTGVLKPQTAVMMAAFFNFIAI 60

Query: 61  FVFHQLHVAASVGKGTIDPAIVDQYVIFGALIGAIFWNLVTWYYGIPSSSSHALIGGLVG 120
            VFH L VA ++G GTIDP ++D YV+FGAL+GAI WN++TWY+G+PSSSSHALIGGLVG
Sbjct: 61  GVFH-LKVAMTIGTGTIDPIVIDHYVVFGALVGAIVWNVLTWYFGLPSSSSHALIGGLVG 119

Query: 121 SAVAKAGTGALISAGLLKTILFIVLSPLLGLVFGSLMMLAVSWIFYRSTPRKIDGWFRRL 180
           +AVAKAGT ALIS+GL+K I FIVLSPLLG +FGSLMM+ VSW+F RSTPR +D WFRRL
Sbjct: 120 AAVAKAGTDALISSGLIKIIAFIVLSPLLGFLFGSLMMVLVSWLFVRSTPRNVDRWFRRL 179

Query: 181 QLLSASMYSLGHGGNDAQKTIGIIWMLLIASGYSSPEAP-PMWVIICCYCAISLGTLFGG 239
           QL SA+MYSLGHGGNDAQKT+GIIWMLLIA+G S+   P P WVII CY AISLGTLFGG
Sbjct: 180 QLFSAAMYSLGHGGNDAQKTMGIIWMLLIAAGVSTAAEPLPWWVIISCYTAISLGTLFGG 239

Query: 240 WRIVKTMGQKITKLKPVGGFCAETGGAITLFIATALGIPVSTTHTITGAIVGVGAAQKMS 299
           WRIVKTMGQKITKLKPVGGFCAETGGAITLF+ATALG+PVSTTHTITGAIVGVGA++KMS
Sbjct: 240 WRIVKTMGQKITKLKPVGGFCAETGGAITLFLATALGVPVSTTHTITGAIVGVGASRKMS 299

Query: 300 AVRWGVASNIVWAWIFTIPASAFVAAIAWWVGVHVL 335
           AVRWGVA NIVWAWIFTIPA+AF+AAIAWW+G  +L
Sbjct: 300 AVRWGVAGNIVWAWIFTIPAAAFMAAIAWWLGTMIL 335


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.328    0.139    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 636,323
Number of extensions: 26678
Number of successful extensions: 153
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 147
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 1,000,347
Length adjustment: 82
Effective length of query: 253
Effective length of database: 730,157
Effective search space: 184729721
Effective search space used: 184729721
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 129 (54.3 bits)