BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1869.p
         (175 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134093968|ref|YP_001099043.1| putative O-acetyltransferase [H...   236   7e-64
gi|134094505|ref|YP_001099580.1| serine acetyltransferase [Hermi...    80   8e-17

>gi|134093968|ref|YP_001099043.1| putative O-acetyltransferase
           [Herminiimonas arsenicoxydans]
          Length = 176

 Score =  236 bits (601), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 114/169 (67%), Positives = 133/169 (78%)

Query: 3   QDPDWQADLARYNLPRPFLKEQSIWAIWVYRWGRRIEARPAGLMRKLQNTLYWPLFRLTE 62
           QD DWQAD+ RY L RPFLKEQSIWA+W YR+GRR++   +GL +K+  + YW  FRL E
Sbjct: 6   QDSDWQADVQRYGLRRPFLKEQSIWAVWSYRFGRRVDRMQSGLAKKVLTSFYWLWFRLLE 65

Query: 63  TAFGISLPRGARIGPGLRIWHFGNIFVNEQAVIGARCTLRQGVTIGNRHADGPSPVIGND 122
           TA GISLP+ A IGPGLRIWHFG IF++    IGA CTLRQGVTIGNR ADGP PVIG+D
Sbjct: 66  TAVGISLPKAAVIGPGLRIWHFGGIFLHPDVRIGANCTLRQGVTIGNRVADGPVPVIGDD 125

Query: 123 VELGAYAQVLGGIHLGDGCKIGAMSVVLHDVPPGATVVGAPARVVSTVG 171
           V+ GAYAQVLGG+ +G+GC IGA+SVVL DVP GAT VG PARV+   G
Sbjct: 126 VDFGAYAQVLGGVRIGNGCHIGALSVVLCDVPDGATAVGVPARVILKSG 174


>gi|134094505|ref|YP_001099580.1| serine acetyltransferase
           [Herminiimonas arsenicoxydans]
          Length = 247

 Score = 79.7 bits (195), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 46/105 (43%), Positives = 65/105 (61%), Gaps = 3/105 (2%)

Query: 66  GISLPRGARIGPGLRIWHFGNIFVNEQAVIGARCTLRQGVTIGNRHADGPS---PVIGND 122
           GI +  GA+IG  + I H   + + E A IG  CT+ QGVT+G       +   P +GN 
Sbjct: 65  GIEIHPGAKIGRRVFIDHGFGVVIGETAEIGDDCTIYQGVTLGGTSLSKGAKRHPTLGNG 124

Query: 123 VELGAYAQVLGGIHLGDGCKIGAMSVVLHDVPPGATVVGAPARVV 167
           V +GA AQVLG   +G+G K+G+ +VV+ +VP GAT VG PAR++
Sbjct: 125 VIIGAGAQVLGAFTVGEGAKVGSNAVVVKEVPAGATAVGNPARII 169


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.324    0.142    0.467 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 390,847
Number of extensions: 16859
Number of successful extensions: 39
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 36
Number of HSP's successfully gapped: 2
Length of query: 175
Length of database: 1,000,347
Length adjustment: 76
Effective length of query: 99
Effective length of database: 749,927
Effective search space: 74242773
Effective search space used: 74242773
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 125 (52.8 bits)