BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1831.p
         (288 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095009|ref|YP_001100084.1| putative hydrolase protein [Her...   409   e-116
gi|134095366|ref|YP_001100441.1| putative hydrolase protein [Her...    73   2e-14

>gi|134095009|ref|YP_001100084.1| putative hydrolase protein
           [Herminiimonas arsenicoxydans]
          Length = 288

 Score =  409 bits (1051), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 193/288 (67%), Positives = 227/288 (78%)

Query: 1   MTEAVVKTVQCISPAGLHTMAYKEWGDARNPNVLVCVHGVTRVSDDFDRMARELCDTYRV 60
           MT   +KTVQC+SPAGLH MAYKEWGD  NP VL+CVHG+TRVSDDFD +A+ L   YRV
Sbjct: 1   MTHTQIKTVQCLSPAGLHRMAYKEWGDPANPKVLICVHGLTRVSDDFDALAQALSHDYRV 60

Query: 61  ICPDVVGRGRSGRLANPQFYTVPQYVADMVTLLARADAEIVDWFGTSMGGLIGMGLASLP 120
           +CPDVVGRGRS  L +PQ+Y VPQYV+DMVTL+AR D E V W GTSMGG+IGM LASLP
Sbjct: 61  VCPDVVGRGRSEHLRDPQYYQVPQYVSDMVTLIARLDVESVHWLGTSMGGVIGMVLASLP 120

Query: 121 GNPIRRLVLNDIGPSINGAALARIGEYIGQDVRFDTFEEAAQYIRTISASFGHHSDEEWH 180
             PIR+L+LNDIGP+I+  ALARIGEY+GQDVRF +F+EA QY+R IS SFG HS+E+W 
Sbjct: 121 DTPIRKLLLNDIGPAIDAQALARIGEYVGQDVRFASFDEAWQYVRAISLSFGAHSEEQWR 180

Query: 181 KLAKDVLRQNEEGKWVRHYDLGLAVPFKLTTPEAASAAEQMLWAAYDAIRCPTLLVRGAQ 240
           KLA DV+RQN +G+WV  YD GLA+PF+  T E+A   EQ LWAAYDAI CP LLVRG  
Sbjct: 181 KLAADVMRQNAQGQWVFVYDPGLALPFRQATAESARQDEQRLWAAYDAITCPVLLVRGTD 240

Query: 241 SDLLLPEVAQEMTRRGPKAKLVELPDVGHAPTFMHAPQIEVARQFLLG 288
           SDLL PE A  M++RGPKAK+VEL  VGHAPTF+   QI +A+ F  G
Sbjct: 241 SDLLSPETALAMSQRGPKAKVVELAGVGHAPTFLSEAQIAIAKDFFPG 288


>gi|134095366|ref|YP_001100441.1| putative hydrolase protein
           [Herminiimonas arsenicoxydans]
          Length = 290

 Score = 72.8 bits (177), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 118/276 (42%), Gaps = 27/276 (9%)

Query: 10  QCISPAGLHTMAYKEWGDARNPNVLVCVHGVTRVSDDFDRMARELCDTYRVICPDVVGRG 69
           + IS  G+H    + WGD R P +L  +HG   VS  F  +   L   + VI PD  G G
Sbjct: 7   EFISLRGMHYH-IRHWGDQRAP-MLFMLHGWMDVSASFQFLVDALQRDWHVIAPDWRGFG 64

Query: 70  RSGRLANPQFYTVPQYVADMVTLLAR-ADAEIVDWFGTSMGGLIGMGLASLPGNPIRRLV 128
            S R A P  Y  P Y+AD+  +L   A  + V+  G S+G  +    A +  + I++LV
Sbjct: 65  LSARTAAP--YWFPDYLADLDAILRHYAPEQAVNLLGHSLGANVAGIYAGVRASRIKKLV 122

Query: 129 -LNDIGPSIN--GAALARIGEYIGQ---DVRFDTFEEAAQYIRTISASFGHHSDEEWHKL 182
            L   G S+     A  R   ++ Q     R  ++         +  +    SDE    L
Sbjct: 123 MLEGFGMSVTQPDEAPVRYASWLDQVQGTPRLHSYATVNGVAARLQKNNPRLSDERAAFL 182

Query: 183 AKDVLRQNEEGKWVRHYDLGLAVPF-KLTTPEAASAAEQMLWAAYDAIRCPTLLVRGAQS 241
           A     QNE G W    D+ LA P+ KL  P      E M  A + AI  PTL +  + S
Sbjct: 183 ASHWAAQNEGGSW----DI-LADPWHKLPNPNLYRVDEVM--ACWQAITAPTLWIEASDS 235

Query: 242 DLLL-----PEVAQEMTRRGP---KAKLVELPDVGH 269
           +LL           E+ RR      A ++ + D GH
Sbjct: 236 ELLRRMGSGESARAEIARRIAYLRNATILTVQDAGH 271


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.322    0.137    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 591,832
Number of extensions: 25213
Number of successful extensions: 79
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 80
Number of HSP's successfully gapped: 2
Length of query: 288
Length of database: 1,000,347
Length adjustment: 81
Effective length of query: 207
Effective length of database: 733,452
Effective search space: 151824564
Effective search space used: 151824564
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 128 (53.9 bits)