BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1808.p
         (342 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095248|ref|YP_001100323.1| beta N-acetyl-glucosaminidase [...   487   e-139

>gi|134095248|ref|YP_001100323.1| beta N-acetyl-glucosaminidase
           [Herminiimonas arsenicoxydans]
          Length = 357

 Score =  487 bits (1254), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 246/338 (72%), Positives = 271/338 (80%), Gaps = 3/338 (0%)

Query: 8   LGPVMLDVVGTHLDAADIARIQHPLTGGVILFARNYESRAQLVALTAAIRQARPGILIAV 67
            GPVMLDVVGT L A DI RIQHPLTGGVILFARNY++RAQL  LTAAI  AR GI+IAV
Sbjct: 17  FGPVMLDVVGTELSADDIRRIQHPLTGGVILFARNYKNRAQLTELTAAIHGARAGIVIAV 76

Query: 68  DHEGGRVQRFRSDGFTRLPAMGLLGQLWERDVLQATKLATATGFVLAAELRACGIDLSFT 127
           DHEGGRVQRF++DGFT LPAM  LG+LW++DVL ATK AT  G+VLAAELRACG+DLSFT
Sbjct: 77  DHEGGRVQRFKTDGFTHLPAMRKLGELWDKDVLAATKAATEVGYVLAAELRACGVDLSFT 136

Query: 128 PVLDLDYGVSTVIGDRAFHRDARVVTLLAKSLNHGLALAGMANCGKHFPGHGFVTADSHV 187
           PVLDLDYG S VIGDRAFHRDARVV+LLAKSLNHGL LAGM NCGKHFPGHGFV ADSH+
Sbjct: 137 PVLDLDYGASGVIGDRAFHRDARVVSLLAKSLNHGLMLAGMLNCGKHFPGHGFVKADSHL 196

Query: 188 AIPVDERALEAILGEDATPYDWLGMSLAAVMPAHVIYPKVDAQPAGFSKVWLSMLRERFG 247
            IPVDER L+ IL EDA PY +LG+SLA VMPAHVIYPKVD  PAGFS+ WL+MLR+ FG
Sbjct: 197 EIPVDERELKDILAEDAAPYKYLGLSLAGVMPAHVIYPKVDKHPAGFSRKWLTMLRKDFG 256

Query: 248 FQGVIFSDDLSMHGASVAGGPLQAAQAALDAGCDVALICNSTDKADAILAGLQGGTDAA- 306
           F G+IFSDDLSM GASVAG  +    AAL AGCD+ LICNS DKAD +LAGL+     A 
Sbjct: 257 FDGLIFSDDLSMEGASVAGNVVDGGHAALAAGCDMILICNSPDKADQLLAGLKIKDSKAM 316

Query: 307 --SAARRATLLPCGEALGWDALQADPRYLAARALVQSL 342
             SAAR A L P   AL W ALQ + RYLAA+    SL
Sbjct: 317 TQSAARIAALTPQAPALAWAALQQEVRYLAAKKTALSL 354


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.323    0.137    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 652,265
Number of extensions: 26363
Number of successful extensions: 62
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 61
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 1,000,347
Length adjustment: 82
Effective length of query: 260
Effective length of database: 730,157
Effective search space: 189840820
Effective search space used: 189840820
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 129 (54.3 bits)