BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1802.p
         (304 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095255|ref|YP_001100330.1| leader peptidase (signal peptid...   453   e-129

>gi|134095255|ref|YP_001100330.1| leader peptidase (signal peptidase
           I), serine protease [Herminiimonas arsenicoxydans]
          Length = 307

 Score =  453 bits (1166), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 216/308 (70%), Positives = 256/308 (83%), Gaps = 7/308 (2%)

Query: 1   MQALLGNFALILFVLMLVTGVIWFADTFFLSKQRRARADAALAEFDARVARDEAQGIKRD 60
           +Q LLGNF+LILFVL + TGV+W  D F+L+K+RRARADA LAEFDAR A+   +GIK D
Sbjct: 3   LQDLLGNFSLILFVLTMGTGVVWVLDVFYLAKKRRARADAVLAEFDARNAKLAGEGIKPD 62

Query: 61  GSVASSRADLQAHHLKQPAWIEYSGSFFPVIALVFCLRSFLYEPFKIPSSSMVPTLLVGD 120
            +    RA LQA  ++QP WIEYSGSFFPVIALVF LRSFLYEPFKIPS+SMVPTL VGD
Sbjct: 63  NN---GRAALQASLMRQPTWIEYSGSFFPVIALVFGLRSFLYEPFKIPSTSMVPTLQVGD 119

Query: 121 LILVNKFTYGIRLPIINKKIIEVGEPQRGDVMVFKFPKDPSVDYIKRVVGVPGDKIVYKN 180
           LILVNK+TYGIRLPIINKKIIEVG PQRGDVMVFK+P++ ++DYIKRVVGVPGD + Y+N
Sbjct: 120 LILVNKYTYGIRLPIINKKIIEVGHPQRGDVMVFKYPENMTLDYIKRVVGVPGDTVTYRN 179

Query: 181 KRLTINGEQISYKALPDYLDQENLTYYKQWQENLTGVEHKILTDERAPNFVPNPDAFPHH 240
           KRL +NG+Q+SYK LPDYLD+E L+Y K   ENL GV H+IL + RAP++V NP  FP+ 
Sbjct: 180 KRLIVNGKQVSYKPLPDYLDEETLSYSKLLTENLNGVAHQILNNPRAPSYVSNPHDFPNR 239

Query: 241 ELCTYNADGFACTVPPGEYFMMGDNRDNSLDSRYWGFVPDQNIVGKAFFVWMNL----GD 296
           +LCTY+A+GF C VP G+YFMMGDNRDNSLDSRYWGFVPD+NIVGKAFF+W+NL     +
Sbjct: 240 DLCTYDAEGFTCKVPAGQYFMMGDNRDNSLDSRYWGFVPDKNIVGKAFFIWLNLNSFPNN 299

Query: 297 ITRIGSFH 304
           + RIGSF 
Sbjct: 300 LGRIGSFQ 307


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.324    0.141    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 582,468
Number of extensions: 23360
Number of successful extensions: 40
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 39
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 1,000,347
Length adjustment: 81
Effective length of query: 223
Effective length of database: 733,452
Effective search space: 163559796
Effective search space used: 163559796
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 128 (53.9 bits)