BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1789.p
         (365 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095268|ref|YP_001100343.1| putative glycerol-3-phosphate a...   536   e-154

>gi|134095268|ref|YP_001100343.1| putative glycerol-3-phosphate
           acyltransferase PlsX [Herminiimonas arsenicoxydans]
          Length = 357

 Score =  536 bits (1382), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 264/341 (77%), Positives = 303/341 (88%)

Query: 1   MTIKISIDCMGGDHGPSVTLPAAASFLKRQPDAELILVGQEAVLQPLLKKYKLAGEPRVR 60
           MTIKISIDCMGGDHGP+VT+PAA SF++ +PDAELILVG    L   LKK+K    PR+ 
Sbjct: 1   MTIKISIDCMGGDHGPAVTIPAAISFVESEPDAELILVGLADQLWAELKKHKAGEHPRLS 60

Query: 61  IHHATEVVTMEDPVEVALRRKKDSSLRVAVTLVKDGQAHAAVSAGNTGALMAVSRYVLKT 120
           + +ATEVVTM+D +E ALRRKK+SS+RVA+ LVK GQA A VSAGNTGALMA+SRYVLKT
Sbjct: 61  VVNATEVVTMDDTLEAALRRKKNSSMRVAINLVKQGQADACVSAGNTGALMAISRYVLKT 120

Query: 121 LPGVDRPAICTILPNQKDGPTYMLDLGANVDCEPQHLHQFALMGSALVAVMEGKAKPTVG 180
           LPGVDRPAIC+ILPNQKDGPTYMLDLGANVDCEPQHLHQFALMGSALV+ MEGK +PTVG
Sbjct: 121 LPGVDRPAICSILPNQKDGPTYMLDLGANVDCEPQHLHQFALMGSALVSAMEGKPRPTVG 180

Query: 181 LLNVGEEDMKGNELVKATAGLLRAEHEKGILNFYGNVEGNDIFEGTTDLVVCDGFVGNVT 240
           LLNVGEED+KGN++VK TA LLRA+HE+G LNFYGNVEGNDIF+GTTD+VVCDGFVGNVT
Sbjct: 181 LLNVGEEDIKGNDIVKQTAVLLRADHERGTLNFYGNVEGNDIFKGTTDIVVCDGFVGNVT 240

Query: 241 LKASEGLGRFVKQVLTSEFKKGFINKLGALIAYGAIKALSRRLNPSRYNGASLLGLKGLV 300
           LKASEGLGRFVK VLT+EFK+  +  LGALIA  A+KA+S+RLNPSRYNG SLLGL+GLV
Sbjct: 241 LKASEGLGRFVKSVLTTEFKRNPLTMLGALIARSALKAISQRLNPSRYNGGSLLGLRGLV 300

Query: 301 FKSHGGADVYAFEWAIRRAYDAAKYDVLARIAASMAELMPQ 341
           FKSHGGAD Y ++WAI+RA+DAAKYDVLARI+  +A+LMPQ
Sbjct: 301 FKSHGGADAYGYQWAIKRAFDAAKYDVLARISTKIADLMPQ 341


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.318    0.135    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 675,902
Number of extensions: 27678
Number of successful extensions: 67
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 67
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 1,000,347
Length adjustment: 83
Effective length of query: 282
Effective length of database: 726,862
Effective search space: 204975084
Effective search space used: 204975084
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 129 (54.3 bits)