BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1756.p
         (254 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095272|ref|YP_001100347.1| hypothetical protein HEAR2082 [...   378   e-106
gi|134093463|ref|YP_001098538.1| putative uroporphyrin-III C/tet...    74   6e-15

>gi|134095272|ref|YP_001100347.1| hypothetical protein HEAR2082
           [Herminiimonas arsenicoxydans]
          Length = 250

 Score =  378 bits (971), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/254 (74%), Positives = 211/254 (83%), Gaps = 4/254 (1%)

Query: 1   MPGILYLVPNTLGSTELPTDTDAAHPLEAIIPRQVQAIAARLDYFVAENAKTTRAFLKLL 60
           MPGILYL+PNTLG TE+    DAA PL  IIP +VQAI A+LDYF+AENAKTTRAFLKL+
Sbjct: 1   MPGILYLIPNTLGQTEI----DAADPLAHIIPVEVQAITAKLDYFIAENAKTTRAFLKLI 56

Query: 61  GSNTPLTKPIQEIQISELNVNTPATALPALLAPLLAGRDGGLISEAGVPAVADPGANLVR 120
           G+   L KPIQEI I+ELNVNT    LPALL P+LAG+D GLISEAGVPAVADPGANLVR
Sbjct: 57  GTRNALIKPIQEICIAELNVNTDTKNLPALLEPILAGQDAGLISEAGVPAVADPGANLVR 116

Query: 121 LAHQHGIQVRPLVGPSSLLLAVMASGLNGQSFAFNGYLPTDAEARAKRIRQLEDRSRKEK 180
           LAH  GIQV+PLVGPSSLLLAVMASGL+GQ+FAFNGYLP DA  R KRI+QLE+RSR EK
Sbjct: 117 LAHAQGIQVKPLVGPSSLLLAVMASGLSGQNFAFNGYLPIDAVTRIKRIKQLEERSRAEK 176

Query: 181 QTQLLIETPYRNGAMLEALAQACQPGTLICVATDLSLPSESVRTQTAAQWKAALAAHKAP 240
           QTQ  IETPYRN  MLE LA  C   TLI VATDL+LPSE+++T+TAA+WKA  ++ K P
Sbjct: 177 QTQFFIETPYRNAGMLENLAAHCSGNTLISVATDLTLPSENIQTKTAAKWKAECSSGKMP 236

Query: 241 DFHKKPTVFLLLAE 254
           DFHKKPTVFLLLAE
Sbjct: 237 DFHKKPTVFLLLAE 250


>gi|134093463|ref|YP_001098538.1| putative uroporphyrin-III
           C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
           [Herminiimonas arsenicoxydans]
          Length = 298

 Score = 73.9 bits (180), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 86/165 (52%), Gaps = 8/165 (4%)

Query: 90  LLAPLLAGRDGGLISEAGVPAVADPGANLVRLAHQHGIQVRPLVGPSSLLLAVMASGLNG 149
           L++ L AG    L+S+AG PAV+DPGA +V      G++V PL GPS+ + A+ ASGL  
Sbjct: 82  LISRLQAGERIALVSDAGTPAVSDPGARIVDAVRNAGLRVVPLPGPSAAVAALSASGLLN 141

Query: 150 QSFAFNGYLPTDAEARAKRIRQLEDRSRKEKQTQLLIETPYRNGAMLEALAQACQPGTLI 209
             F F G+LP  A+ R   +  L+  +     T +  E P+R    + AL  A +P   I
Sbjct: 142 DQFYFVGFLPAKAKQRETFLFGLKSVA----ATMVFYEAPHRIHETVAALVAAFEPTRHI 197

Query: 210 CVATDLSLPSESVRTQTAAQWKAALAAHKAPDFHKKPTVFLLLAE 254
             A +L+   E +   T A+  A + A    D H++   F++L E
Sbjct: 198 VFARELTKLFEEIHRCTLAEASAWIEA----DVHRQKGEFVVLLE 238


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.317    0.132    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 411,519
Number of extensions: 14273
Number of successful extensions: 51
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 50
Number of HSP's successfully gapped: 2
Length of query: 254
Length of database: 1,000,347
Length adjustment: 80
Effective length of query: 174
Effective length of database: 736,747
Effective search space: 128193978
Effective search space used: 128193978
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 127 (53.5 bits)