BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1749.p
         (204 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094628|ref|YP_001099703.1| molybdopterin-guanine dinucleot...   201   2e-53

>gi|134094628|ref|YP_001099703.1| molybdopterin-guanine dinucleotide
           synthase [Herminiimonas arsenicoxydans]
          Length = 198

 Score =  201 bits (512), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 100/194 (51%), Positives = 124/194 (63%)

Query: 7   LTASHITGLVLAGGRGTRMGGVDKGLQLLHGKPLVQHVLERLAPQVGTLAINANRSQLQY 66
           +  S ITGL+LAGGRGTRMG VDKGLQL    P+  HVL RL+PQVG L INAN++   Y
Sbjct: 1   MDTSQITGLILAGGRGTRMGTVDKGLQLFRDAPMALHVLMRLSPQVGYLMINANQNIAPY 60

Query: 67  ARFGYPVWHDLQSDYPGPLAGLQCGLAHCTTPLLASAPCDSPLIPFDLVAHLAEAMAAAG 126
             FG PVW D    + GPLAGL  GL HC T  + S PCDSP +P +LVA LA  +    
Sbjct: 61  EGFGAPVWQDEFQGFAGPLAGLHTGLTHCETDYMVSVPCDSPFLPANLVARLAAGLEEKH 120

Query: 127 AEAAIAVTDDGQRRQRHPVCSLLRSATRSSLDAFLAAGERKMERWFATLACVEVEFPDAR 186
           A+ A+AVT +G+ RQ HPV  LL+++    L  +L  G RK ++W+A+L   EV F D  
Sbjct: 121 ADLAVAVTGEGETRQPHPVFCLLKTSLLPHLTLYLQEGGRKFDKWYASLEVAEVHFDDED 180

Query: 187 AFSNINTGPELQRL 200
           AF NINT  EL + 
Sbjct: 181 AFRNINTLDELHKF 194


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.320    0.135    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 385,224
Number of extensions: 14764
Number of successful extensions: 37
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 37
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 1,000,347
Length adjustment: 77
Effective length of query: 127
Effective length of database: 746,632
Effective search space: 94822264
Effective search space used: 94822264
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 126 (53.1 bits)