BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1745.p
         (832 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095282|ref|YP_001100357.1| hypothetical protein HEAR2093 [...  1093   0.0  

>gi|134095282|ref|YP_001100357.1| hypothetical protein HEAR2093
           [Herminiimonas arsenicoxydans]
          Length = 843

 Score = 1093 bits (2828), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 565/832 (67%), Positives = 669/832 (80%), Gaps = 1/832 (0%)

Query: 1   MFQQALRMTLRDWRTGELRFLLIALVVAVAALSSVGFFVDRMRAGMTRDAHQLLGADLLI 60
           MF Q+ RMT RDWR GELRFLL+AL+VAVAALSSVGFFVDRMR G+ RDAHQLLGAD++I
Sbjct: 11  MFVQSFRMTQRDWRAGELRFLLVALIVAVAALSSVGFFVDRMRTGLNRDAHQLLGADMVI 70

Query: 61  AADQPLPPTWLQQAAQAGLLQAQTQVFPSMAQAGEGDAARSVLASIKAVTAGYPLRGQLT 120
            AD+P+       A Q GL  A+T VFPSMA AGEG+   S LASIKAV+ GYPLRG++ 
Sbjct: 71  RADEPIAAALRNDAKQRGLELAETVVFPSMAIAGEGEQTVSRLASIKAVSNGYPLRGKVK 130

Query: 121 LRADDGRD-RPAQGIPQPGTVWVDPQILSQLDVKVGDTLKLGDLPVKIAALISVEPDRGS 179
           +      D      IP  GTVWVD  IL  L V VG  LKLGD    IA +++ EPDRG+
Sbjct: 131 VSEQPESDGVVTDSIPAAGTVWVDAAILDSLHVTVGSPLKLGDKVFTIAKVLTFEPDRGA 190

Query: 180 AFVNFAPRVMLGEADLAATHLVQVGSRVTYRLLIAGPAEAVQRYQQQIERQIEAEQLRGV 239
            F+NFAPRVML +ADLAAT+LVQ GSRV+YRLL+AG    V+ + Q+++  I+ + ++G+
Sbjct: 191 GFMNFAPRVMLSQADLAATNLVQNGSRVSYRLLLAGKPADVKAFDQKVQAAIDTQNIKGM 250

Query: 240 RLESLENGRPEMRATLDRAEQFLSLVGLLSAMLAALAVAMAARRFMLRHLDACAMLRCFG 299
           R ESLE+GRPEMRATL+RAEQFLSLVGLLSAMLAA+AVAMAARRFM+RH++ACAMLRC G
Sbjct: 251 RTESLESGRPEMRATLERAEQFLSLVGLLSAMLAAVAVAMAARRFMVRHVNACAMLRCLG 310

Query: 300 LTQAQVTVLYLTEFILIGTVASVIGMLLGFAAHFALLQWLGGFMPTALPPPGWAPALQGV 359
           +TQ QVT LYL EF+LIG V SVIG+L+GF+AHF L++WLG  +   LP   + PALQ +
Sbjct: 311 MTQNQVTALYLIEFLLIGVVGSVIGVLIGFSAHFVLIEWLGKLVTKELPAASFIPALQAL 370

Query: 360 ATGLLLLVGFALPPILQLRNVPHNRVIRRDQGAPQALTVASYLLGTLVFSGLLLWQAGDL 419
           ATGLLLL+GFA+PPILQLRNVPHNRVIRR+Q  PQ +TVA+Y+LG L F GLLLWQAG++
Sbjct: 371 ATGLLLLIGFAIPPILQLRNVPHNRVIRREQELPQPITVATYVLGLLTFIGLLLWQAGNV 430

Query: 420 KLGLLTIAGFLGGFGLFALLAWLCLRALRALRGLVDRQSWRFAIDGLQRRPAAAVMQVVA 479
           KLGLLT  GFLGG  +FAL++WL L++L++LRG +   SWRFA+  LQRRP A V+QVVA
Sbjct: 431 KLGLLTAVGFLGGLAVFALISWLALKSLQSLRGAIAHPSWRFAVTALQRRPGATVVQVVA 490

Query: 480 LGLGLMALLLLTVIRGDLVGAWRQATPADAPNRFIINIQPDQRQAVQQALRQGGVQDVAL 539
           L LGLMALLLLTVIRGDLV AWR ATP DAPNRF+INIQPDQ+   +  L Q  +    L
Sbjct: 491 LALGLMALLLLTVIRGDLVSAWRNATPPDAPNRFVINIQPDQKTQFEARLAQHKISGNDL 550

Query: 540 YPMIRGRLVQINGRAITAADYQEDRAKRLVDREFNLSTMPDIPPGNGIVAGRWYDDSKPE 599
           YPMIRGRL+ IN   IT   + EDRAKRLVDREFNLSTM DIP  N I AGRWYDDSKPE
Sbjct: 551 YPMIRGRLLAINDVPITGETFIEDRAKRLVDREFNLSTMRDIPEQNEITAGRWYDDSKPE 610

Query: 600 ASVERGLAQTLGIKLGDRLQFDIAGQLVEAPVTSLRKLEWGSLRVNFFVILNPTLMRDTP 659
           ASVE GLA+TL +KLGD L+F+IAG+ V+ PVTSLRKLEWGS+RVNFFVI+NP +M+D P
Sbjct: 611 ASVEEGLAKTLKLKLGDHLKFEIAGETVDVPVTSLRKLEWGSMRVNFFVIINPAVMKDMP 670

Query: 660 QSWITAVHLTPAQEALGNTLTRDFPNLTVVDIGSVLRQIQEVVGQVIAAVEFLFLFTLCS 719
           QSWITA HL  A     N LTRDFPNLTVVDIGSVL+QIQEVV QV++AVEFLFLFTL S
Sbjct: 671 QSWITAFHLPAADVKWENQLTRDFPNLTVVDIGSVLKQIQEVVDQVVSAVEFLFLFTLAS 730

Query: 720 GVLVLYAALAGSQDERVREAGLLRALGATRQELSSAQRIEVLLVGSLAGLLAASGAAAIG 779
           G+LVLYAAL GSQDER+REAGLLRALGATR++LS +Q IE LLVG LAG LAA+GA A+G
Sbjct: 731 GMLVLYAALVGSQDERMREAGLLRALGATRKQLSHSQWIEFLLVGGLAGFLAATGATAVG 790

Query: 780 WALAHYVFNFDWSFSPLVWVAGMGLGAACSALGGWAGLRHVLRRPPLQTLRE 831
           W+LAH+VF+F W FSP+VW+AG+G+G+AC+ +GGW GLRHVL +PPLQTLRE
Sbjct: 791 WSLAHFVFDFAWVFSPVVWLAGVGIGSACAFIGGWVGLRHVLNQPPLQTLRE 842


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.325    0.139    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 1,330,638
Number of extensions: 50134
Number of successful extensions: 222
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 220
Number of HSP's successfully gapped: 1
Length of query: 832
Length of database: 1,000,347
Length adjustment: 90
Effective length of query: 742
Effective length of database: 703,797
Effective search space: 522217374
Effective search space used: 522217374
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 133 (55.8 bits)