BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1737.p
         (326 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094513|ref|YP_001099588.1| acetyl-CoA carboxylase carboxyl...   617   e-178

>gi|134094513|ref|YP_001099588.1| acetyl-CoA carboxylase
           carboxyltransferase subunit alpha [Herminiimonas
           arsenicoxydans]
          Length = 324

 Score =  617 bits (1591), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 290/323 (89%), Positives = 314/323 (97%)

Query: 4   STTTFLGFEQAIAELDAKIEELRFVQDDSAVDISEEIERLVKKSQQLTKDIYAKLTPWQV 63
           S TTFLGFEQ IAELD+KIEELRFVQDDSAVDISEEI+RL KKSQQLTKDIYAKLTPWQV
Sbjct: 2   SKTTFLGFEQPIAELDSKIEELRFVQDDSAVDISEEIDRLSKKSQQLTKDIYAKLTPWQV 61

Query: 64  SQIARHPQRPYTMDYVREIFTDFHELHGDRTFADDQSIVGGLARFNGQACMVIGHQKGRD 123
           SQIARHPQRPYTMDYV EIFTDFHELHGDR++ADD SIVGGLARFNG  CMVIGHQKGRD
Sbjct: 62  SQIARHPQRPYTMDYVNEIFTDFHELHGDRSYADDLSIVGGLARFNGMPCMVIGHQKGRD 121

Query: 124 TKERAMRNFGMPKPEGYRKAMRLMKVAEKFGLPIFTFVDTPGAFPGIDAEERGQSEAIGH 183
           TKER++RNFGMPKPEGYRKAMRLMK+AEKF LP+FTFVDTPGAFPGIDAEERGQSEAIGH
Sbjct: 122 TKERSLRNFGMPKPEGYRKAMRLMKLAEKFNLPVFTFVDTPGAFPGIDAEERGQSEAIGH 181

Query: 184 NLYVMAELKVPLIATIIGEGGSGGALAIAVGDSVLMLQYATYSVISPEGCASILWKTADR 243
           NLYVMAELKVPLIATIIGEGGSGGALAIAVGD+VLMLQY+TYSVISPEGCASILWK+A+R
Sbjct: 182 NLYVMAELKVPLIATIIGEGGSGGALAIAVGDAVLMLQYSTYSVISPEGCASILWKSAER 241

Query: 244 AADAAEALGLTAHRLKAIGLIDKIVNEPLGGAHRDPKQMASLLKRALSDSLRQFQGMKTK 303
           A+DAAEALGLTAHRLKA+GLIDKI+NEPLGGAHRDPKQMA+L+KRAL+D++RQFQGMKTK
Sbjct: 242 ASDAAEALGLTAHRLKAMGLIDKIINEPLGGAHRDPKQMAALVKRALADTVRQFQGMKTK 301

Query: 304 DLLAARHEKLMAYGKFKELNSAE 326
           DLLAARHEKLM+YGKFKE+++ E
Sbjct: 302 DLLAARHEKLMSYGKFKEISTPE 324


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.319    0.135    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 583,653
Number of extensions: 23270
Number of successful extensions: 86
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 86
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 1,000,347
Length adjustment: 82
Effective length of query: 244
Effective length of database: 730,157
Effective search space: 178158308
Effective search space used: 178158308
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 129 (54.3 bits)