BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1714.p
         (222 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094229|ref|YP_001099304.1| putative carboxylesterase [Herm...   280   5e-77

>gi|134094229|ref|YP_001099304.1| putative carboxylesterase
           [Herminiimonas arsenicoxydans]
          Length = 220

 Score =  280 bits (715), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 129/218 (59%), Positives = 165/218 (75%)

Query: 5   LETIQIETAPNPGAAVIWLHGLGADGSDFVPIVRELDLSGCPPIRFIFPTAPTMPVTING 64
           L+T+++ T PNP  ++IW+HGLGADG+DFVPIV+ELDL+GCP IRF+FP AP + VTING
Sbjct: 3   LKTVELATTPNPTVSIIWMHGLGADGNDFVPIVKELDLTGCPGIRFVFPHAPMLEVTING 62

Query: 65  GYVMRAWYDIFAPDLVRREDEPGLRASQAAIEALIAQEKARGIPAERIVLAGFSQGCAMT 124
           G +M AWYDI A +  R +DE  +R SQ  I ALI +EK RGI A++I++AGFSQGCAMT
Sbjct: 63  GRMMPAWYDISATEFGRDDDEKSVRDSQVDINALIDREKERGIAADKILIAGFSQGCAMT 122

Query: 125 LQTGLRHPERLAGLMCLSGYLPLAATIEAERHGANHDTPIFMAHGTLDPVVVLERAVKSR 184
            QT LRHPE+L GL+CLSGYLPL  + EAER  AN  TPIF  HG  D V+ + RA ++ 
Sbjct: 123 FQTALRHPEKLGGLLCLSGYLPLEDSFEAERSAANQHTPIFYCHGRDDQVIPITRAQQTL 182

Query: 185 DLLTQLGHQVEWHDYPMQHSVCGEEVADIGAWLTKVLA 222
            LL + G++VEWH+Y M HSVC EE+ D+  +L +VLA
Sbjct: 183 ALLQKHGYEVEWHEYDMPHSVCMEEIIDLSNFLKRVLA 220


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.322    0.138    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 467,778
Number of extensions: 18989
Number of successful extensions: 58
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 58
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 1,000,347
Length adjustment: 78
Effective length of query: 144
Effective length of database: 743,337
Effective search space: 107040528
Effective search space used: 107040528
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 127 (53.5 bits)