BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1659.p
         (636 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094027|ref|YP_001099102.1| heat shock protein 90 [Herminii...  1120   0.0  

>gi|134094027|ref|YP_001099102.1| heat shock protein 90
           [Herminiimonas arsenicoxydans]
          Length = 642

 Score = 1120 bits (2896), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/633 (86%), Positives = 590/633 (93%)

Query: 4   EKQTMGFQAEVKQLLQLMIHSLYSNKEIFLRELVSNASDAADKLRFEAINNGSLFEDDPE 63
           EKQT+GFQAEVKQLLQLMIHSLYSNKEIFLREL+SNASDAADKLRFEAI+N +LFE+D E
Sbjct: 10  EKQTLGFQAEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFEAIDNSALFENDTE 69

Query: 64  LKIKISFDKAARTITISDNGIGMNRDEAISHLGTIAKSGTKEFFSRLSGDQQKDAALIGQ 123
           LKIK+SFDK  RTITISDNGIGM+R +A+ HLGTIAKSGTKEFFSRLSGDQQKDAALIGQ
Sbjct: 70  LKIKVSFDKEKRTITISDNGIGMSRHDAVEHLGTIAKSGTKEFFSRLSGDQQKDAALIGQ 129

Query: 124 FGVGFYSGFIIADRITVETRRAGTPASEGVRWESEGAGDFSIEQIDKPGRGTDIILHLRE 183
           FGVGFYSGFIIADRITVETRRAG  A+EGVRWESEGAGDF++E IDKP RGTDIILHLRE
Sbjct: 130 FGVGFYSGFIIADRITVETRRAGAAANEGVRWESEGAGDFTVEAIDKPTRGTDIILHLRE 189

Query: 184 GEDEFLSSWQLKSIIRKYSDHISLPILMNKEEWDEEKKETVQKDELETVNQASALWTRSK 243
           GEDEFLSSW+LKSIIRKYSDHISLPI+M KEEW+EEKKETV  DELETVNQASALW RSK
Sbjct: 190 GEDEFLSSWKLKSIIRKYSDHISLPIVMQKEEWNEEKKETVVTDELETVNQASALWARSK 249

Query: 244 SDITPEQYEEFYKHVSHDFGAPLAYTHNRVEGRSEYTQLLYIPARAPFDLWDRNKRGGIK 303
           +DITPEQY EFYKHVSHDFG PL YTHNRVEGRSEYTQLLYIP++APFDLWDRNKRGGIK
Sbjct: 250 NDITPEQYTEFYKHVSHDFGEPLTYTHNRVEGRSEYTQLLYIPSQAPFDLWDRNKRGGIK 309

Query: 304 LYVKRVFIMDDAEQLMPVYLRFVKGVIDSADLPLNVSREILQESRDVRAIRDGSAKRVLS 363
           LYVKRVFIMDDAEQLMPVYLRFVKGVIDSADLPLNVSREILQESRDV+ IR+GS KRVL 
Sbjct: 310 LYVKRVFIMDDAEQLMPVYLRFVKGVIDSADLPLNVSREILQESRDVKVIREGSTKRVLG 369

Query: 364 LLEELANSEEQAQKDKYTTFWTEFGQVLKEGIGEDAANKERIAKLLRFASTHNDSDVQNV 423
           +LEELAN++EQ +KDKYTTFW  FGQVLKEG+GEDA NKERIAKLLRFASTHNDSD Q V
Sbjct: 370 MLEELANADEQEKKDKYTTFWNAFGQVLKEGMGEDATNKERIAKLLRFASTHNDSDAQTV 429

Query: 424 ALADYVGRMKEGQDKIYYVTAETYQAAKNSPHLEIFRKKGVEVLLLTDRVDEWMLSFLTE 483
           + ADYV RMKEGQ KI+Y T E+Y AAKNSPHLEIFRKKG+EVLLLTDRVDEWMLSFL +
Sbjct: 430 SFADYVSRMKEGQTKIFYATGESYNAAKNSPHLEIFRKKGIEVLLLTDRVDEWMLSFLED 489

Query: 484 FEGKELASVAKGGLDLGKLENEAEKKQHEETQAEYKELVEKMKTALGDKAKEVRVTFRLT 543
           FEGKELASVAKG LDLG+LE+EAEKKQH+ET+ +YKELV KM+TAL DKAKEVRVTFRLT
Sbjct: 490 FEGKELASVAKGDLDLGQLEDEAEKKQHQETEDQYKELVGKMQTALADKAKEVRVTFRLT 549

Query: 544 DSPACLVADENELSGNLVRMLKAAGQAAPESKPTLEINPDHPLVQRLKYEEARFDDWSHI 603
           DSPACLVADENELSGNL+RMLKAAGQ AP++KP LEINPDHPLVQRLKYEEA+FDDWS+I
Sbjct: 550 DSPACLVADENELSGNLLRMLKAAGQNAPDAKPILEINPDHPLVQRLKYEEAKFDDWSNI 609

Query: 604 LYDQALLAEGGALADPASFVKRLNDMLLAMAAK 636
           L+DQALLAEGG L DPA FVKRLN+MLL +A+K
Sbjct: 610 LFDQALLAEGGNLNDPAGFVKRLNEMLLGLASK 642


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.315    0.132    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 1,152,722
Number of extensions: 47809
Number of successful extensions: 148
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 148
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1,000,347
Length adjustment: 88
Effective length of query: 548
Effective length of database: 710,387
Effective search space: 389292076
Effective search space used: 389292076
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 132 (55.5 bits)