BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1584.p
         (309 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095370|ref|YP_001100445.1| putative redox-regulated molecu...   458   e-130

>gi|134095370|ref|YP_001100445.1| putative redox-regulated molecular
           chaperone heat-shock-like protein [Herminiimonas
           arsenicoxydans]
          Length = 308

 Score =  458 bits (1178), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/313 (71%), Positives = 258/313 (82%), Gaps = 9/313 (2%)

Query: 1   MKDTLQKFLVDNAPVRGELVEISDTWRQVQARRDYPVAVRTLLGEMLAAAALLSANLKFN 60
           M DTL KF+ ++A VRGELV++SDTW+ V ARRDYP AV+T+LGEML+AAALLSANLKFN
Sbjct: 1   MTDTLHKFMFEDATVRGELVDVSDTWKHVLARRDYPAAVKTVLGEMLSAAALLSANLKFN 60

Query: 61  GMIVMQIHGDGPVKLLVVECDSELQLRATAKLADDAAIAEDATLTDLVNAAGHGRFVITL 120
           G I+MQI+GDGP++LLVVECDSEL LRATAKLADDA I++DATL+DLVN  G GRFVITL
Sbjct: 61  GAIIMQIYGDGPLRLLVVECDSELNLRATAKLADDAIISDDATLSDLVNVKGQGRFVITL 120

Query: 121 DPKDKLPGQQAYQGVVPLDGESVATVIENYMLRSEQLDTKLWLAADENVSRGLLLQKLPS 180
           DPKDKLPGQQAYQG+VPLDG+SVATVIENYMLRSEQLDT+LWLAAD+  +RGLLLQKLP 
Sbjct: 121 DPKDKLPGQQAYQGIVPLDGDSVATVIENYMLRSEQLDTRLWLAADDQAARGLLLQKLPH 180

Query: 181 IGGTAARTAQPEGE--LEAWNHMVMLGDTLKREELLCTDIATLMHRLFWEQTIRVFDPVH 238
            GG A     P GE  L  W+  VML  TL+++EL+ TD+ TLM RLFWE+TIRVF+P H
Sbjct: 181 EGGIA-----PTGENDLATWDRSVMLASTLRQDELVTTDVETLMRRLFWEETIRVFEPQH 235

Query: 239 PQFHCSCSREKVGNMLKMLGQEEVAEALSQMEKLAIDCDFCGQHYEFDAVDCAQLFV--A 296
           P F CSC+REKVGNMLKMLGQ EV  AL  + KLA+DCDFCGQHYEFD VDCA LF   A
Sbjct: 236 PHFLCSCTREKVGNMLKMLGQAEVDSALEDLGKLAVDCDFCGQHYEFDPVDCAHLFATEA 295

Query: 297 DVGSASEASGARH 309
            V +   AS A+H
Sbjct: 296 PVETLIAASPAKH 308


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.320    0.134    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 500,388
Number of extensions: 16732
Number of successful extensions: 48
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 47
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 1,000,347
Length adjustment: 81
Effective length of query: 228
Effective length of database: 733,452
Effective search space: 167227056
Effective search space used: 167227056
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 128 (53.9 bits)