BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1362.p (1078 letters) Database: BlastDatabases/690/690 3295 sequences; 1,000,347 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|134094275|ref|YP_001099350.1| multidrug ABC transporter membr... 809 0.0 gi|134095559|ref|YP_001100634.1| aminoglycoside/multidrug efflux... 373 e-104 gi|134095880|ref|YP_001100955.1| aminoglycoside/multidrug efflux... 358 e-100 gi|134094813|ref|YP_001099888.1| RND divalent metal cation efflu... 266 4e-72 gi|134093787|ref|YP_001098862.1| RND divalent metal cation efflu... 263 2e-71 >gi|134094275|ref|YP_001099350.1| multidrug ABC transporter membrane protein [Herminiimonas arsenicoxydans] Length = 1034 Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust. Identities = 469/1061 (44%), Positives = 677/1061 (63%), Gaps = 44/1061 (4%) Query: 1 MNISLPFIQRPIATTLLTIGIALAGIVAFRLLPVSPLPQVDYPTISISASMPGASPETMA 60 MNIS I+RP+ T LL+I + + G + LP++ LP D P I+++AS+PGASPE MA Sbjct: 1 MNISELCIRRPVMTVLLSIAVVVVGFFCYFKLPIAALPSYDTPVINVTASLPGASPEVMA 60 Query: 61 ATVATPLERAMGAIAGVTEMTSTSSQNSTRITLQFDLNRDIDGAARDVQAALNAARNLLP 120 ++VATPLE+ IAGV ++S+S+ +T I L+FD NRDID AA DVQAAL A+ LP Sbjct: 61 SSVATPLEKQFSTIAGVATISSSSTLGNTSIVLEFDQNRDIDAAAVDVQAALLRAQRSLP 120 Query: 121 TGMPSNPTYRKVNPADAPILILAMTSDTMTQGQMYDAADSIVAQKLSQVRGVGQVSVGGS 180 M P YRKVNPADA IL+LA+TS +++ ++ D A+++++ LS + GV QV V G Sbjct: 121 EEMNDLPAYRKVNPADAAILLLALTSPSLSLSELNDYAENLISPSLSTIDGVAQVQVYGQ 180 Query: 181 SQPAVRIELNPTALNKYGIGSADVRTAVAATNANRPKGLLEDADRNWQIYANDQAKTAAE 240 + AVRI++ P+ L + ++ ++ A NAN P G+L+ + + AN Q + A Sbjct: 181 RRYAVRIKVKPSELAARNMTLDEIAASIRAANANSPVGVLDGPRQTLTLQANRQLQNAEA 240 Query: 241 YAPLIVSYRNGTPVRVQDVAEVRDSVADVRNAGSANGKPSVLIIINRQPGANIIDTVDNV 300 + L++S G R++DVA V DSV ++ NGKPS+++ + RQP AN + VD V Sbjct: 241 FGNLVISSSKGQTTRLKDVATVEDSVESTKSGSWVNGKPSIVLAVQRQPNANTVAVVDAV 300 Query: 301 RELLPQLQASIPSAIDMKVVLDRTPTIRASLKETEFTLMLSVALVIMVVFLFLRNARATL 360 + LP Q+ +P++ID++V+ DR+ +IR ++ + + TL+L++ LV++V+FLFL+ AT Sbjct: 301 KHTLPLFQSQMPASIDLQVLNDRSVSIREAIHDVKLTLLLTILLVVLVIFLFLKRLTATA 360 Query: 361 IPAVAVPVSLIGTFGIMYLAGFSLDNLSLMALTIATGFVVDDAIVVLENISRHIEAGMKP 420 IP +++P+SLIG +MY GFSLDN+SL+ +TIA G VVDDAIV+LENI RHIE GM+P Sbjct: 361 IPVLSLPISLIGCCALMYWMGFSLDNVSLLGITIAVGLVVDDAIVMLENIVRHIEDGMEP 420 Query: 421 YQAALLGAREVGFTVLSMSISLIAVFIPILMMEGIVGRLFREFAITLSVAILVSLVVSLT 480 AAL G+REV FT++S+SISL+AVFIPI M G++G L EFA +S+A+LVS V+SLT Sbjct: 421 LAAALKGSREVSFTIISISISLVAVFIPIFFMPGVIGLLLHEFAAVVSLAVLVSAVMSLT 480 Query: 481 TTPMMCAQLLRHDPAADEARR-QRRHPWLQKIADQSAAIFADMLLAYERSLAWALRAAPL 539 PM+C++ L+H+ A E Q + WL + ++ +F +L +Y R+L W+L Sbjct: 481 LVPMLCSRFLKHEKAGHENDAVQPQENWLIRSFEK---VFNRLLASYTRALDWSLAHRTT 537 Query: 540 MMVILVATIALNVHLYKAIPKGFFPQQDTGRLVGGIRGDQAISFQAMRAKLNEFIDIVKA 599 M+V+ T L +L+ IPKGFFP +D G++ I G Q S+ M + I++ Sbjct: 538 MLVLAAGTFVLTAYLFITIPKGFFPTEDIGQISVTIEGPQDASYPTMVKLVTAVGTIIQN 597 Query: 600 DPAVSDVVAFTGGQRRNGGFMYVTLKPLSERKDSADKVVGRLRIKTAKVAGARVFLVPVQ 659 DP V T + N G M+V LKP + R + D V+ LR K V G V+L PVQ Sbjct: 598 DPNVETATMRT--RDSNVGNMFVGLKPRTAR-EPMDAVLRGLRAKVKAVPGVTVYLTPVQ 654 Query: 660 DIRIGARQSDSEYEYSLKSDDVGLLRIWEPKIRLALTNLKELEDVSSDQQDNGLQTTLTI 719 ++R+G R S S+++Y L+S L +W KI+ + DV+SD Q GLQ + I Sbjct: 655 NLRLGGRTSKSQFQYVLQSVRADELNVWAEKIQAEMRADGSFIDVTSDSQLKGLQAVVDI 714 Query: 720 DRETAMRAGVTPQLIDSTLSDLFGQRQISTIYSGMNQYHVVMEAAPKYWQSPEILRDTYV 779 +R+ A AGV I + L +G RQ+STIY+ N Y V IL+D V Sbjct: 715 NRDRANEAGVGIADIRTALYSAYGDRQVSTIYTSSNSYSV-------------ILQDESV 761 Query: 780 SLAGSSNLSPTTSSLSTPPALSASGQLNANTGLAQTLSTAPSKQVPLATFARFEPTTTSL 839 S+LS L + TG+ VPL + A + T + Sbjct: 762 GRQDESDLSKI--------------YLRSKTGVL----------VPLLSVATVKRTAGPI 797 Query: 840 AVNHDGQFVASTLSFNLAEGVSLSQATAAIDRAMAQLGVPTSVLGTFAGTANAFQSSTSS 899 +VNH GQ A T+SFNLA G+ L AT +D+ + +P+S++ +AG A FQSS +S Sbjct: 798 SVNHQGQLQAITISFNLAPGIPLGDATRKVDQIKDAISLPSSIVTNYAGDAAVFQSSQAS 857 Query: 900 QPILILTALLAVYIVLGILYESLIHPITIISTLPSAGVGALLALMLTGTDFSLIALIGVI 959 Q L++ AL+ +YI+LG+LYES IHP+TI++ LPSA VGALL L + G + ++IA+IG++ Sbjct: 858 QIALVVLALVVIYILLGVLYESYIHPVTILAGLPSAAVGALLTLRIFGFELTMIAMIGIL 917 Query: 960 LLIGIVKKNAIMMVDFAIDAERHRGLSPRDAIFEACKLRFRPIMMTTMAALLGAIPLAIG 1019 LLIG+VKKNAIMM+DFA+ A+R +GL+P +AI AC LRFRPIMMTT+AA +GA+P+A+G Sbjct: 918 LLIGLVKKNAIMMIDFALAAQREQGLTPLEAIRTACILRFRPIMMTTLAAAVGALPIALG 977 Query: 1020 HGDGAELRQPLGIAIVGGLVVSQLLTLYTTPVVYLYMERLS 1060 G GAELRQPLG+A+VGGL+VSQ++TL TPV+YL+++R S Sbjct: 978 LGAGAELRQPLGLAVVGGLMVSQVITLLITPVIYLFLDRFS 1018 >gi|134095559|ref|YP_001100634.1| aminoglycoside/multidrug efflux pump [Herminiimonas arsenicoxydans] Length = 1053 Score = 373 bits (957), Expect = e-104, Method: Compositional matrix adjust. Identities = 309/1079 (28%), Positives = 530/1079 (49%), Gaps = 80/1079 (7%) Query: 7 FIQRPIATTLLTIGIALAGIVAFRLLPVSPLPQVDYPTISISASMPGASPETMAATVATP 66 FI RPI +L+I I LAG +A LP+S P + PT+SI A+ PGAS + + +V Sbjct: 5 FIDRPIFAWVLSIIIMLAGGLAIFTLPISQYPTIAPPTVSIQATYPGASAKVVENSVTQI 64 Query: 67 LERAMGAIAGVTEMTSTSS-QNSTRITLQFDLNRDIDGAARDVQAALNAARNLLPTGMPS 125 +E+ M + G+ M++TSS S ++TL FD D D A VQ L A LLP + Sbjct: 65 IEQNMKGLDGLIYMSATSSATGSAQLTLTFDNKTDPDIAQVQVQNKLQLASPLLPQEVQR 124 Query: 126 NPTYRKVNPADAPILILAMTSD--TMTQGQMYDAADSIVAQKLSQVRGVGQVSVGGSSQP 183 A + ++ S+ +M + + D + + LS+V GVG + V GS + Sbjct: 125 QGVVVS-KAASGFLQVVGFVSEDGSMDKDDISDYVAANLVDPLSRVPGVGNIQVFGS-KY 182 Query: 184 AVRIELNPTALNKYGIGSADVRTAVAATNANRPKGLLEDA------DRNWQIYANDQAKT 237 ++RI L+P L+ Y + + D+ + A NA G L A N I A D+ +T Sbjct: 183 SMRIWLDPNKLDTYKLATTDIIATIRAQNAQVAVGQLGGAPSAPGQQLNATISAQDRLQT 242 Query: 238 AAEYAPLIV-SYRNGTPVRVQDVAEVRDSVADVRNAGSANGKPSVLIIINRQPGANIIDT 296 ++ +++ S +G+ +++ D+A V + NGKP+ ++I+ GAN +DT Sbjct: 243 PEQFRAIVIRSNPDGSTLKLGDIARVELGAENYETISRYNGKPATGVLISLSTGANALDT 302 Query: 297 VDNVRELLPQLQASIPSAIDMKVVLDRTPTIRASLKETEFTLMLSVALVIMVVFLFLRNA 356 ++ L +L+ P+ + V D TP I S+K TL+ ++ALV +V++LF++N Sbjct: 303 AVGIKNKLEELKPYFPAGLTAVVPFDTTPFISVSIKGVVVTLLEAIALVFLVMYLFMQNI 362 Query: 357 RATLIPAVAVPVSLIGTFGIMYLAGFSLDNLSLMALTIATGFVVDDAIVVLENISRHI-E 415 RATLIP +AVPV L+GTFGI+ GFS++ L++ A+ +A G +VDDAIVV+EN+ R + E Sbjct: 363 RATLIPTIAVPVVLLGTFGILAALGFSINMLTMFAMVLAIGLLVDDAIVVVENVERIMTE 422 Query: 416 AGMKPYQAALLGAREVGFTVLSMSISLIAVFIPILMMEGIVGRLFREFAITLSVAILVSL 475 G+ P +A ++ ++ +++ L AVF+P+ + G G ++R+F T+ A+ +S+ Sbjct: 423 EGLSPLEATRKSMDQITGALVGIALVLSAVFVPMAFLGGSTGIIYRQFTATIVSAMALSV 482 Query: 476 VVSLTTTPMMCAQLLRHDPAADEARRQRRHPWLQKIADQSAAIFADMLLAYERSLAWALR 535 +V++ TP +CA +L+ + + W + D+S+ + Y+ + L Sbjct: 483 LVAVVLTPALCATMLKPVKKGEHGKTTGFFAWFNRNFDRSS-------VKYQSGVRGILG 535 Query: 536 AAPLMMVILVATIALNVHLYKAIPKGFFPQQDTGRLVGGIR----GDQAISFQAMRAKLN 591 M I +A I + V L+ +P F P +D G L I+ Q + +A++ + Sbjct: 536 RGKRFMAIFLALIVVMVLLFVRLPSSFLPNEDQGILFSLIQTPVGATQERTLEAIKKVEH 595 Query: 592 EFI-DIVKADPAVSDVVAFT-GGQRRNGGFMYVTLKPLSER---KDSADKVVGRLRIKTA 646 F+ D A ++ V F+ G +N G ++ LK SER + D V GR + Sbjct: 596 HFLTDEKDAVESIFTVQGFSFAGTGQNNGMAFIKLKDWSERTSAESQIDAVAGRAMGAFS 655 Query: 647 KVAG-ARVFLVPVQDIRIGARQSDSEYEYSLKSD-DVGLLRIWEPKIRL--ALTNLKELE 702 ++ P +G + + + + LK + ++G + + + +L A K L Sbjct: 656 QIKDAFAFAFAPPAIPELG---TAAGFSFFLKDNANLGHDALVQARNQLLGAAAQSKLLA 712 Query: 703 DVSSDQQDNGLQTTLTIDRETAMRAGVTPQLIDSTLSDLFGQRQISTIYSGMNQYHVVME 762 V + Q++ Q + ID + A G++ I+STLS +G + I V M+ Sbjct: 713 KVRPNGQEDSPQFRIDIDTQKASAQGLSIADINSTLSTAWGGQYIDDFIDRGRVKRVYMQ 772 Query: 763 AAPKYWQSPEILRDTYVSLAGSSNLSPTTSSLSTPPALSASGQLNANTGLAQTLSTAPSK 822 A + PE + V + GQ+ Sbjct: 773 ADAPFRMVPEDFKLWSVR--------------------NNQGQM---------------- 796 Query: 823 QVPLATF--ARFEPTTTSLAVNHDGQFVASTLSFNLAEGVSLSQATAAIDRAMAQLGVPT 880 VP + F AR+E + L ++G A + A G+S + I+R QL P Sbjct: 797 -VPFSAFASARWEYGSPRLE-RYNG-VSAMEIQGEAAPGISSGASMDEIERLAGQL--PA 851 Query: 881 SVLGTFAGTANAFQSSTSSQPILILTALLAVYIVLGILYESLIHPITIISTLPSAGVGAL 940 + + + + S +L +LL V++ L LYES P ++ P +GA+ Sbjct: 852 GFGIEWTALSYQERQAGSQTTLLYTLSLLIVFLCLAALYESWTIPTAVLLVAPLGILGAV 911 Query: 941 LALMLTGTDFSLIALIGVILLIGIVKKNAIMMVDFAIDAERHRGLSPRDAIFEACKLRFR 1000 LA L G + + + ++ +G+ KNAI++V+FA A G+ DA +A ++R R Sbjct: 912 LANTLAGMERDVYFQVAMLTTVGLTSKNAILIVEFA-KANLESGMELIDATLQAVRVRLR 970 Query: 1001 PIMMTTMAALLGAIPLAIGHGDGAELRQPLGIAIVGGLVVSQLLTLYTTPVVYLYMERL 1059 PI+MT++A LG +PLA+ G G+ ++ +G +VGG++V LL ++ P+ ++ +ERL Sbjct: 971 PIIMTSLAFGLGVLPLALASGAGSGAQRAIGTGVVGGMIVGTLLGIFFIPLFFVLVERL 1029 >gi|134095880|ref|YP_001100955.1| aminoglycoside/multidrug efflux pump [Herminiimonas arsenicoxydans] Length = 1049 Score = 358 bits (919), Expect = e-100, Method: Compositional matrix adjust. Identities = 293/1064 (27%), Positives = 515/1064 (48%), Gaps = 83/1064 (7%) Query: 7 FIQRPIATTLLTIGIALAGIVAFRLLPVSPLPQVDYPTISISASMPGASPETMAATVATP 66 FI RP+ +L I I LAG +A LPVS P + PTI I+A+ PGA+ +T+ +V + Sbjct: 5 FIDRPVFAWVLAIFIMLAGALAITSLPVSQYPNIAPPTIVITATYPGATAQTLDDSVTSL 64 Query: 67 LERAMGAIAGVTEMTSTSSQNS-TRITLQFDLNRDIDGAARDVQAALNAARNLLPTGMPS 125 +E+ M G+ + S S N +IT+ F + D AA DV L LP + Sbjct: 65 IEQEMNGADGLQYVESQSQANGQVQITVTFSPETNPDLAAVDVSNRLKRVEARLPAAV-- 122 Query: 126 NPTYRKVNPADAPILILAMTSDTMTQGQM-----YDAADSIVAQKLSQVRGVGQVSVGGS 180 T + V A A L + T G++ D V ++ +V GVGQ + G+ Sbjct: 123 --TQQGVQVAKARSNFLMFIGLSSTDGRLDPVALGDYLSRNVLNEVKRVPGVGQAQLFGT 180 Query: 181 SQPAVRIELNPTALNKYGIGSADVRTAVAATNANRPKGLLED--ADRNWQIYA----NDQ 234 + A+RI ++P L + A+V A+ NA G+L D + + QI A N Q Sbjct: 181 ER-AMRIWIDPNKLVGLNLTPAEVTAAINTQNALVAGGILGDLPSPSSQQISATVVVNGQ 239 Query: 235 AKTAAEYAPLIV-SYRNGTPVRVQDVAEVRDSVADVRNAGSANGKPSVLIIINRQPGANI 293 + E+ +I+ + ++G+ VR++DVA + + +G +G P+ I + P AN Sbjct: 240 LSSPEEFGKIILRANKDGSSVRLRDVARIEVGGQSYQTSGRLDGNPTSFIGVQLSPTANA 299 Query: 294 IDTVDNVRELLPQLQASIPSAIDMKVVLDRTPTIRASLKETEFTLMLSVALVIMVVFLFL 353 + T V + + L P+ + V D + ++ S++E TL+ ++ LV +V++LFL Sbjct: 300 LGTATAVHKKMEDLARYFPAGVKYTVPYDTSKFVKISIEEVVKTLIEAIILVFLVMYLFL 359 Query: 354 RNARATLIPAVAVPVSLIGTFGIMYLAGFSLDNLSLMALTIATGFVVDDAIVVLENISRH 413 +N R TLIP + VPV+L+GTF + + GFS++ L++ + +A G +VDDAIVV+EN+ R Sbjct: 360 QNIRYTLIPTIVVPVALLGTFATLLVFGFSINVLTMFGMVLAIGILVDDAIVVVENVERI 419 Query: 414 I-EAGMKPYQAALLGAREVGFTVLSMSISLIAVFIPILMMEGIVGRLFREFAITLSVAIL 472 + E G+ P A ++ ++ +++ LIAVF+P+ G VG ++R+F++++ +++ Sbjct: 420 MSEEGLSPRDATRKAMGQITGAIIGITLVLIAVFLPMAFFGGAVGAIYRQFSLSMVASMV 479 Query: 473 VSLVVSLTTTPMMCAQLLRHDPAADEARRQRRHPWLQKIADQSAAIFADMLLAYERSLAW 532 S +++ T TP +CA +L+ + W + IF L+Y+ + Sbjct: 480 FSALMAFTLTPALCATILKPVEKGHHHEKGGFFGWFNR-------IFHKTSLSYQGFIGK 532 Query: 533 ALRAAPLMMVILVATIALNVHLYKAIPKGFFPQQDTGRLVGGIRGDQAISFQAMRAKLNE 592 L M++ +A LY +P F P +D G ++ ++ S L + Sbjct: 533 MLTKTTRYMIVYGLIVACVGLLYARLPASFLPSEDQGYIITNVQLPAGASSGRTLEVLKQ 592 Query: 593 FIDIVKADPAVSDVVAFTG----GQRRNGGFMYVTLKPLSER--KDSADKVVGRLRIKTA 646 + PAV V++ +G G +N G ++ S+R +D+AD + GR + Sbjct: 593 IEEYYLKQPAVEHVISISGFSFSGNGQNAGLVFTPFIDWSKRGKEDTADAIAGRAFGAFS 652 Query: 647 KVAGARVFLVPVQDIRIGARQSDSEYEYSLKSDDVGLLRIWEPKIRLALTNL----KELE 702 ++ A VF P+ I + + + + L+ D GL R L + K L Sbjct: 653 QIKDAIVF--PLNPPPIRELGNATGFTFRLQ-DRGGLGHDALVAARNQLLGMAGQSKILA 709 Query: 703 DVSSDQQDNGLQTTLTIDRETAMRAGVTPQLIDSTLSDLFGQRQISTIYSGMNQYHVVME 762 V + ++ Q L IDR+ A GV I+S LS G ++ + Q V+++ Sbjct: 710 GVRPEGLEDAPQLQLDIDRDKANALGVPFASINSVLSTSLGSSYVNDFPNQGRQQRVIVQ 769 Query: 763 A-APKYWQSPEILRDTYVSLAGSSNLSPTTSSLSTPPALSASGQLNANTGLAQTLSTAPS 821 A AP+ Q+ ++ + S G+ Sbjct: 770 ADAPRRLQADDLTKLYARSTTGA------------------------------------- 792 Query: 822 KQVPLATFARFEPTTTSLAVNHDGQFVASTLSFNLAEGVSLSQATAAIDRAMAQLGVPTS 881 VP ++F + T + + + A +S + G S A ++ + +L P Sbjct: 793 -MVPFSSFITSKWITGPVQLIRYNGYPAMKISGGVKPGFSTGDAMKEMEALVQKL--PAG 849 Query: 882 VLGTFAGTANAFQSSTSSQPILILTALLAVYIVLGILYESLIHPITIISTLPSAGVGALL 941 + + G + Q+S + P L +L+AV++VL LYES P++++ +P +GALL Sbjct: 850 IGYEWTGQSLEEQTSGNQAPALYALSLIAVFLVLAALYESTSIPLSVMLVVPLGILGALL 909 Query: 942 ALMLTGTDFSLIALIGVILLIGIVKKNAIMMVDFAIDAE-RHRGLSPRDAIFEACKLRFR 1000 + L G + +G+I ++G+ KNAI++++FA D + + +GL +A EA LRFR Sbjct: 910 GVTLRGMPNDVYFKVGMIAVVGLSAKNAILIIEFAKDLQAQGKGLI--EATLEAVHLRFR 967 Query: 1001 PIMMTTMAALLGAIPLAIGHGDGAELRQPLGIAIVGGLVVSQLL 1044 PI+MT++A +LG +PL I G G+ ++ +G ++GG++ + +L Sbjct: 968 PIIMTSLAFILGVLPLVIASGAGSASQRAIGTGVMGGMITATVL 1011 >gi|134094813|ref|YP_001099888.1| RND divalent metal cation efflux transporter [Herminiimonas arsenicoxydans] Length = 1064 Score = 266 bits (680), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 271/1062 (25%), Positives = 467/1062 (43%), Gaps = 98/1062 (9%) Query: 16 LLTIGIALAGIVAFRLLPVSPLPQVDYPTISISASMPGASPETMAATVATPLERAMGAIA 75 L+TIGIA GI ++ LP+ +P + + I++S PG SP + P+E M + Sbjct: 18 LMTIGIAALGIYNYQKLPIDAVPDITNVQVQINSSAPGYSPLEAEQRITFPIETVMAGLP 77 Query: 76 GVTEMTSTSSQNSTRITLQFDLNRDIDGAARDVQAALNAARNLLPTGMPSNPTYRKVNPA 135 + + S S +++T+ F DI A + V + AR LP G+ NP ++ Sbjct: 78 FLEQTRSISRYGLSQVTVIFKEGTDIYFARQMVNERIQEAREKLPPGV--NPGMGPISTG 135 Query: 136 DAPILILAMTSDT---------MTQGQMYDAADSIVAQKLSQVRGVGQVSVGGSSQPAVR 186 I + + S T + + D I+ +L V GV +++ G + + Sbjct: 136 LGEIYMWTVESKPGALKPDGKPYTPTDLREIQDWIIKPQLRNVPGVTEINTIGGNAKEFQ 195 Query: 187 IELNPTALNKYGIGSADVRTAVAATNANRPKGLLEDADRNWQIYANDQAKTAAEYAPLIV 246 + P L +G+ D+ +A+ N N G +E + I A Q + +++ Sbjct: 196 VAPFPDKLIAHGLSLGDLVSALERNNNNVGAGYIEKRGEQYLIRAPGQVADLNDIGNIVI 255 Query: 247 SYRNGTPVRVQDVAEVRDSVADVRNAGSANGKPSVLIIINRQPGANIIDTVDNVRELLPQ 306 S R G P+R++DVA+V A + NGK VL + G N V + + + Sbjct: 256 STRQGVPLRIRDVADVVIGKELRTGAATENGKEVVLGTVFMLIGENSRSVAAAVDKKMKE 315 Query: 307 LQASIPSAIDMKVVLDRTPTIRASLKETEFTLMLSVALVIMVVFLFLRNARATLIPAVAV 366 + S+P I V DRT + ++ + LM LVI ++FLFL N RA +I A+ + Sbjct: 316 INRSLPKGIVADTVYDRTVLVDKAISTVKKNLMEGALLVIAILFLFLGNIRAAIITAMVI 375 Query: 367 PVSLIGTFGIMYLAGFSLDNLSLMALTIATGFVVDDAIVVLENISRHI-----EAGM--- 418 P++++ TF M S + +SL AL G ++D A+V++EN R + AG Sbjct: 376 PLAMLFTFTGMVGNKVSANLMSLGALDF--GIIIDGAVVIVENCIRRLSHAQAHAGRALT 433 Query: 419 --KPYQAALLGAREVGFTVLSMSISLIAVFIPILMMEGIVGRLFREFAITLSVAILVSLV 476 + + ++E ++ + ++ V++PI + G+ G++F A T+ +A++ +++ Sbjct: 434 RNERFHEVFAASKEARRPLIFGQLIIMVVYLPIFALSGVEGKMFHPMAFTVVIALVGAMI 493 Query: 477 VSLTTTPMMCAQLLRHDPAADEARRQRRHPWLQKIADQSAAIFADMLLAYERSLAWALRA 536 +SLT P A LL D ++ + R W ++ YE L W + + Sbjct: 494 LSLTFIPAAVA-LLIGDKVSE--KENRLMVWSKR--------------RYEPILDWVMLS 536 Query: 537 APLMMVILVATIALNVHLYKAIPKGFFPQQDTGRL------VGGIRGDQAISFQAMRAKL 590 PL++ ++ I L+ L + F P + G + + G QAI Q Sbjct: 537 KPLVLTMVAVVIVLSGLLMTRMGSEFIPSLNEGDIALHAMRIPGTSLTQAIEMQ------ 590 Query: 591 NEFIDIVKADPAVSDVVAFTGGQR-------RNGGFMYVTLKPLSER---KDSADKVVGR 640 E +K P VS V G N +V LKP SE K S ++V Sbjct: 591 KELERNIKLFPEVSRVFGKLGTAEIATDPMPPNVADTFVILKPQSEWPEPKRSKAELVTA 650 Query: 641 LRIKTAKVAGARV-FLVPVQDIRIGARQSDSEYEYSLK--SDDVGLLRIWEPKIRLALTN 697 ++ +KV G F P+Q +R S + ++K DD+ + +I L+ Sbjct: 651 MQEAVSKVPGNNYEFTQPIQ-MRFNELISGVRSDVAVKVFGDDMDAMNATAEQISGVLSG 709 Query: 698 LKELEDVSSDQQDNGLQTTLTIDRETAMRAGVTPQLIDSTLSDLFGQRQISTIYSGMNQY 757 + DV +Q T+ IDRE R GV + LS G R+ ++ G ++ Sbjct: 710 ISGAADVKVEQTTGLPMLTVKIDREKVARLGVNVGDVQEALSIAVGGREAGMLFEGDKRF 769 Query: 758 HVVMEAAPKYWQSPEILRDTYVSLAGSSNLSPTTSSLSTPPALSASGQLNANTGLAQTLS 817 +++ + PE +R+ ++ PT T S QL G T + Sbjct: 770 DILV-------RLPESVRNDIETIKKIPIRLPTLDG--TQSGTSGYTQL----GDVATFT 816 Query: 818 TAPS-KQVPLATFARFEPTTTSLAVNHDGQFVASTLSFNLAEGVSLSQATAAIDRAMAQL 876 AP Q+ R T+++ G FV T A + + + Sbjct: 817 LAPGPNQISRENGKRLVIVTSNVRGRDIGSFV-----------------TEAQQKVQSIV 859 Query: 877 GVPTSVLGTFAGTANAFQSSTSSQPILILTALLAVYIVLGILYESLIHPITIISTLPSAG 936 VPT ++ GT QS+T I++ ALL V+++L ++ ++ + + + +P A Sbjct: 860 KVPTGYWISWGGTFEQLQSATDRLKIVVPLALLLVFLLLFAMFGNVKDGLLVFTGVPFAL 919 Query: 937 VGALLALMLTGTDFSLIALIGVILLIGIVKKNAIMMVDFAIDAERHRGLSPRDAIFEACK 996 G + AL L S+ A +G I L G+ N ++M+ F I + R G + +AI E Sbjct: 920 TGGIAALWLRDIPLSISAGVGFIALSGVAVLNGLVMISF-IRSLREEGRTLDEAIHEGAL 978 Query: 997 LRFRPIMMTTMAALLGAIPLAIGHGDGAELRQPLGIAIVGGL 1038 R RP++MT + A LG +P+A+ G GAE+++PL ++GG+ Sbjct: 979 TRLRPVLMTALVASLGFVPMALAMGTGAEVQRPLATVVIGGI 1020 >gi|134093787|ref|YP_001098862.1| RND divalent metal cation efflux transporter [Herminiimonas arsenicoxydans] Length = 1063 Score = 263 bits (673), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 269/1063 (25%), Positives = 468/1063 (44%), Gaps = 100/1063 (9%) Query: 16 LLTIGIALAGIVAFRLLPVSPLPQVDYPTISISASMPGASPETMAATVATPLERAMGAIA 75 L+TIG+A GI ++ LP+ +P + + I++S PG SP + P+E M + Sbjct: 18 LMTIGMAALGIYNYQKLPIDAVPDITNVQVQINSSAPGYSPLEAEQRITFPVETVMAGLP 77 Query: 76 GVTEMTSTSSQNSTRITLQFDLNRDIDGAARDVQAALNAARNLLPTGMPSNPTYRKVNPA 135 + + S S +++T+ F DI A + V + A+ LP G+ +P+ ++ Sbjct: 78 FLEQTRSISRYGLSQVTVIFKEGTDIYFARQMVNERIQEAKEKLPPGV--SPSMGPISTG 135 Query: 136 DAPILILAMTSDT---------MTQGQMYDAADSIVAQKLSQVRGVGQVSVGGSSQPAVR 186 I + + + T T + + D I+ +L V GV +++ G + + Sbjct: 136 LGEIYMWTVEAKTGALKPDGTPYTPTDLREIQDWIIKPQLRNVPGVTEINTIGGNAKEFQ 195 Query: 187 IELNPTALNKYGIGSADVRTAVAATNANRPKGLLEDADRNWQIYANDQAKTAAEYAPLIV 246 + P L +G+ D+ A+ N N G +E + I A Q + +++ Sbjct: 196 VAPYPDKLIAHGLSLGDLVAALERNNNNVGAGYIEKRGEQYLIRAPGQVTDITDIGNIVI 255 Query: 247 SYRNGTPVRVQDVAEVRDSVADVRNAGSANGKPSVLIIINRQPGANIIDTVDNVRELLPQ 306 S R G P+R++DVA+V A + NGK VL + G N V + + + Sbjct: 256 STRQGVPLRIRDVADVVIGNELRTGAATENGKEVVLGTVFMLIGENSRSVAAAVDKKMKE 315 Query: 307 LQASIPSAIDMKVVLDRTPTIRASLKETEFTLMLSVALVIMVVFLFLRNARATLIPAVAV 366 + ++P I V DRT + ++ + LM LVI V+FLFL N RA +I A+ + Sbjct: 316 INLTLPKGIVADTVYDRTVLVDKAISTVKKNLMEGALLVIAVLFLFLGNIRAAIITAMVI 375 Query: 367 PVSLIGTFGIMYLAGFSLDNLSLMALTIATGFVVDDAIVVLENISRHIE-----AG---- 417 P++++ TF M S + +SL AL G ++D A+V++EN R + AG Sbjct: 376 PLAMLFTFTGMVGNKVSANLMSLGALDF--GIIIDGAVVIVENCIRRLSHAQALAGRALT 433 Query: 418 -MKPYQAALLGAREVGFTVLSMSISLIAVFIPILMMEGIVGRLFREFAITLSVAILVSLV 476 + + ++E ++ + ++ V++PI + G+ G++F A T+ +A++ +++ Sbjct: 434 RTERFHEVFAASKEARRPLIFGQLIIMVVYLPIFALSGVEGKMFHPMAFTVVIALVGAMI 493 Query: 477 VSLTTTPMMCAQLLRHDPAADEARRQRRHPWLQKIADQSAAIFADMLLAYERSLAWALRA 536 +SLT P A LL D ++ + R W ++ YE L W + + Sbjct: 494 LSLTFIPAAVA-LLIGDKVSE--KENRLMVWSKR--------------RYEPILDWVMLS 536 Query: 537 APLMMVILVATIALNVHLYKAIPKGFFPQQDTGRL------VGGIRGDQAISFQAMRAKL 590 PL++ I+ I L+ L + F P + G + + G QAI Q Sbjct: 537 KPLVLTIVGVVIVLSGLLMTRMGSEFIPSLNEGDIALHAMRIPGTSLTQAIEMQ------ 590 Query: 591 NEFIDIVKADPAVSDVVAFTGGQR-------RNGGFMYVTLKPLSER---KDSADKVVGR 640 E +K P VS V A G N +V LKP SE K S D++V Sbjct: 591 KELERNIKDFPEVSRVFAKLGTAEIATDPMPPNVADTFVILKPQSEWPEPKRSKDELVIA 650 Query: 641 LRIKTAKVAGARV-FLVPVQDIRIGARQSDSEYEYSLK--SDDVGLLRIWEPKIRLALTN 697 ++ +KV G F P+Q +R S + ++K DD+ + + +I L++ Sbjct: 651 MQEAVSKVPGNNYEFTQPIQ-MRFNELISGVRSDVAVKVFGDDMDAMNVTADQISDVLSS 709 Query: 698 LKELEDVSSDQQDNGLQTTLTIDRETAMRAGVTPQLIDSTLSDLFGQRQISTIYSGMNQY 757 + DV +Q T+ IDRE R GV + LS G R+ ++ G ++ Sbjct: 710 VPGAADVKVEQTTGLPMLTVKIDREKVARLGVNVGDVQEALSIAVGGREAGMLFEGDKRF 769 Query: 758 HVVMEAAPKYWQSPEILRDTYVSLAGSSNLSPTTSSLSTPPALSASGQLN-ANTGLAQTL 816 +++ + P+ +R+ S+ P + +G L G T Sbjct: 770 DILV-------RLPDSVRNDIESIKKIPIRLPVLEG-------TQAGTLGYTQLGDVATF 815 Query: 817 STAPS-KQVPLATFARFEPTTTSLAVNHDGQFVASTLSFNLAEGVSLSQATAAIDRAMAQ 875 + AP Q+ R T ++ G FV A R Sbjct: 816 TLAPGPNQISRENGKRLVIVTANVRGRDIGSFV-----------------NEAQQRVQGI 858 Query: 876 LGVPTSVLGTFAGTANAFQSSTSSQPILILTALLAVYIVLGILYESLIHPITIISTLPSA 935 + VPT T+ GT QS+T I++ +LL V+++L ++ ++ + + + +P A Sbjct: 859 VKVPTGYWITWGGTFEQLQSATDRLKIVVPLSLLLVFLLLFAMFGNVKDGLLVFTGVPFA 918 Query: 936 GVGALLALMLTGTDFSLIALIGVILLIGIVKKNAIMMVDFAIDAERHRGLSPRDAIFEAC 995 G + AL L S+ A +G I L G+ N ++M+ F I + R G S +AI E Sbjct: 919 LTGGIAALWLRDIPLSISAGVGFIALSGVAVLNGLVMISF-IRSLREEGRSLDEAIHEGA 977 Query: 996 KLRFRPIMMTTMAALLGAIPLAIGHGDGAELRQPLGIAIVGGL 1038 R RP++MT + A LG +P+A+ G GAE+++PL ++GG+ Sbjct: 978 LTRLRPVLMTALVASLGFVPMALAMGTGAEVQRPLATVVIGGI 1020 Database: BlastDatabases/690/690 Posted date: Apr 9, 2011 4:48 AM Number of letters in database: 1,000,347 Number of sequences in database: 3295 Lambda K H 0.320 0.133 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3295 Number of Hits to DB: 1,755,236 Number of extensions: 67814 Number of successful extensions: 364 Number of sequences better than 1.0e-08: 10 Number of HSP's gapped: 310 Number of HSP's successfully gapped: 20 Length of query: 1078 Length of database: 1,000,347 Length adjustment: 92 Effective length of query: 986 Effective length of database: 697,207 Effective search space: 687446102 Effective search space used: 687446102 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 134 (56.2 bits)