BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1320.p (965 letters) Database: BlastDatabases/690/690 3295 sequences; 1,000,347 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|134096579|ref|YP_001101654.1| NAD dependent formate dehydroge... 1654 0.0 gi|134093636|ref|YP_001098711.1| NAD dependent formate dehydroge... 598 e-172 gi|134093705|ref|YP_001098780.1| putative periplasmic assimilato... 312 6e-86 gi|134095025|ref|YP_001100100.1| NADH dehydrogenase I subunit G ... 214 1e-56 gi|134094636|ref|YP_001099711.1| formate dehydrogenase subunit a... 200 3e-52 >gi|134096579|ref|YP_001101654.1| NAD dependent formate dehydrogenase subunit alpha fdsA [Herminiimonas arsenicoxydans] Length = 956 Score = 1654 bits (4283), Expect = 0.0, Method: Compositional matrix adjust. Identities = 771/956 (80%), Positives = 854/956 (89%), Gaps = 6/956 (0%) Query: 1 MNQLNETDYGTPARASEQMVTLEIDGVQVTVPAGTSVMRASVEAGINVPKLCATDSLEPF 60 MN LN DYGTP SE MVTLEIDGV++TVP GTSVMRA+ E GINVPKLCATDSLE F Sbjct: 1 MNVLNSIDYGTPKSTSENMVTLEIDGVEITVPQGTSVMRAAAEVGINVPKLCATDSLEAF 60 Query: 61 GSCRLCLVEIEKDGRRMKGYPASCTTPCEPGMKVQTQTPKLAEIRRGVMELYISDHPLDC 120 GSCRLCLVEIE GRR GYPASCTTP E GMK++TQTPKLA+IRRGVMELYISDHPLDC Sbjct: 61 GSCRLCLVEIE--GRR--GYPASCTTPAEAGMKIKTQTPKLADIRRGVMELYISDHPLDC 116 Query: 121 LTCPTNGNCELQDMAGVVGLREVRYGYEGENHTKMKKDESNPYFTYDPSKCIVCNRCVRA 180 LTCPTNGNCELQDMAGVVGLR+VRYGY+GENH K++KDESNPYFTYD SKCIVCNRCVRA Sbjct: 117 LTCPTNGNCELQDMAGVVGLRDVRYGYDGENHLKLEKDESNPYFTYDASKCIVCNRCVRA 176 Query: 181 CEETQGTFALTINGRGFESRVSAGQMDTFMESECVSCGACVEACPTATLTEKTVIMLGQA 240 CEETQGTFALTI+GRGF SRV+A Q ++F+ESECVSCGACV+ACPTATLTEKTVIM+GQ Sbjct: 177 CEETQGTFALTIDGRGFASRVAASQNESFIESECVSCGACVDACPTATLTEKTVIMMGQG 236 Query: 241 EHSKVTTCAYCGVGCSFKAEMKGNEVVRMVPYKDGKANQGHSCVKGRFAWGYATHKDRIL 300 EHSK+TTCAYCGVGCSFKAEMKGNEVVRMVP DGKANQGH+CVKGRFAWGYATHKDR+L Sbjct: 237 EHSKITTCAYCGVGCSFKAEMKGNEVVRMVPNPDGKANQGHACVKGRFAWGYATHKDRML 296 Query: 301 NPMIRKSINDPWREVSWEEALSYAASEFRRIQAKHGKDSIGGITSSRCTNEETYLVQKLV 360 PMIR I+DPWREVSWEEA++Y ASEF+RIQAK+GKDSIGG+ SSRCTNEE YLVQKLV Sbjct: 297 KPMIRSKISDPWREVSWEEAINYTASEFKRIQAKYGKDSIGGLVSSRCTNEEGYLVQKLV 356 Query: 361 RAAFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQTFESVMHSDVILIMGANPASGHPVF 420 RAAFGNNNVDTCARVCHSPTGYGLK TLGESAGTQTFESVM SDVI+++GANP + HPVF Sbjct: 357 RAAFGNNNVDTCARVCHSPTGYGLKVTLGESAGTQTFESVMKSDVIVVIGANPVNAHPVF 416 Query: 421 ASQIKRRVRQGAKLIVIDPRTTEMVKSPHIQADYHLKLRPGTNTAIITALAHVILSEGLQ 480 ASQ+KRR+RQGAKLIV+DPRTTEMVKSPH+QADYHLKL PGTN AI+ ALA+VILSE L Sbjct: 417 ASQMKRRIRQGAKLIVVDPRTTEMVKSPHVQADYHLKLMPGTNVAIVNALAYVILSEKLH 476 Query: 481 DEAYIQERCDLQSYQDWKAFVLRADNSPEAMAAITGVPAETIRGAARLYATGGNAAIYYG 540 +I ERC+ S+++W+ F+L+ +NSPEA+ I+GVPAE IR AAR+YA N +IYYG Sbjct: 477 KPEFIAERCEADSFKEWEHFILQEENSPEAVEKISGVPAEDIRAAARMYANAKNGSIYYG 536 Query: 541 LGVTEHAQGSTTVMGIANLAMCTGNVGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRH 600 LGVTEHAQGSTTV+GIANLAM TGNVGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRH Sbjct: 537 LGVTEHAQGSTTVIGIANLAMATGNVGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRH 596 Query: 601 ISDATVRGQFEQAWGVTLNPEPGLRIPNMFDAALDGSFKGLYCEGEDIVQSDPNTQHVAA 660 +SD+T R +FE AW L+PEPGLRIPNMFDAA+DG+F GLYC+GEDIVQSDP+TQHV A Sbjct: 597 VSDSTTRAEFEAAWNCVLDPEPGLRIPNMFDAAMDGTFMGLYCQGEDIVQSDPDTQHVTA 656 Query: 661 ALQAMECIVVQDLFLNETAKYAHVFLPGSSFLEKDGTFTNAERRISRVRKVMPAKAGKSD 720 AL AMECIVVQD+FLNETAKYAHVFLPGSSFLEKDGTFTNAERRISRVRKVMP KAGK D Sbjct: 657 ALSAMECIVVQDIFLNETAKYAHVFLPGSSFLEKDGTFTNAERRISRVRKVMPPKAGKGD 716 Query: 721 WEVTVALAEALGYPMPYNHPSDIMDEIAALTPSFHGVSYDKLEKL-GSIQWPCNEAAPEG 779 WEVT L+ ALGYPM Y HP +IMDEIA+LTP+F GVS+ ++++L GSIQWPCN+AAPEG Sbjct: 717 WEVTCMLSNALGYPMSYKHPREIMDEIASLTPTFTGVSFKRIDELGGSIQWPCNDAAPEG 776 Query: 780 TPIMHVGSFIRGKGKFINTQYFATDEKVTQRYPLILTTGRILSQYNVGAQTRRTENSQWH 839 TP MH+G F+RGKGKFI+T+YF EKVT+++PLILTTGRILSQYNVGAQTRRT N+ WH Sbjct: 777 TPTMHIGEFVRGKGKFIDTKYFGAGEKVTRKFPLILTTGRILSQYNVGAQTRRTHNNMWH 836 Query: 840 SEDRLEIHPHDAEDRGIREGDWVGVESRAGQTVLRATVTENVQPGVVYTTFHFPESGANV 899 SEDRLEIHP DA DRGI+ DWVG+ESRAGQTVLRA +TENVQPGVVYTTFHFPESGANV Sbjct: 837 SEDRLEIHPQDALDRGIKHNDWVGIESRAGQTVLRAEITENVQPGVVYTTFHFPESGANV 896 Query: 900 ITTDNSDWATNCPEYKVTAVQVMPVTQPSEWQQHYERFNREQLELLKGDKQGDKQI 955 ITT +SDWATNCPEYKVTAVQVMPVTQPSEWQ Y RFN EQ E DK K++ Sbjct: 897 ITTSSSDWATNCPEYKVTAVQVMPVTQPSEWQSTYNRFNTEQ-ESFASDKLIPKEV 951 >gi|134093636|ref|YP_001098711.1| NAD dependent formate dehydrogenase subunit alpha Fdh1A [Herminiimonas arsenicoxydans] Length = 946 Score = 598 bits (1542), Expect = e-172, Method: Compositional matrix adjust. Identities = 335/923 (36%), Positives = 511/923 (55%), Gaps = 42/923 (4%) Query: 20 VTLEIDGVQVTVPAGTSVMRASVEAGINVPKLCATDSLEPFGSCRLCLVEIEKDGRRMKG 79 VT E++G +VT A +++ + GI +P LC + ++ G+CR C+VEI +G R+ Sbjct: 17 VTFELNGREVTGRATDTILTVAKREGIEIPHLCFKEGMDTAGNCRACVVEI--NGERVLA 74 Query: 80 YPASCTTPCEPGMKVQTQTPKLAEIRRGVMELYISDHPLDCLTCPTNGNCELQDMAGVVG 139 P+ C P GMKV T++ + + ++ V+EL SD P T T N E+ + A + Sbjct: 75 -PSCCRNPTN-GMKVNTESERAVKSQKLVLELLQSDMPE---TDYTRHN-EVDEWAAKME 128 Query: 140 LREVRYGYEGENHTKMKKDESNPYFTYDPSKCIVCNRCVRACEETQGTFALTINGRGFES 199 + + R+ E ++ D S+P T + CI C RCVRAC + Q + + RG + Sbjct: 129 VGKPRF----EARARVAPDFSHPAMTVNLDACIQCTRCVRACRDEQENDVIGLAFRGDHA 184 Query: 200 RVSAGQMDTFMESECVSCGACVEACPTATLTEKTVIMLGQAEHSKVTTCAYCGVGCSFKA 259 ++ D S CV+CG CV+ACPT L + + + + C YCGVGC Sbjct: 185 KIVFDMDDPMGASTCVACGECVQACPTGALMPARDVGMNVPDKQVDSVCPYCGVGCQLTY 244 Query: 260 EMKGNEVVRMVPYKDGKANQGHSCVKGRFAWGYATHKDRILNPMIRKS--------INDP 311 +K N+++ V +DG AN+ CVKGR+ + YA H R+ P+IR++ + DP Sbjct: 245 NIKDNKIL-YVEGRDGPANRERLCVKGRYGFDYANHPHRLTKPLIRRADAPKRGDFVMDP 303 Query: 312 ------WREVSWEEALSYAASEFRRIQAKHGKDSIGGITSSRCTNEETYLVQKLVRAAFG 365 +RE +WEEAL A F +I+ HGK S+ G S++ +NEE YL QKLVR FG Sbjct: 304 DRVMEVFREATWEEALEVAGGNFAKIRDTHGKKSLAGFGSAKGSNEEAYLFQKLVRTGFG 363 Query: 366 NNNVDTCARVCHSPTGYGLKQTLGESAGTQTFESVMHSDVILIMGANPASGHPVFASQIK 425 +NNVD C R+CH+ + L + +G A + V ++V++I+GANP HPV A+ IK Sbjct: 364 SNNVDHCTRLCHASSVVALLEGIGSGAVSNPVMDVTKAEVVIIIGANPTVNHPVAATWIK 423 Query: 426 RRVRQGAKLIVIDPRTTEMVKSPHIQADYHLKLRPGTNTAIITALAHVILSEGLQDEAYI 485 V G KLIV DPR T+M + H ++ + T+ A++ A+ +VI++EGL D+ +I Sbjct: 424 NAVSNGTKLIVCDPRRTDMARIAH----RFMQFKADTDVAMLNAMMNVIVTEGLVDKEFI 479 Query: 486 QERCDLQSYQDWKAFVLRADNSPEAMAAITGVPAETIRGAARLYATGGNAAIYYGLGVTE 545 + R Y++ + V +PE MA I G+ AET+R ARLYAT + I +G+GV++ Sbjct: 480 ESRT--IGYEELRKNV--EGYTPELMAPICGIDAETLRYVARLYATSKASMILWGMGVSQ 535 Query: 546 HAQGSTTVMGIANLAMCTGNVGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHISDAT 605 H G+ + L++ TG +GR G G++PLRGQNNVQG+ D G P P Y+ +SD Sbjct: 536 HIHGTDNARCLIALSLMTGQIGRPGTGLHPLRGQNNVQGASDAGLIPMVYPDYQSVSDPK 595 Query: 606 VRGQFEQAWGVT---LNPEPGLRIPNMFDAALDGSFKGLYCEGEDIVQSDPNTQHVAAAL 662 +R F +AW ++ L+PEPGL + + A DG +GLY +GE+ SDP+ H AL Sbjct: 596 IRANFAKAWNMSVDLLDPEPGLTVVEIMHAITDGKIRGLYVQGENPAMSDPDANHAREAL 655 Query: 663 QAMECIVVQDLFLNETAKYAHVFLPGSSFLEKDGTFTNAERRISRVRKVM-PAKAGKSDW 721 A++ +VVQD+FL ETA A V LP S+F EK GTFTN +R + R+ + P K D Sbjct: 656 AALDHLVVQDIFLTETAYLADVILPASAFPEKTGTFTNTDRTVQMGRQALNPPGEAKQDL 715 Query: 722 EVTVALAEALGYPMPYNHPSDIMDEIAALTPSFHGVSYDKLEKLGSIQWPCNEAAPEGTP 781 + +A LG Y H S++ DE+ PS G+++++LE+ S+ +PC + G P Sbjct: 716 WIIQQMANRLGCNWNYKHVSEVFDEMRHTMPSIAGITWERLEREDSVTYPCEKEGDPGEP 775 Query: 782 IMHVGSFIR--GKGKFINTQYFATDEKVTQRYPLILTTGRILSQYNVGAQTRRTENSQWH 839 ++ V SF R G+ +F+ E+ YP++L TGR L ++ G+ TRR Sbjct: 776 VVFVDSFPRESGRARFVPADIIPAAERPDTEYPMVLITGRQLEHWHTGSMTRRATVLDSI 835 Query: 840 SEDRLE-IHPHDAEDRGIREGDWVGVESRAGQTVLRATVTENVQPGVVYTTFHFPESGAN 898 D + IHP D + G + GD + +ESR G+ L A ++ G V+ F + E+ N Sbjct: 836 EPDPIALIHPLDLANMGGKPGDIITLESRRGEVSLYARADDSSPRGAVFVPFCYYEAAIN 895 Query: 899 VITTDNSDWATNCPEYKVTAVQV 921 +T D PE+K A+++ Sbjct: 896 RLTNAALDPFGKIPEFKYCAIRI 918 >gi|134093705|ref|YP_001098780.1| putative periplasmic assimilatory nitrate reductase, large subunit [Herminiimonas arsenicoxydans] Length = 944 Score = 312 bits (799), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 218/719 (30%), Positives = 339/719 (47%), Gaps = 47/719 (6%) Query: 247 TCAYCGVGCSFKAEMKGNEVVRMVPYKDGKANQGHSCVKGR----FAWGYATHKDRILNP 302 TC YCGVGC + G +V+ + D AN G C KG A + R L P Sbjct: 32 TCCYCGVGCGVLIQSDGEKVIAVRGDPDHPANFGRLCTKGSTLHLMARPALQQQSRALYP 91 Query: 303 MIRKSINDPWREVSWEEALSYAASEFRRIQAKHGKDSIGGITSSRCTNEETYLVQKLVRA 362 +R + +D SW + + ++F G DS+G S + E+ Y+ KL + Sbjct: 92 EMRLARSDERERTSWATTMDFIVNKFAATIRDQGPDSVGFYLSGQLLTEDYYVFNKLAKG 151 Query: 363 AFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQTFESVMHSDVILIMGANPASGHPVFAS 422 G NNVDT +R+C S G KQTLG A +E + ++VI I+G+N A HP+ Sbjct: 152 LIGTNNVDTNSRLCMSSAVAGYKQTLGADAPPPCYEDIDQAEVIFIVGSNTAYAHPILYR 211 Query: 423 QIK--RRVRQGAKLIVIDPRTTEMVKSPHIQADYHLKLRPGTNTAIITALAHVILSEGLQ 480 +I+ R+ K+IV DPR T+ + +AD L + PGT+ A+ + H+ L E L Sbjct: 212 RIEDARKANPQLKIIVADPRRTDTAR----EADLFLPILPGTDVALFNGMLHICLWEDLV 267 Query: 481 DEAYIQERCDLQSYQDWKAFVLRADNSPEAMAAITGVPAETIRGAARLYATGGNAAIYYG 540 D YI + + + K V + +P+ +A I G+ E + AAR++ Y Sbjct: 268 DLDYIAAHT--EDFAELKQTV--REYTPKFVADICGIKEEDLMQAARMFGKSTATLSMYC 323 Query: 541 LGVTEHAQGSTTVMGIANLAMCTGNVGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRH 600 G+ + + G+ + NL + T +G+ G G L GQ N G ++G L +R Sbjct: 324 QGLNQSSSGTAKNAALINLHLATHQIGKPGAGPFSLTGQPNAMGGREVGGLATMLSAHRD 383 Query: 601 ISDATVRGQFEQAWGVTLNPE-PGLRIPNMFDAALDGSFKGLYCEGEDIVQSDPNTQHVA 659 +++ R + + WGV P PG MF+A G K ++ + QS P + Sbjct: 384 LANPQHRAEIAKLWGVADVPATPGKSAVEMFEAVRTGEIKIIWIVCTNPAQSMPEQAMIR 443 Query: 660 AALQAMECIVVQDLF-LNETAKYAHVFLPGSSFLEKDGTFTNAERRISRVRKVMPAKAGK 718 AL+ E ++VQ+ + + YA V LP S++ EK+GT TN+ERRI+R + V+P K G+ Sbjct: 444 EALRNAELVIVQEAYKTTASCDYADVLLPASTWSEKEGTVTNSERRITRFKSVLP-KLGE 502 Query: 719 S--DWEVTVALAE----ALGYP---MPYNHPSDIMDEIAALTP----SFHGVSYDKLEKL 765 S DWE+ V A ALG P+ +I +E T G+S+ LE+ Sbjct: 503 SRHDWEIAVDFARRLEGALGKQSSIFPFESTEEIWNEHRESTRGRDLDITGLSFKLLEEQ 562 Query: 766 GSIQWPCNEAAPEGTPIMH---VGSFIRGKGKFINTQYFATDEKVTQRYPLILTTGRILS 822 G QWP E A G ++ + + G+ KF+NT Y E V RYP LTTGR+ Sbjct: 563 GPQQWPFPEGATTGRKRLYEDGIFPTLSGRAKFVNTVYQPVAEPVDARYPFHLTTGRLRD 622 Query: 823 QYNVGAQTRRTENSQWH-SEDRLEIHPHDAEDRGIREGDWVGVESRAGQTVLRATVTENV 881 Q++ ++T H SE + + D E R + GD V V S+ G + + +++ Sbjct: 623 QWHGMSRTGTVAQLFSHASEPSVVLSKIDMERRLLNVGDLVHVTSKRGSQIFPVALGDDM 682 Query: 882 QPGVVYTTFHFPES-------------GANVITTDNSDWATNCPEYKVTAVQVMPVTQP 927 + G + H+ E G N +T+ D ++ PE K AV+++ P Sbjct: 683 RAGQAFIGMHWGEEYVSGRGRDEGGTYGVNALTSPAFDPSSRQPELKHAAVKILKAEFP 741 >gi|134095025|ref|YP_001100100.1| NADH dehydrogenase I subunit G [Herminiimonas arsenicoxydans] Length = 777 Score = 214 bits (546), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 140/440 (31%), Positives = 227/440 (51%), Gaps = 27/440 (6%) Query: 19 MVTLEIDGVQVTVPAGTSVMRASVEAGINVPKLCATDSLEPFGSCRLCLVEIEKDGRRMK 78 MV +EIDG +V V AG+ VM A+ + G +P C L +CR+CLVE+EK + + Sbjct: 3 MVEIEIDGKKVEVEAGSMVMDAANKIGTYIPHFCYHKKLSIAANCRMCLVEVEKAPKPL- 61 Query: 79 GYPASCTTPCEPGMKVQTQTPKLAEIRRGVMELYISDHPLDCLTCPTNGNCELQDMAGVV 138 PA C TP PGM V++ + K + ++GVME + +HPLDC C G C+LQD+A V Sbjct: 62 --PA-CATPVTPGMIVRSHSEKAVQAQKGVMEFLLINHPLDCPICDQGGECQLQDLA--V 116 Query: 139 GLREVRYGYEGENHTKMKKDESNPYFTYDPSKCIVCNRCVRACEETQGTFALTINGRGFE 198 G E Y E + KD + S+CI C RCVR +E G + GRG Sbjct: 117 GYGESTSRYAEEKRVVVPKDVGPLISMQEMSRCIHCTRCVRFGQEVAGVMEFGMLGRGEH 176 Query: 199 SRVSAGQMDTFMESECVSCGACVEACPTATLTEKTVIMLGQA-EHSKVTTCA-YCGVGCS 256 + +++ T ++SE G ++ CP LT K + E S+ + + + G+G + Sbjct: 177 AEITSFVGKT-VDSEL--SGNMIDLCPVGALTSKPFRYSARTWELSRRKSVSPHDGLGAN 233 Query: 257 FKAEMKGNEVVRMVPYKDGKANQGHSCVKGRFAWGYATHKDRILNPMIRKSINDPWREVS 316 ++K +V+R++P ++ N+ K RF++ ++R+ +PMI++ + W+E Sbjct: 234 LVVQVKAGKVMRVLPLENDDVNECWISDKDRFSYEGLNSEERLTSPMIKQ--DGKWQETD 291 Query: 317 WEEALSYAASEFRRIQAKHGKDSIGGITSSRCTNEETYLVQKLVRAAFGNNNVDTCARVC 376 W+ AL Y A R I+ +HG ++I + + T EE L+ KLVR G+NNVD R Sbjct: 292 WQTALEYVAHGLRNIKHEHGAEAIAALATPDSTLEELSLLGKLVR-GMGSNNVDFRLRQA 350 Query: 377 HSPTGYGLKQTLGESAGTQTFESVMHSDVILIMGANPASGHPVFASQIKRRVRQGAKLIV 436 + + LG S F + + VI G+ HP+ A+++++ V+QGA + + Sbjct: 351 DALPDASITPWLGMS--INEFAGLKRAFVI---GSFLRKDHPLLAARLRQAVKQGANVSI 405 Query: 437 ID--------PRTTEMVKSP 448 + P +M+K+P Sbjct: 406 LHATDDDLLMPVANKMIKAP 425 >gi|134094636|ref|YP_001099711.1| formate dehydrogenase subunit alpha FdnG (partial match) [Herminiimonas arsenicoxydans] Length = 988 Score = 200 bits (509), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 148/529 (27%), Positives = 244/529 (46%), Gaps = 56/529 (10%) Query: 244 KVTTCAYCGVGCSFKAEMKGNEVVRMVPYKDGKANQGHSCVKGRFAWGYATHKDRILNPM 303 K T C +C VGC+ A ++ VR P D N G C KG + + R+ PM Sbjct: 78 KRTVCTHCSVGCASDAIVENGVWVRQEPVFDSPINLGAHCAKGASLREHGHGEYRLKYPM 137 Query: 304 IRKSINDPWREVSWEEALSYAASEFRRIQAKHGKDSIGGITSSRCTNEETYLVQKLVRAA 363 K +N ++ +SW++A++ ++ I+ G DS+ + SS+ NE+ L++K V + Sbjct: 138 --KLVNGKYQRISWDQAMNEITAKMLDIKKASGPDSVFFVGSSKHNNEQAALLRKFV-SF 194 Query: 364 FGNNNVDTCARVCHSPTGYGLKQTLGESAGTQTFESVMHSDVILIMGANPASGHPVFASQ 423 FG NN D AR+CHS T G+ T G A T ++ + +S L +G+N A HPV Sbjct: 195 FGTNNTDHQARICHSTTVAGVANTWGYGAMTNSYNDMQNSKAALYIGSNAAEAHPVSMLH 254 Query: 424 IKRRVRQGAKLIVIDPRTTEMVKSPHIQADYHLKLRPGTNTAIITALAHVILSEGLQDEA 483 + G K+IV+DPR T +AD ++++R GT+ + L + I G +D+ Sbjct: 255 MLHAKENGTKMIVVDPRFTRTAA----KADQYVRIRSGTDIPFLYGLLYHIFKNGWEDKK 310 Query: 484 YIQERCDLQSYQDWKAFVLRADNSPEAMAAITGVPAETIRGAARLYATGGNAAIYYGLGV 543 YI +R + + KA V+ +PE + GV + AA A + + + +G Sbjct: 311 YINDR--VYGMEKVKAEVMTW--TPEKVEEACGVTEAEMYRAAETMAKNRPSTLVWCMGQ 366 Query: 544 TEHAQGSTTVMGIANLAMCTGNVGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHISD 603 T+H+ G+ V + + GN+G G G N RG +NVQG+ D+G P LPGY ++ Sbjct: 367 TQHSIGNAMVRASCIVQLALGNIGVSGGGANIFRGHDNVQGATDVGPNPDSLPGYYGLAT 426 Query: 604 ATVRGQFEQAWGV------------TLNPEPGLRIPNMFDAAL--------DGSFKGLYC 643 + + + WGV + + G + DA L D + KG+ Sbjct: 427 GSWK-HWCAVWGVDYEWVKKQYVSQAMMEKSGTTVSRWVDAVLEKSENIDQDNTVKGVLF 485 Query: 644 EGEDIVQSDPNTQ----HVAAALQAMECIVVQDLFLNETAKYAHV--------------F 685 G PN+Q + A ++ +VV D + + TA A + Sbjct: 486 WGH-----APNSQTRGLDMKKAFDKLDLLVVIDPYPSATAAMAAMKVDGQELNPNRAVYL 540 Query: 686 LPGSSFLEKDGTFTNAERRISRVRKVM-PAKAGKSDWEVTVALAEALGY 733 LP ++ E G+ T + R + KV+ P ++D + +A+ LG+ Sbjct: 541 LPAATQFETSGSVTASNRSLQWREKVIEPLFESRTDHMIMYQMAQKLGF 589 Database: BlastDatabases/690/690 Posted date: Apr 9, 2011 4:48 AM Number of letters in database: 1,000,347 Number of sequences in database: 3295 Lambda K H 0.317 0.132 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3295 Number of Hits to DB: 1,838,965 Number of extensions: 76938 Number of successful extensions: 280 Number of sequences better than 1.0e-08: 6 Number of HSP's gapped: 246 Number of HSP's successfully gapped: 6 Length of query: 965 Length of database: 1,000,347 Length adjustment: 91 Effective length of query: 874 Effective length of database: 700,502 Effective search space: 612238748 Effective search space used: 612238748 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 133 (55.8 bits)