BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1270.p
         (531 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094295|ref|YP_001099370.1| glutamate--cysteine ligase [Her...   658   0.0  

>gi|134094295|ref|YP_001099370.1| glutamate--cysteine ligase
           [Herminiimonas arsenicoxydans]
          Length = 517

 Score =  658 bits (1698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/510 (63%), Positives = 383/510 (75%), Gaps = 5/510 (0%)

Query: 17  HLALLGQGLRGVERETLRVDRQGQLAQTPHPAALGSALTNELITTDYSEALLEFITPAMP 76
           H +LL QG RG+ERETLRVD QG+LA  PHPAALGSALTN  ITTDYSE+LLEFITPA  
Sbjct: 6   HRSLLDQGRRGIERETLRVDMQGRLALDPHPAALGSALTNPHITTDYSESLLEFITPAEH 65

Query: 77  DIADALQRLDEIHRFAYPRLAGEFLWNASMPCVLPEEEQIPLAWYGNSHIGMLKHVYRRG 136
           DIA  L  LD IHRF   RL  E LW+ SMPC+LP+E  IP+AWYG SHIGM+KHVYRRG
Sbjct: 66  DIATVLDELDRIHRFTNARLEHELLWSQSMPCILPDEADIPIAWYGTSHIGMIKHVYRRG 125

Query: 137 LALRYGRTMQCIAGIHYNFSLSEDLWEVLR-DEDDTVDPSLSRRDYQSERYIALIRNFRR 195
           LALRYG+ MQCIAG+HYN+SLSEDLW VL+ D + T D     + +QSE YIALIRNF R
Sbjct: 126 LALRYGKAMQCIAGLHYNYSLSEDLWRVLKKDANSTADD----KTFQSESYIALIRNFHR 181

Query: 196 YSWLLMYLFGASPAVATNFLRGRPHQLETLSEDTLYLPYGTSLRMSDLGYQNHAQANITP 255
           YSWLLMYLFGASPA++ +FLRGR H+LETLS+DTLYLPY TSLRMSDLGYQN AQA +  
Sbjct: 182 YSWLLMYLFGASPALSMHFLRGRQHELETLSDDTLYLPYATSLRMSDLGYQNDAQAGLMQ 241

Query: 256 HYNNLPAYIRSLSHAVSQPYPPYEAIGTKRDGQWVQINTNILQIENEFYSSIRPKRVINS 315
            YN+L +Y+RSLS AV QPYP YEAIGT+RDG+W+Q+NTN+LQIENE+Y++IRPKRVINS
Sbjct: 242 PYNDLESYMRSLSRAVRQPYPAYEAIGTRRDGEWIQLNTNLLQIENEYYATIRPKRVINS 301

Query: 316 GERPVQALSARGVQYVEVRCMDIDPFNPLGIGLEAARFLDVFLHFLALEASCLTSDEEGA 375
           GERPV+AL ARGVQY+EVRCMDIDPF PLGI LE +RFLD FL F AL+ S  T +    
Sbjct: 302 GERPVEALCARGVQYIEVRCMDIDPFEPLGISLETSRFLDAFLLFCALDESPFTDEASHR 361

Query: 376 ENRANFLATVKEGRRPGLQLHCKGESIVLTDWGNQLLDRMAPVAELLDRHLGGSQHRDSL 435
           E   NF  TVK+GRRPGL L   G  I L  WG +LL+++  VA +LD       H  +L
Sbjct: 362 EKTENFARTVKQGRRPGLLLQRDGAPIALQAWGLELLEKIQAVAHVLDATSKDQPHTRAL 421

Query: 436 AVQRGKLADPDTTPSARVLREIRAAGNSFPGYTLANSQRQAEELLARPLAAERSAEFDAI 495
           A Q+ KL  P+ TPSARVL E++    SF  + +  S   AE   ARPL+ E +A F+ +
Sbjct: 422 ATQKEKLLHPELTPSARVLAELQTTDQSFEQFGMRQSIAHAEYFRARPLSTEENAYFNTL 481

Query: 496 AQASLAAQRDIERTQEGDFDTFVAAYRAST 525
           AQ S+AAQ ++ERTQ  DFD FV AY   T
Sbjct: 482 AQDSIAAQAEMERTQSDDFDAFVLAYSTRT 511


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.320    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 981,410
Number of extensions: 39148
Number of successful extensions: 91
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 90
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 1,000,347
Length adjustment: 86
Effective length of query: 445
Effective length of database: 716,977
Effective search space: 319054765
Effective search space used: 319054765
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 131 (55.1 bits)