BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1252.p
         (337 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094119|ref|YP_001099194.1| serine/threonine protein kinase...   508   e-145

>gi|134094119|ref|YP_001099194.1| serine/threonine protein kinase
           [Herminiimonas arsenicoxydans]
          Length = 330

 Score =  508 bits (1309), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 246/320 (76%), Positives = 277/320 (86%)

Query: 16  SFATLSPDTVLDALDALGLYGDGRLLALNSYENRVYQVGMEDGPPLVAKFYRPLRWTDEQ 75
           SFATL+PD VLDAL+++GLY DGRLLALNSYENRVYQ+G+EDGPPLVAKFYRP RW+D  
Sbjct: 8   SFATLTPDCVLDALESVGLYSDGRLLALNSYENRVYQIGIEDGPPLVAKFYRPARWSDAA 67

Query: 76  ILEEHAFSQELADEEVPVVPALRLDNGATLHRHAGFRFAVFRRHGGRAPELDDADTLERL 135
           ILEEHAF  +L + E+PVVPA+ L NG TLH  +GFRFAVF RHGGRAPELDD  TLE L
Sbjct: 68  ILEEHAFVAKLVEREIPVVPAMTLANGKTLHEFSGFRFAVFARHGGRAPELDDPATLEWL 127

Query: 136 GRFIGRIHAVGMRRPFVARPALDIATFGEEPRDWLLAHDFIPAELLNAYRSTVDQALDGV 195
           GRFIGRIHAVG  + F  RPAL+IATFGEEPRD+LLA++FIP +LL+AYRS + QALDGV
Sbjct: 128 GRFIGRIHAVGALQTFEHRPALNIATFGEEPRDYLLANNFIPPDLLDAYRSVIAQALDGV 187

Query: 196 RQCYQRAGNSRQLRLHGDCHVGNVLWTDAGPHFVDFDDSRSGPAVQDLWMLLSGERAEMA 255
           R+C+ RAG+   LRLHGDCH GNVLWTDAGPHFVDFDDSR GPA+QDLWMLLSGER +M 
Sbjct: 188 RRCFDRAGDVSILRLHGDCHCGNVLWTDAGPHFVDFDDSRMGPAIQDLWMLLSGERRDMV 247

Query: 256 RQLGDLLTGYESFCEFDPRELNLLEALRTLRLIHYSAWLARRWNDPAFPVAFPWFGSVRY 315
           RQL DLL GYE F +FD REL+L+EALRTLRLIHY+AWLARRW+DPAFPVAFPWF + RY
Sbjct: 248 RQLSDLLAGYEDFADFDVRELHLIEALRTLRLIHYAAWLARRWDDPAFPVAFPWFNTQRY 307

Query: 316 WQDRILELREQVALMQEAPF 335
           WQDRILELREQVALM EAP 
Sbjct: 308 WQDRILELREQVALMDEAPL 327


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.323    0.140    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 635,415
Number of extensions: 26583
Number of successful extensions: 57
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 57
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 1,000,347
Length adjustment: 82
Effective length of query: 255
Effective length of database: 730,157
Effective search space: 186190035
Effective search space used: 186190035
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 129 (54.3 bits)