BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1202.p (640 letters) Database: BlastDatabases/690/690 3295 sequences; 1,000,347 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|134095629|ref|YP_001100704.1| ABC transporter ATP-binding pro... 990 0.0 gi|134096461|ref|YP_001101536.1| putative ABC transporter ATP-bi... 340 1e-94 gi|134094319|ref|YP_001099394.1| ABC transporter ATP-binding pro... 247 1e-66 gi|134094544|ref|YP_001099619.1| ABC transporter ATP-binding pro... 230 2e-61 gi|134095501|ref|YP_001100576.1| oligopeptide ABC transporter AT... 94 2e-20 >gi|134095629|ref|YP_001100704.1| ABC transporter ATP-binding protein [Herminiimonas arsenicoxydans] Length = 633 Score = 990 bits (2560), Expect = 0.0, Method: Compositional matrix adjust. Identities = 495/640 (77%), Positives = 557/640 (87%), Gaps = 11/640 (1%) Query: 1 MAVISLTDAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLL 60 MAVISL++AQLAFGHV LLD AEFSLE ER+GLIGRNGTGKSSLLKIIAG SKLDDGL Sbjct: 1 MAVISLSNAQLAFGHVPLLDKAEFSLEATERVGLIGRNGTGKSSLLKIIAGTSKLDDGLF 60 Query: 61 VMQQGLKIAYVDQEPHFPAEMTVFDAVASGLGELPALLAEYEAITGQFGGDNDDALLERM 120 VMQQG+KIAYV+QEPHF E +V+DAVASG+G++ LL EY+A+TGQFGGD+DDAL+ERM Sbjct: 61 VMQQGIKIAYVEQEPHFSPETSVYDAVASGMGDMQVLLTEYDALTGQFGGDDDDALMERM 120 Query: 121 HQIQTVLDAADAWSIGNKVETTLDKLNLNREARIGELSGGMKKRVALACGLVGNPDVLLL 180 H IQ LDAADAW++ +KVE TLD+LNL +++ +G LSGGM+KRVALA LV PDVLLL Sbjct: 121 HDIQVKLDAADAWNLNHKVEATLDRLNLVKDSLMGTLSGGMQKRVALARALVSAPDVLLL 180 Query: 181 DEPTNHLDFGSILWLEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFPGNFTT 240 DEPTNHLDF SILWLEGLLRD+KGS+LFITHDRSFLDNV+TRIIELDRG++LSFPGNF+ Sbjct: 181 DEPTNHLDFTSILWLEGLLRDYKGSVLFITHDRSFLDNVATRIIELDRGRLLSFPGNFSA 240 Query: 241 YQTRKAELLANEEVENAKFDKFLAQEEVWIRKGVQARRTRDEGRVRRLEALRVQRSERRE 300 YQ RKAE L EEVENAKFDKFLAQEEVWIRKGVQARRTRDEGRVRRLEALR+ RS RR+ Sbjct: 241 YQVRKAEQLEIEEVENAKFDKFLAQEEVWIRKGVQARRTRDEGRVRRLEALRLSRSARRD 300 Query: 301 RQGQVKLEVGTGERSGKIVAELENVNKAYGPKTIVRDFSTILMRGDKVGLIGQNGAGKTT 360 +QGQVKL+V +G+RSGKIVAE+EN+NK YG K IV+DFS ++RGDKVGLIG NGAGKTT Sbjct: 301 QQGQVKLDVSSGDRSGKIVAEMENINKVYGDKVIVKDFSATILRGDKVGLIGLNGAGKTT 360 Query: 361 LLKLILGEEAPDSGTVKQGTKMQVAYFDQMRAQLNEETTLADTIAPGSDWVEVNGQRKHV 420 LLK+ILGEE PDSGTVKQGTK+Q+AYFDQMRAQLNEE +LADTIAPGSDWVE+NGQRKHV Sbjct: 361 LLKMILGEEEPDSGTVKQGTKLQIAYFDQMRAQLNEEMSLADTIAPGSDWVEINGQRKHV 420 Query: 421 MTYLSDFLFAPERARSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDLDIDTLELLE 480 MTYL+DFLFAPERARSPV++LSGGERNRLLLARLFAKPANVLVLDEPTNDLDIDTLELLE Sbjct: 421 MTYLNDFLFAPERARSPVKSLSGGERNRLLLARLFAKPANVLVLDEPTNDLDIDTLELLE 480 Query: 481 ELLEEYDGTVFLVSHDRMFLDNVVTQVIAAEGNGVWREYVGGYSDWERQRPTQQAAVSKA 540 ELLE+Y+GTVFLVSHDR FLDNVVTQVI AEGNG+WREY+GGYSDWER RP AA+ Sbjct: 481 ELLEDYEGTVFLVSHDRTFLDNVVTQVIVAEGNGLWREYIGGYSDWERVRP---AAIPAG 537 Query: 541 AAKAADKSESKAESTMAAPVVAAPVAK-KKLSYKEQRELDELPKRIAALEAEQKEISAKL 599 + K K E K E VAAPV K KKLSYKEQRE+D LP IA LE EQK I+ KL Sbjct: 538 SPKGTGKVEVKTE-------VAAPVTKQKKLSYKEQREMDALPVLIAQLEEEQKAITEKL 590 Query: 600 ADPDLYKKSADEAVKLNQRFAEIDEELLVSLERWEEIEGK 639 AD +Y + ADEA +LNQRFAEID LL +LE+WE IE + Sbjct: 591 ADASIYTRQADEAKRLNQRFAEIDGLLLEALEKWETIEAR 630 >gi|134096461|ref|YP_001101536.1| putative ABC transporter ATP-binding protein [Herminiimonas arsenicoxydans] Length = 555 Score = 340 bits (873), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 206/528 (39%), Positives = 302/528 (57%), Gaps = 8/528 (1%) Query: 18 LLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLLVMQQGLKIAYVDQEPHF 77 +L S G +IG++G NG+GKS+LLKI+AG G L I Y+ QEP Sbjct: 21 ILKDISLSFFPGAKIGVLGLNGSGKSTLLKIMAGIDTDIIGEARPAPNLNIGYLPQEPQL 80 Query: 78 PAEMTVFDAVASGLGELPALLAEYEAITGQFG-GDND-DALLERMHQIQTVLDAADAWSI 135 E TV AV GLGE+ A EA+ + D D DAL +++ ++ + + Sbjct: 81 DPEQTVRQAVEGGLGEVFEAKALLEAVYAAYAEPDADFDALAAEQGRLEAIISTSAGDNP 140 Query: 136 GNKVETTLDKLNLNR-EARIGELSGGMKKRVALACGLVGNPDVLLLDEPTNHLDFGSILW 194 ++E D L L +A+IG LSGG K+RVAL L+ PD+LLLDEPTNHLD S+ W Sbjct: 141 EQQLEMAADALRLPPWDAKIGVLSGGEKRRVALCRLLLSKPDMLLLDEPTNHLDAESVDW 200 Query: 195 LEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFPGNFTTYQTRKAELLANEEV 254 LE L+ F G+++ ITHDR FLDN + I+ELDRG + + GN++++ +K + L EE Sbjct: 201 LEQFLQRFPGTVVAITHDRYFLDNAAEWILELDRGSGIPWKGNYSSWLEQKGDRLKQEEA 260 Query: 255 ENAKFDKFLAQEEVWIRKGVQARRTRDEGRVRRLEALRVQRSERRERQGQVKLEVGTGER 314 + K +A+E W+R+ + R+ + + R+ R L ++R ++ + V ER Sbjct: 261 TESSRQKTIAKELEWVRQNPKGRQAKSKARLARFNELSEHEYQKRNETQEIFIPVA--ER 318 Query: 315 SGKIVAELENVNKAYGPKTIVRDFSTILMRGDKVGLIGQNGAGKTTLLKLILGEEAPDSG 374 G V E +NV+KA+G + ++ + + + G VG+IG NGAGK+TL K+I G+E PDSG Sbjct: 319 LGNEVIEFKNVSKAFGDRLLIDNLNFRIPAGAIVGIIGPNGAGKSTLFKMITGKEQPDSG 378 Query: 375 TVKQGTKMQVAYFDQMRAQLNEETTLADTIAPGSDWVEVNGQRKHVMTYLSDFLFAPERA 434 V GT +V+ DQ R LN+ T+ + + G+D + V YL F F Sbjct: 379 EVVIGTTARVSIVDQSRDSLNDGKTVFEDVTGGADILTVGRFEMPSRAYLGRFNFKGGDQ 438 Query: 435 RSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDLDIDTLELLEELLEEYDGTVFLVS 494 + V LSGGER RL LA+ NVL+LDEP+NDLD++TL LE+ L E+ G+V ++S Sbjct: 439 QKVVGNLSGGERGRLHLAKTLLMGGNVLLLDEPSNDLDVETLRALEDALLEFAGSVMVIS 498 Query: 495 HDRMFLDNVVTQVIAAEGNGVWREYVGGYSDWE---RQRPTQQAAVSK 539 HDR FLD + T ++A EGN + G Y ++E R+R ++ A K Sbjct: 499 HDRWFLDRIATHILAFEGNSQVSFFDGNYQEYEADKRKRLGEEGAKPK 546 Score = 110 bits (274), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 77/257 (29%), Positives = 122/257 (47%), Gaps = 45/257 (17%) Query: 3 VISLTDAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLLVM 62 VI + AFG L+D+ F + G +G+IG NG GKS+L K+I G+ + D G +V+ Sbjct: 323 VIEFKNVSKAFGDRLLIDNLNFRIPAGAIVGIIGPNGAGKSTLFKMITGKEQPDSGEVVI 382 Query: 63 QQGLKIAYVDQEPHFPAEMTVFDAVASGLGELPALLAEYEAITGQFGGDNDDALLERMHQ 122 +++ VDQ + D+L + Sbjct: 383 GTTARVSIVDQ--------------------------------------SRDSLNDGKTV 404 Query: 123 IQTVLDAADAWSIGN---KVETTLDKLNL---NREARIGELSGGMKKRVALACGLVGNPD 176 + V AD ++G L + N +++ +G LSGG + R+ LA L+ + Sbjct: 405 FEDVTGGADILTVGRFEMPSRAYLGRFNFKGGDQQKVVGNLSGGERGRLHLAKTLLMGGN 464 Query: 177 VLLLDEPTNHLDFGSILWLEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILS-FP 235 VLLLDEP+N LD ++ LE L +F GS++ I+HDR FLD ++T I+ + +S F Sbjct: 465 VLLLDEPSNDLDVETLRALEDALLEFAGSVMVISHDRWFLDRIATHILAFEGNSQVSFFD 524 Query: 236 GNFTTYQTRKAELLANE 252 GN+ Y+ K + L E Sbjct: 525 GNYQEYEADKRKRLGEE 541 >gi|134094319|ref|YP_001099394.1| ABC transporter ATP-binding protein [Herminiimonas arsenicoxydans] Length = 533 Score = 247 bits (630), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 167/545 (30%), Positives = 275/545 (50%), Gaps = 40/545 (7%) Query: 3 VISLTDAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLLVM 62 ++S + + FG L ++ G R GLIG NG GKS+ +KI+ G G +++ Sbjct: 1 MLSTANITMQFGPKPLFENISVKFGDGNRYGLIGANGCGKSTFMKILGGDLDPSAGTVML 60 Query: 63 QQGLKIAYVDQEPHFPAEMTVFDAVASGLGELPALLAEYEAITGQFGGDNDDALLERMHQ 122 ++ + Q+ EM V D V G E+ A ++E +AI +DD + Sbjct: 61 DPNERLGKLRQDQFAFEEMRVLDVVMMGHTEMWAAMSERDAIYANPEATDDD------YM 114 Query: 123 IQTVLDAADAWSIGNKVETTLDKLNLN-------REARIGELSGGMKKRVALACGLVGNP 175 L+A A G E+ +L L + + +S G K RV LA L NP Sbjct: 115 KAADLEAKFAEYDGYTAESRAGELLLGAGVAIDLHQGPMSNVSPGWKLRVLLAQALFSNP 174 Query: 176 DVLLLDEPTNHLDFGSILWLEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFP 235 D+LLLDEPTN+LD +I WLE +L + +++ I+HDR FL+ V T + ++D G + +P Sbjct: 175 DILLLDEPTNNLDINTIRWLEDVLNERNSTMIIISHDRHFLNQVCTHVADMDYGTLKIYP 234 Query: 236 GNFTTYQTRKAELLANEEVENAKFDKFLAQEEVWIRK--GVQARRTRDEGRVRRLEALRV 293 GN+ Y + + NAK +A+ + ++R+ +++ + R +++E ++V Sbjct: 235 GNYDDYMFASTQARNQQLANNAKAKDKVAELQEFVRRFAANKSKARQATSRAKQIEKIKV 294 Query: 294 QRSERRER-------QGQVKLEVGTGERSGKIVAELENVNKAYGPKTIVRDFSTILMRGD 346 + R G+ KL ++ E E ++KAY + + ++FS ++ G+ Sbjct: 295 DDIKPSSRAYPFVRFDGEKKLH--------RLAVEAETISKAY-DRQLFKNFSIMVEAGE 345 Query: 347 KVGLIGQNGAGKTTLLKLILGEE----APDSGTVKQGTKMQVAYFDQMRAQ-LNEETTLA 401 ++ +IG NGAGKTTLL+ I GEE A D G VK V Y Q + + L Sbjct: 346 RIAIIGANGAGKTTLLRCIGGEEITGLAADQGRVKWAENANVGYMPQDPTEDFASDKNLT 405 Query: 402 DTIAPGSDWVEVNGQRKHVMTYLSDFLFAPERARSPVRTLSGGERNRLLLARLFAKPANV 461 D + W + + V + L LF + + VR LSGGE+ R+ +L NV Sbjct: 406 DWMG---QWTQEGDDDQAVRSILGRLLFGGDDVKKSVRVLSGGEKGRMTYGKLMLGRHNV 462 Query: 462 LVLDEPTNDLDIDTLELLEELLEEYDGTVFLVSHDRMFLDNVVTQVIAAEGNGVWREYVG 521 L++DEPTN +D++++E L LE+Y GT+ VSHDR F+ ++ T+V+ + +G ++ G Sbjct: 463 LLMDEPTNHMDMESIESLNIALEKYAGTLIFVSHDREFVSSLATRVLELK-DGEIIDFQG 521 Query: 522 GYSDW 526 Y D+ Sbjct: 522 TYEDY 526 >gi|134094544|ref|YP_001099619.1| ABC transporter ATP-binding protein [Herminiimonas arsenicoxydans] Length = 656 Score = 230 bits (587), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 170/536 (31%), Positives = 265/536 (49%), Gaps = 47/536 (8%) Query: 18 LLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLLVMQQGLKIAYVDQEPHF 77 LLD + +L G++IGLIG NG GKSSL ++ G D G + ++AYV QE Sbjct: 7 LLDKVDVTLNPGDKIGLIGANGAGKSSLFGLLRGELHADLGTIDFPSKWRVAYVAQETP- 65 Query: 78 PAEMTVFDAVASGLGELPALLAEYEAITGQFGGDNDDALLERMHQIQTVLDAADAWSIGN 137 P E + D G L L E + + ++ L+ ++ + L ADA+++ + Sbjct: 66 PLERSAIDYAIDGDVTLRRLEEELAFLESEPDTADNGTLIGDLY---SALADADAYTVRS 122 Query: 138 KVETTLDKLNLNR---EARIGELSGGMKKRVALACGLVGNPDVLLLDEPTNHLDFGSILW 194 + E L L E + SGG + R+ LA L+ D+LLLDEPTNHLD +I+W Sbjct: 123 RGEQLLLGLGFTMAQMEQPVASFSGGWRMRLNLAQALMCPSDLLLLDEPTNHLDLDAIIW 182 Query: 195 LEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFPGNFTTYQTRKAE--LLANE 252 LE L+ + G++L I+HDR FLD V I+ +D K+ + GN++ ++ ++A +LA Sbjct: 183 LEDWLKRYPGTLLVISHDRDFLDGVVNVIVHIDERKLKRYSGNYSGFERQRAAQMILAQS 242 Query: 253 EVEN-----AKFDKFLAQEEVWIRKGVQAR-RTRDEGRVRRLEALRVQRSERRERQGQVK 306 +E A + F+ + + K QA+ R + ++ L LR + Sbjct: 243 ALEKQTRQRAHLESFINRFKAQASKARQAQSRMKALSKMEELAPLRA--------AAEFS 294 Query: 307 LEVGTGERSGKIVAELENVNKAY---------GPKTIVRDFSTILMRGDKVGLIGQNGAG 357 E + + +ENV+ Y K IV + L G ++GL+G NGAG Sbjct: 295 FEFREPANAPNPLLVMENVDAGYRIENEDYSITEKKIVSGINFSLQIGQRIGLLGVNGAG 354 Query: 358 KTTLLKLILGEEAPDSGTVKQGTKMQVAYFDQMRAQL--NEETTLAD--TIAPGSDWVEV 413 K+TL+K I E P SG + G + + YF Q + ++ +EE+ L IAP Sbjct: 355 KSTLIKTIAAELQPLSGVSEFGKGLAIGYFAQHQVEMLRHEESPLWHLAHIAP------- 407 Query: 414 NGQRKHVMTYLSDFLFAPERARSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDLDI 473 N + + + +L F F S + SGGE+ RL LA + + N+L+LDEPTN LD+ Sbjct: 408 NVREQELRNFLGSFNFNGAMVTSKIAPFSGGEKARLALALIVWQRPNLLLLDEPTNHLDL 467 Query: 474 DTLELLEELLEEYDGTVFLVSHDRMFLDNVVTQVIAAEGNGVWREYVG---GYSDW 526 +T E L L +++GT+ +VSHDR L + I +G + + G Y DW Sbjct: 468 ETREALTMALAQFEGTLVVVSHDRHLLRATTDEFIIV-ADGKLQPFDGDLDDYKDW 522 >gi|134095501|ref|YP_001100576.1| oligopeptide ABC transporter ATP-binding protein [Herminiimonas arsenicoxydans] Length = 534 Score = 94.0 bits (232), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 135/549 (24%), Positives = 232/549 (42%), Gaps = 126/549 (22%) Query: 1 MAVISLTDAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKS----SLLKI-----IAG 51 M ++ + + Q++F +++ FS+ GE+ L+G +G+GK+ S+L++ AG Sbjct: 1 MNLLEIQNLQVSFDTSKVVNDVSFSIAAGEKFALVGESGSGKTVTALSILRLNQDAAYAG 60 Query: 52 RSKLDDGLLVMQQ---------GLKIAYVDQEPHFPAEMTVFDAVASGLGELPALLAEYE 102 R L +G ++Q+ G +A + QEP MT + + + ++ L +E Sbjct: 61 RI-LFEGQDILQRSEAAMRAVRGKDVAMIFQEP-----MTALNPLFTIGNQIAEGLMLHE 114 Query: 103 AITGQFGGDNDDALLERMHQIQTVLDAADAWSIGNKVETTLDKLNLNREARIGELSGGMK 162 ++ + LL++ T + + + +LSGG + Sbjct: 115 GLSARIAALRAIELLDK---------------------TGIPEPQRRALSYPHQLSGGQR 153 Query: 163 KRVALACGLVGNPDVLLLDEPTNHLDFGS----ILWLEGLLRDFKGSILFITHDRSFLDN 218 +R +A L P +L+ DEPT LD + L L R+ ++L ITHD + + + Sbjct: 154 QRAMIAMALACKPKLLIADEPTTALDVTIQVQIVELLNQLQREENMAVLMITHDLNLVRH 213 Query: 219 VSTRIIELDRGKILSFPGNFTTYQTRKAELLANEEVENAKFDKFLAQEEVWIRKGV---- 274 + R+ +++G ++ E+ A E+ F A E + RK + Sbjct: 214 FADRVGVMEKGCLV--------------EVAATREL-------FTAPRETYTRKLLASQP 252 Query: 275 -QARRTRDEGRVRRLEALRVQRSERRERQGQVKLEVGTGERSGKIVAELENVNKAYGPKT 333 Q T +E V L A V R +QG K P Sbjct: 253 QQLVNTLNESAVPLLSAEHV-RCTFDIKQGWFKTT----------------------PFV 289 Query: 334 IVRDFSTILMRGDKVGLIGQNGAGKTTL-LKLILGEEAPDSGTVKQGTK----------- 381 V D S + G+ +G++G++G+GKTTL L L+ A SGT+ K Sbjct: 290 AVDDVSVQVRPGETLGIVGESGSGKTTLGLALLRLSSARVSGTIAFDGKPLNAMQSDALR 349 Query: 382 -----MQVAYFDQMRAQLNEETTLADTIAPG----SDWVEVNGQRKHVMTYLSDFLFAPE 432 MQ+ + D A L+ T+ + G + G RK V L + P+ Sbjct: 350 PLRARMQIVFQDPF-ASLSPRRTIEQIVGEGLALHQPQLGAAGIRKAVADALLEVGLPPD 408 Query: 433 -RARSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDLDID----TLELLEELLEEYD 487 AR P SGG+R R+ +AR+ ++++LDEPT+ LD+ L+LL EL ++Y+ Sbjct: 409 IMARYP-HEFSGGQRQRIAIARVLVLKPDLVLLDEPTSSLDVSVQQQVLQLLLELQKKYE 467 Query: 488 GTVFLVSHD 496 +SHD Sbjct: 468 LAYIFISHD 476 Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 33/215 (15%) Query: 321 ELENVNKAYGPKTIVRDFSTILMRGDKVGLIGQNGAGKT-TLLKLI-LGEEAPDSGTV-- 376 E++N+ ++ +V D S + G+K L+G++G+GKT T L ++ L ++A +G + Sbjct: 5 EIQNLQVSFDTSKVVNDVSFSIAAGEKFALVGESGSGKTVTALSILRLNQDAAYAGRILF 64 Query: 377 ---------------KQGTKMQVAYFDQMRAQLNEETTLADTIAPGSDWVEVNGQRKHVM 421 +G + + + + M A LN T+ + IA G E R + Sbjct: 65 EGQDILQRSEAAMRAVRGKDVAMIFQEPMTA-LNPLFTIGNQIAEGLMLHEGLSARIAAL 123 Query: 422 --TYLSDFLFAPE---RARSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDLD---- 472 L D PE RA S LSGG+R R ++A A +L+ DEPT LD Sbjct: 124 RAIELLDKTGIPEPQRRALSYPHQLSGGQRQRAMIAMALACKPKLLIADEPTTALDVTIQ 183 Query: 473 IDTLELLEELLEEYDGTVFLVSHD----RMFLDNV 503 + +ELL +L E + V +++HD R F D V Sbjct: 184 VQIVELLNQLQREENMAVLMITHDLNLVRHFADRV 218 Database: BlastDatabases/690/690 Posted date: Apr 9, 2011 4:48 AM Number of letters in database: 1,000,347 Number of sequences in database: 3295 Lambda K H 0.316 0.134 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3295 Number of Hits to DB: 1,151,287 Number of extensions: 46906 Number of successful extensions: 431 Number of sequences better than 1.0e-08: 27 Number of HSP's gapped: 390 Number of HSP's successfully gapped: 36 Length of query: 640 Length of database: 1,000,347 Length adjustment: 88 Effective length of query: 552 Effective length of database: 710,387 Effective search space: 392133624 Effective search space used: 392133624 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 132 (55.5 bits)