BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1195.p
         (629 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094400|ref|YP_001099475.1| cell division protease [Hermini...  1129   0.0  

>gi|134094400|ref|YP_001099475.1| cell division protease
           [Herminiimonas arsenicoxydans]
          Length = 635

 Score = 1129 bits (2921), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 537/619 (86%), Positives = 583/619 (94%)

Query: 1   VNNMFSKAAIWVVIALVLFMVFKQFDSRSMATNAKPIAYSDFISEVKAGHIKDATIEDRN 60
           +NNMFSKAAIWVVI +VLF VFKQFD R+++  A  I YSDF+ EVK+  IK+ATIEDR 
Sbjct: 1   MNNMFSKAAIWVVIGMVLFTVFKQFDGRTVSGAATAIPYSDFLDEVKSKRIKEATIEDRT 60

Query: 61  IIATTQDGTKVKTATTVLDRGLVGDLLNNGVKFDVRQPEEQSFLSQIFISWFPMLLLIGV 120
           I+ATT +G KVK+A T LDRGL+GDL+NNGVKFDV+QPEEQSFLSQIFISWFPMLLLIGV
Sbjct: 61  IVATTTEGKKVKSAITYLDRGLIGDLVNNGVKFDVKQPEEQSFLSQIFISWFPMLLLIGV 120

Query: 121 WIFFMRQMQGGGKGGAFSFGKSKARMLDENSNSVTFADVAGCDEAKEEVQELVEFLRDPT 180
           W+FFMRQMQGGGKGGAFSFGKSKAR+LD+ +N+VTFADVAGCDEAKEEV ELVEFLRDPT
Sbjct: 121 WVFFMRQMQGGGKGGAFSFGKSKARLLDDTTNTVTFADVAGCDEAKEEVTELVEFLRDPT 180

Query: 181 KFQKLGGRIPHGVLMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRD 240
           +FQKLGGRIP GVL+VGPPGTGKTLLARAIAGEAKVPFF+ISGSDFVEMFVGVGASRVRD
Sbjct: 181 RFQKLGGRIPRGVLLVGPPGTGKTLLARAIAGEAKVPFFSISGSDFVEMFVGVGASRVRD 240

Query: 241 MFENAKKHAPCIIFIDEIDAVGRHRGAGMGGGNDEREQTLNQMLVEMDGFEANSGVIVIA 300
           MF+NAKKHAPCIIFIDEIDAVGRHRGAGMGGGNDEREQTLNQMLVEMDGFE N+GVIV+A
Sbjct: 241 MFDNAKKHAPCIIFIDEIDAVGRHRGAGMGGGNDEREQTLNQMLVEMDGFEPNAGVIVVA 300

Query: 301 ATNRADVLDKALLRPGRFDRQVMVGLPDIRGREQILYVHMRKVPIAPDVKADILARGTPG 360
           ATNRADVLDKALLRPGRFDRQV+VGLPDIRGREQIL VHMRKVPIA DVKADILARGTPG
Sbjct: 301 ATNRADVLDKALLRPGRFDRQVIVGLPDIRGREQILMVHMRKVPIATDVKADILARGTPG 360

Query: 361 FSGADLANLVNEAALFAARRNKRLVEMQDFEDAKDKIVMGPERKSAVMREEERRNTAYHE 420
           FSGADLANLVNEAALFAARRNKRLVEMQDFEDAKDKIVMGPERKSAVMREEERRNTAYHE
Sbjct: 361 FSGADLANLVNEAALFAARRNKRLVEMQDFEDAKDKIVMGPERKSAVMREEERRNTAYHE 420

Query: 421 SGHAVVAKLLPKADPVHKVTIMPRGYALGLTWQLPEHDRVNMYKDKMLEEISILFGGRIA 480
           SGHAVVAKLLPKADPVHKVTIMPRG+ALGLTWQLPEHDRVNMYKDKMLEEISILFGGRIA
Sbjct: 421 SGHAVVAKLLPKADPVHKVTIMPRGFALGLTWQLPEHDRVNMYKDKMLEEISILFGGRIA 480

Query: 481 EEIFMHQMSTGASNDFERATKLARAMVTRYGMSVTLGTMVYEDSEQDAYFGRMSSKTVSE 540
           EE+FMHQMSTGASNDFERATKLARAMVTRYGMS +LGTMVYED+EQDAYFGR S+KTVSE
Sbjct: 481 EEVFMHQMSTGASNDFERATKLARAMVTRYGMSESLGTMVYEDTEQDAYFGRSSAKTVSE 540

Query: 541 ATQQKVDAEIRSILDEQYALARRLLEENRDKVDVMAKALLEWETLDADQVNDIMNGDEPR 600
           ATQQKVD EIR+ILD QYAL+R+L+E+NRDKV++MAK LL+WET+D+DQ+NDIM G EPR
Sbjct: 541 ATQQKVDTEIRTILDTQYALSRKLIEDNRDKVELMAKTLLDWETIDSDQINDIMEGREPR 600

Query: 601 PPRNGTPTKKSSSDNNRSG 619
            P+ G P K+++SD   SG
Sbjct: 601 QPKYGIPVKRATSDTPSSG 619


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.319    0.135    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 1,110,582
Number of extensions: 44785
Number of successful extensions: 229
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 230
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1,000,347
Length adjustment: 87
Effective length of query: 542
Effective length of database: 713,682
Effective search space: 386815644
Effective search space used: 386815644
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 132 (55.5 bits)