BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1187.p
         (323 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094388|ref|YP_001099463.1| putative esterase [Herminiimona...   425   e-120

>gi|134094388|ref|YP_001099463.1| putative esterase [Herminiimonas
           arsenicoxydans]
          Length = 310

 Score =  425 bits (1092), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 215/307 (70%), Positives = 247/307 (80%), Gaps = 15/307 (4%)

Query: 12  VASSLLLSACGTSSLLPGSSSKPVESPGTPSASVVPVAPSATAAPTPRKIKIGLALGGGA 71
           + S + LS  G S+L+P +S               P AP A  A +   IK+ L LGGGA
Sbjct: 15  ILSCMALSIAGCSTLMPFTSE--------------PAAPVAVTAKSAAPIKVALVLGGGA 60

Query: 72  ARGFAHIGVIKALEAQGISVDVVAGTSAGSLVGALYAAGNNGFALQKLALAMDEAAISDW 131
           ARGFAHIGVIKALE+QGI  D+V GTSAGSLVGALYAAGNNGFAL K+ALAMDEAAISDW
Sbjct: 61  ARGFAHIGVIKALESQGIVPDMVVGTSAGSLVGALYAAGNNGFALHKMALAMDEAAISDW 120

Query: 132 SVPLFSKVSGVLKGEGVQNYVNKAVHNVPIEKFKIPFGAVATDLRTGQPILFQRGNAGVA 191
           SVP F+K SGVLKG+ +QNYVNK+V NV IEK KIPF AVATDL +G PILFQRGN G+A
Sbjct: 121 SVPFFAKSSGVLKGDALQNYVNKSVRNVTIEKMKIPFAAVATDLNSGLPILFQRGNTGLA 180

Query: 192 VRASSAVPGVFQSVRIGDHTYVDGGLVSPVPVRFARQMGADFVIAVNISANPEAQAASSS 251
           VRASSAVPG+FQ V+IG+  YVDGGLV+PVPVRFAR+MGADF++AVNIS  PEAQ A SS
Sbjct: 181 VRASSAVPGLFQPVKIGERIYVDGGLVAPVPVRFAREMGADFIVAVNISVQPEAQLA-SS 239

Query: 252 SIDVLLQTFAIMGQTINQYELKNADIVLQPSLGSMKGSDFASRNVAILAGEQAATAAMPE 311
           S+DVLLQTFAIMGQ+IN YELK+ADIV++P LG MKG+DF  RN+A+LAGEQAA A MPE
Sbjct: 240 SVDVLLQTFAIMGQSINHYELKDADIVIRPGLGMMKGNDFNGRNLAVLAGEQAAMALMPE 299

Query: 312 IKRKLKL 318
           IKRKLK+
Sbjct: 300 IKRKLKI 306


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.316    0.131    0.361 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 497,302
Number of extensions: 19187
Number of successful extensions: 88
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 87
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 1,000,347
Length adjustment: 82
Effective length of query: 241
Effective length of database: 730,157
Effective search space: 175967837
Effective search space used: 175967837
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 129 (54.3 bits)