BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1164.p (1049 letters) Database: BlastDatabases/690/690 3295 sequences; 1,000,347 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|134095559|ref|YP_001100634.1| aminoglycoside/multidrug efflux... 1330 0.0 gi|134095880|ref|YP_001100955.1| aminoglycoside/multidrug efflux... 1120 0.0 gi|134094275|ref|YP_001099350.1| multidrug ABC transporter membr... 331 1e-91 gi|134093332|ref|YP_001098407.1| putative acriflavin resistance/... 264 2e-71 gi|134094822|ref|YP_001099897.1| RND divalent metal cation efflu... 237 2e-63 >gi|134095559|ref|YP_001100634.1| aminoglycoside/multidrug efflux pump [Herminiimonas arsenicoxydans] Length = 1053 Score = 1330 bits (3443), Expect = 0.0, Method: Compositional matrix adjust. Identities = 652/1046 (62%), Positives = 820/1046 (78%), Gaps = 1/1046 (0%) Query: 1 MARFFIDRPIFAWVLAIIVMLAGAISVLTLPIAQYPAIAPPAIAITANYPGASAKTLEDT 60 MARFFIDRPIFAWVL+II+MLAG +++ TLPI+QYP IAPP ++I A YPGASAK +E++ Sbjct: 1 MARFFIDRPIFAWVLSIIIMLAGGLAIFTLPISQYPTIAPPTVSIQATYPGASAKVVENS 60 Query: 61 VTQVIEQKMKGLDRLSYMASTSESSGTVTITLTFENGTNPDTAQVQVQNKLSLATPLLPT 120 VTQ+IEQ MKGLD L YM++TS ++G+ +TLTF+N T+PD AQVQVQNKL LA+PLLP Sbjct: 61 VTQIIEQNMKGLDGLIYMSATSSATGSAQLTLTFDNKTDPDIAQVQVQNKLQLASPLLPQ 120 Query: 121 EVQQQGITVTKSATNFLNVLAFTSEDGSMSGSDLSDYVAANVQDAISRVQGVGDTTLFGS 180 EVQ+QG+ V+K+A+ FL V+ F SEDGSM D+SDYVAAN+ D +SRV GVG+ +FGS Sbjct: 121 EVQRQGVVVSKAASGFLQVVGFVSEDGSMDKDDISDYVAANLVDPLSRVPGVGNIQVFGS 180 Query: 181 QYAMRIWLDPNKLNSYALTPLDVKNAIQAQNVQVSSGQLGGLPAVENQQINATITAQTRL 240 +Y+MRIWLDPNKL++Y L D+ I+AQN QV+ GQLGG P+ QQ+NATI+AQ RL Sbjct: 181 KYSMRIWLDPNKLDTYKLATTDIIATIRAQNAQVAVGQLGGAPSAPGQQLNATISAQDRL 240 Query: 241 RTADQFRNIVLRTLTGGAQVKLRDVARIELGSESYTSVGRYNGKPAAGLAIKLATGANAL 300 +T +QFR IV+R+ G+ +KL D+AR+ELG+E+Y ++ RYNGKPA G+ I L+TGANAL Sbjct: 241 QTPEQFRAIVIRSNPDGSTLKLGDIARVELGAENYETISRYNGKPATGVLISLSTGANAL 300 Query: 301 DTVKAIDARVAQLEKFFPAGMKVQKPYDTTPFVRISIEEVVRTLVEAVVLVFLVMYLFLQ 360 DT I ++ +L+ +FPAG+ P+DTTPF+ +SI+ VV TL+EA+ LVFLVMYLF+Q Sbjct: 301 DTAVGIKNKLEELKPYFPAGLTAVVPFDTTPFISVSIKGVVVTLLEAIALVFLVMYLFMQ 360 Query: 361 NFRATLIPTIAVPVVLLGTFGVLAAFGFTINTLTMFAMVLAIGLLVDDAIVVVENVERVM 420 N RATLIPTIAVPVVLLGTFG+LAA GF+IN LTMFAMVLAIGLLVDDAIVVVENVER+M Sbjct: 361 NIRATLIPTIAVPVVLLGTFGILAALGFSINMLTMFAMVLAIGLLVDDAIVVVENVERIM 420 Query: 421 SEDGLPPKEATRKSMGQITGALVGVALVLAAVFVPMAFFSGSTGVIYRQFSITIVSAMTL 480 +E+GL P EATRKSM QITGALVG+ALVL+AVFVPMAF GSTG+IYRQF+ TIVSAM L Sbjct: 421 TEEGLSPLEATRKSMDQITGALVGIALVLSAVFVPMAFLGGSTGIIYRQFTATIVSAMAL 480 Query: 481 SVLVAIVLTPALCATLLKPAAKGHALATSGFFGWFNRQFDRGNRRYQGVVRHMLGRGWRY 540 SVLVA+VLTPALCAT+LKP KG T+GFF WFNR FDR + +YQ VR +LGRG R+ Sbjct: 481 SVLVAVVLTPALCATMLKPVKKGEHGKTTGFFAWFNRNFDRSSVKYQSGVRGILGRGKRF 540 Query: 541 MAAYAVLLALVVTGFMKLPVGFLPDEDQGSLFAIMQLPAGATKARTDDVIHQVEHHFLVD 600 MA + L+ ++V F++LP FLP+EDQG LF+++Q P GAT+ RT + I +VEHHFL D Sbjct: 541 MAIFLALIVVMVLLFVRLPSSFLPNEDQGILFSLIQTPVGATQERTLEAIKKVEHHFLTD 600 Query: 601 QKDAVAGVFSVSGFSFAGSGQNMGFAFIKLKPWDERKGPGLSVTDVVNKAGAAFAKIRDA 660 +KDAV +F+V GFSFAG+GQN G AFIKLK W ER + V +A AF++I+DA Sbjct: 601 EKDAVESIFTVQGFSFAGTGQNNGMAFIKLKDWSERTSAESQIDAVAGRAMGAFSQIKDA 660 Query: 661 KVFAFAPPAVAELGNATGFDLMLKDEANLGHAALMQARNQLLATLTKDKRLVAVRPNGLE 720 FAFAPPA+ ELG A GF LKD ANLGH AL+QARNQLL + K L VRPNG E Sbjct: 661 FAFAFAPPAIPELGTAAGFSFFLKDNANLGHDALVQARNQLLGAAAQSKLLAKVRPNGQE 720 Query: 721 DTPEFRLQVDTEKAGALGVSMSDINDTIATAWGSSYVNDFIDKGRVKKVMLQADAQYRML 780 D+P+FR+ +DT+KA A G+S++DIN T++TAWG Y++DFID+GRVK+V +QADA +RM+ Sbjct: 721 DSPQFRIDIDTQKASAQGLSIADINSTLSTAWGGQYIDDFIDRGRVKRVYMQADAPFRMV 780 Query: 781 PSDLDRWYVRNSAGTMVPFSAFSSAHWTSGSPRLERYNGVPSMEILGMALPGAASSGQAM 840 P D W VRN+ G MVPFSAF+SA W GSPRLERYNGV +MEI G A PG SSG +M Sbjct: 781 PEDFKLWSVRNNQGQMVPFSAFASARWEYGSPRLERYNGVSAMEIQGEAAPG-ISSGASM 839 Query: 841 DIVEAALAKMPPGIGYEWTGLSLQEKASSGKTGILYSISILIVFLALAALYESWAVPFSV 900 D +E ++P G G EWT LS QE+ + +T +LY++S+LIVFL LAALYESW +P +V Sbjct: 840 DEIERLAGQLPAGFGIEWTALSYQERQAGSQTTLLYTLSLLIVFLCLAALYESWTIPTAV 899 Query: 901 ILVVPLGVFGALVGAILTWKMNDVYFQVGLLTTIGLACKNAILIVEFAKDLYEHGKNLVE 960 +LV PLG+ GA++ L DVYFQV +LTT+GL KNAILIVEFAK E G L++ Sbjct: 900 LLVAPLGILGAVLANTLAGMERDVYFQVAMLTTVGLTSKNAILIVEFAKANLESGMELID 959 Query: 961 ATMEAVRMRLRPILMTSMAFILGVLPMVLGSGAGAGAQHALGTAVIGGMLSGTLLAIFFV 1020 AT++AVR+RLRPI+MTS+AF LGVLP+ L SGAG+GAQ A+GT V+GGM+ GTLL IFF+ Sbjct: 960 ATLQAVRVRLRPIIMTSLAFGLGVLPLALASGAGSGAQRAIGTGVVGGMIVGTLLGIFFI 1019 Query: 1021 PLFFVIIMKLFARKPHAAPQGQPAIS 1046 PLFFV++ +LF R +AP+ +I Sbjct: 1020 PLFFVLVERLFMRPKPSAPKAAESIE 1045 >gi|134095880|ref|YP_001100955.1| aminoglycoside/multidrug efflux pump [Herminiimonas arsenicoxydans] Length = 1049 Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust. Identities = 547/1016 (53%), Positives = 728/1016 (71%), Gaps = 4/1016 (0%) Query: 1 MARFFIDRPIFAWVLAIIVMLAGAISVLTLPIAQYPAIAPPAIAITANYPGASAKTLEDT 60 M +FFIDRP+FAWVLAI +MLAGA+++ +LP++QYP IAPP I ITA YPGA+A+TL+D+ Sbjct: 1 MGKFFIDRPVFAWVLAIFIMLAGALAITSLPVSQYPNIAPPTIVITATYPGATAQTLDDS 60 Query: 61 VTQVIEQKMKGLDRLSYMASTSESSGTVTITLTFENGTNPDTAQVQVQNKLSLATPLLPT 120 VT +IEQ+M G D L Y+ S S+++G V IT+TF TNPD A V V N+L LP Sbjct: 61 VTSLIEQEMNGADGLQYVESQSQANGQVQITVTFSPETNPDLAAVDVSNRLKRVEARLPA 120 Query: 121 EVQQQGITVTKSATNFLNVLAFTSEDGSMSGSDLSDYVAANVQDAISRVQGVGDTTLFGS 180 V QQG+ V K+ +NFL + +S DG + L DY++ NV + + RV GVG LFG+ Sbjct: 121 AVTQQGVQVAKARSNFLMFIGLSSTDGRLDPVALGDYLSRNVLNEVKRVPGVGQAQLFGT 180 Query: 181 QYAMRIWLDPNKLNSYALTPLDVKNAIQAQNVQVSSGQLGGLPAVENQQINATITAQTRL 240 + AMRIW+DPNKL LTP +V AI QN V+ G LG LP+ +QQI+AT+ +L Sbjct: 181 ERAMRIWIDPNKLVGLNLTPAEVTAAINTQNALVAGGILGDLPSPSSQQISATVVVNGQL 240 Query: 241 RTADQFRNIVLRTLTGGAQVKLRDVARIELGSESYTSVGRYNGKPAAGLAIKLATGANAL 300 + ++F I+LR G+ V+LRDVARIE+G +SY + GR +G P + + ++L+ ANAL Sbjct: 241 SSPEEFGKIILRANKDGSSVRLRDVARIEVGGQSYQTSGRLDGNPTSFIGVQLSPTANAL 300 Query: 301 DTVKAIDARVAQLEKFFPAGMKVQKPYDTTPFVRISIEEVVRTLVEAVVLVFLVMYLFLQ 360 T A+ ++ L ++FPAG+K PYDT+ FV+ISIEEVV+TL+EA++LVFLVMYLFLQ Sbjct: 301 GTATAVHKKMEDLARYFPAGVKYTVPYDTSKFVKISIEEVVKTLIEAIILVFLVMYLFLQ 360 Query: 361 NFRATLIPTIAVPVVLLGTFGVLAAFGFTINTLTMFAMVLAIGLLVDDAIVVVENVERVM 420 N R TLIPTI VPV LLGTF L FGF+IN LTMF MVLAIG+LVDDAIVVVENVER+M Sbjct: 361 NIRYTLIPTIVVPVALLGTFATLLVFGFSINVLTMFGMVLAIGILVDDAIVVVENVERIM 420 Query: 421 SEDGLPPKEATRKSMGQITGALVGVALVLAAVFVPMAFFSGSTGVIYRQFSITIVSAMTL 480 SE+GL P++ATRK+MGQITGA++G+ LVL AVF+PMAFF G+ G IYRQFS+++V++M Sbjct: 421 SEEGLSPRDATRKAMGQITGAIIGITLVLIAVFLPMAFFGGAVGAIYRQFSLSMVASMVF 480 Query: 481 SVLVAIVLTPALCATLLKPAAKGHALATSGFFGWFNRQFDRGNRRYQGVVRHMLGRGWRY 540 S L+A LTPALCAT+LKP KGH GFFGWFNR F + + YQG + ML + RY Sbjct: 481 SALMAFTLTPALCATILKPVEKGHHHEKGGFFGWFNRIFHKTSLSYQGFIGKMLTKTTRY 540 Query: 541 MAAYAVLLALVVTGFMKLPVGFLPDEDQGSLFAIMQLPAGATKARTDDVIHQVEHHFLVD 600 M Y +++A V + +LP FLP EDQG + +QLPAGA+ RT +V+ Q+E ++L Sbjct: 541 MIVYGLIVACVGLLYARLPASFLPSEDQGYIITNVQLPAGASSGRTLEVLKQIEEYYL-- 598 Query: 601 QKDAVAGVFSVSGFSFAGSGQNMGFAFIKLKPWDERKGPGLSVTDVVNKAGAAFAKIRDA 660 ++ AV V S+SGFSF+G+GQN G F W +R G + + +A AF++I+DA Sbjct: 599 KQPAVEHVISISGFSFSGNGQNAGLVFTPFIDWSKR-GKEDTADAIAGRAFGAFSQIKDA 657 Query: 661 KVFAFAPPAVAELGNATGFDLMLKDEANLGHAALMQARNQLLATLTKDKRLVAVRPNGLE 720 VF PP + ELGNATGF L+D LGH AL+ ARNQLL + K L VRP GLE Sbjct: 658 IVFPLNPPPIRELGNATGFTFRLQDRGGLGHDALVAARNQLLGMAGQSKILAGVRPEGLE 717 Query: 721 DTPEFRLQVDTEKAGALGVSMSDINDTIATAWGSSYVNDFIDKGRVKKVMLQADAQYRML 780 D P+ +L +D +KA ALGV + IN ++T+ GSSYVNDF ++GR ++V++QADA R+ Sbjct: 718 DAPQLQLDIDRDKANALGVPFASINSVLSTSLGSSYVNDFPNQGRQQRVIVQADAPRRLQ 777 Query: 781 PSDLDRWYVRNSAGTMVPFSAFSSAHWTSGSPRLERYNGVPSMEILGMALPGAASSGQAM 840 DL + Y R++ G MVPFS+F ++ W +G +L RYNG P+M+I G PG S+G AM Sbjct: 778 ADDLTKLYARSTTGAMVPFSSFITSKWITGPVQLIRYNGYPAMKISGGVKPG-FSTGDAM 836 Query: 841 DIVEAALAKMPPGIGYEWTGLSLQEKASSGKTGILYSISILIVFLALAALYESWAVPFSV 900 +EA + K+P GIGYEWTG SL+E+ S + LY++S++ VFL LAALYES ++P SV Sbjct: 837 KEMEALVQKLPAGIGYEWTGQSLEEQTSGNQAPALYALSLIAVFLVLAALYESTSIPLSV 896 Query: 901 ILVVPLGVFGALVGAILTWKMNDVYFQVGLLTTIGLACKNAILIVEFAKDLYEHGKNLVE 960 +LVVPLG+ GAL+G L NDVYF+VG++ +GL+ KNAILI+EFAKDL GK L+E Sbjct: 897 MLVVPLGILGALLGVTLRGMPNDVYFKVGMIAVVGLSAKNAILIIEFAKDLQAQGKGLIE 956 Query: 961 ATMEAVRMRLRPILMTSMAFILGVLPMVLGSGAGAGAQHALGTAVIGGMLSGTLLA 1016 AT+EAV +R RPI+MTS+AFILGVLP+V+ SGAG+ +Q A+GT V+GGM++ T+LA Sbjct: 957 ATLEAVHLRFRPIIMTSLAFILGVLPLVIASGAGSASQRAIGTGVMGGMITATVLA 1012 >gi|134094275|ref|YP_001099350.1| multidrug ABC transporter membrane protein [Herminiimonas arsenicoxydans] Length = 1034 Score = 331 bits (848), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 289/1058 (27%), Positives = 518/1058 (48%), Gaps = 61/1058 (5%) Query: 1 MARFFIDRPIFAWVLAIIVMLAGAISVLTLPIAQYPAIAPPAIAITANYPGASAKTLEDT 60 ++ I RP+ +L+I V++ G LPIA P+ P I +TA+ PGAS + + + Sbjct: 3 ISELCIRRPVMTVLLSIAVVVVGFFCYFKLPIAALPSYDTPVINVTASLPGASPEVMASS 62 Query: 61 VTQVIEQKMKGLDRLSYMASTSESSGTVTITLTFENGTNPDTAQVQVQNKLSLATPLLPT 120 V +E++ + ++ ++S+S + G +I L F+ + D A V VQ L A LP Sbjct: 63 VATPLEKQFSTIAGVATISSSS-TLGNTSIVLEFDQNRDIDAAAVDVQAALLRAQRSLPE 121 Query: 121 EVQQQGITVTKSATNFLNVLAFTSEDGSMSGSDLSDYVAANVQDAISRVQGVGDTTLFGS 180 E+ K +L S+S S+L+DY + ++S + GV ++G Sbjct: 122 EMNDLP-AYRKVNPADAAILLLALTSPSLSLSELNDYAENLISPSLSTIDGVAQVQVYGQ 180 Query: 181 Q-YAMRIWLDPNKLNSYALTPLDVKNAIQAQNVQVSSGQLGGLPAVENQQINATITAQTR 239 + YA+RI + P++L + +T ++ +I+A N G L G + T+ A + Sbjct: 181 RRYAVRIKVKPSELAARNMTLDEIAASIRAANANSPVGVLDG------PRQTLTLQANRQ 234 Query: 240 LRTADQFRNIVLRTLTGGAQVKLRDVARIELGSESYTSVGRYNGKPAAGLAIKLATGANA 299 L+ A+ F N+V+ + + G +L+DVA +E ES S NGKP+ LA++ AN Sbjct: 235 LQNAEAFGNLVISS-SKGQTTRLKDVATVEDSVESTKSGSWVNGKPSIVLAVQRQPNANT 293 Query: 300 LDTVKAIDARVAQLEKFFPAGMKVQKPYDTTPFVRISIEEVVRTLVEAVVLVFLVMYLFL 359 + V A+ + + PA + +Q D + +R +I +V TL+ ++LV LV++LFL Sbjct: 294 VAVVDAVKHTLPLFQSQMPASIDLQVLNDRSVSIREAIHDVKLTLLLTILLVVLVIFLFL 353 Query: 360 QNFRATLIPTIAVPVVLLGTFGVLAAFGFTINTLTMFAMVLAIGLLVDDAIVVVENVERV 419 + AT IP +++P+ L+G ++ GF+++ +++ + +A+GL+VDDAIV++EN+ R Sbjct: 354 KRLTATAIPVLSLPISLIGCCALMYWMGFSLDNVSLLGITIAVGLVVDDAIVMLENIVRH 413 Query: 420 MSEDGLPPKEATRKSMGQITGALVGVALVLAAVFVPMAFFSGSTGVIYRQFSITIVSAMT 479 + EDG+ P A K +++ ++ +++ L AVF+P+ F G G++ +F+ + A+ Sbjct: 414 I-EDGMEPLAAALKGSREVSFTIISISISLVAVFIPIFFMPGVIGLLLHEFAAVVSLAVL 472 Query: 480 LSVLVAIVLTPALCATLLKPAAKGHAL-ATSGFFGWFNRQFDRGNRRYQGVVRHMLGRGW 538 +S ++++ L P LC+ LK GH A W R F++ R L Sbjct: 473 VSAVMSLTLVPMLCSRFLKHEKAGHENDAVQPQENWLIRSFEKVFNRLLASYTRALDWSL 532 Query: 539 RYMAAYAVLLA--LVVTG--FMKLPVGFLPDEDQGSLFAIMQLPAGATKARTDDVIHQVE 594 + VL A V+T F+ +P GF P ED G + ++ P A+ ++ V Sbjct: 533 AHRTTMLVLAAGTFVLTAYLFITIPKGFFPTEDIGQISVTIEGPQDASYPTMVKLVTAVG 592 Query: 595 HHFLVDQKDAVAGVFSVSGFSFAGSGQNMGFAFIKLKPWDERKGPGLSVTDVVNKAGAAF 654 + Q D +V + N+G F+ LKP R+ D V + A Sbjct: 593 T---IIQNDP-----NVETATMRTRDSNVGNMFVGLKPRTAREP-----MDAVLRGLRAK 639 Query: 655 AKIRDAKVFAFAPPAVAELGNATG---FDLMLK----DEANL---GHAALMQARNQLLAT 704 K P LG T F +L+ DE N+ A M+A + Sbjct: 640 VKAVPGVTVYLTPVQNLRLGGRTSKSQFQYVLQSVRADELNVWAEKIQAEMRADGSFI-D 698 Query: 705 LTKDKRLVAVRPNGLEDTPEFRLQVDTEKAGALGVSMSDINDTIATAWGSSYVNDFIDKG 764 +T D +L GL+ + ++ ++A GV ++DI + +A+G V+ Sbjct: 699 VTSDSQL-----KGLQAV----VDINRDRANEAGVGIADIRTALYSAYGDRQVSTIYTSS 749 Query: 765 RVKKVMLQADAQYRMLPSDLDRWYVRNSAGTMVPFSAFSSAHWTSGSPRLERYNGVPSME 824 V+LQ ++ R SDL + Y+R+ G +VP + ++ T+G + + ++ Sbjct: 750 NSYSVILQDESVGRQDESDLSKIYLRSKTGVLVPLLSVATVKRTAGPISVNHQGQLQAIT 809 Query: 825 ILGMALPGA--ASSGQAMDIVEAALAKMPPGIGYEWTGLSLQEKASSGKTGILYSISILI 882 I PG + + +D ++ A++ +P I + G + ++S L +++++ Sbjct: 810 ISFNLAPGIPLGDATRKVDQIKDAIS-LPSSIVTNYAGDAAVFQSSQASQIALVVLALVV 868 Query: 883 VFLALAALYESWAVPFSVILVVPLGVFGALVGAILTWKMNDVYF----QVGLLTTIGLAC 938 +++ L LYES+ P +++ +P A VGA+LT ++ +G+L IGL Sbjct: 869 IYILLGVLYESYIHPVTILAGLP----SAAVGALLTLRIFGFELTMIAMIGILLLIGLVK 924 Query: 939 KNAILIVEFA-KDLYEHGKNLVEATMEAVRMRLRPILMTSMAFILGVLPMVLGSGAGAGA 997 KNAI++++FA E G +EA A +R RPI+MT++A +G LP+ LG GAGA Sbjct: 925 KNAIMMIDFALAAQREQGLTPLEAIRTACILRFRPIMMTTLAAAVGALPIALGLGAGAEL 984 Query: 998 QHALGTAVIGGMLSGTLLAIFFVPLFFVIIMKLFARKP 1035 + LG AV+GG++ ++ + P+ ++ + + P Sbjct: 985 RQPLGLAVVGGLMVSQVITLLITPVIYLFLDRFSGDGP 1022 >gi|134093332|ref|YP_001098407.1| putative acriflavin resistance/multidrug efflux transporter AcrB [Herminiimonas arsenicoxydans] Length = 1024 Score = 264 bits (674), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 283/1044 (27%), Positives = 472/1044 (45%), Gaps = 78/1044 (7%) Query: 14 VLAIIVMLAGAISVLTLPIAQYPAIAPPAIAITANYPGASAKTLEDTVTQVIEQKMKGLD 73 +L +++ LAG +S + + +P I P + ++A GA+ LE V + IE + L Sbjct: 1 MLFVLLGLAGLLSFKSAAVQDFPDIELPIVTVSAALSGAAPAQLETEVARKIEDSVATLQ 60 Query: 74 RLSYMASTSESSGTVTITLTFENGTNPDTAQVQVQNKLSLATPLLPTEVQQQGITVTKSA 133 + + T G VT+T+ F N A V++ ++ LP E++ TVTK++ Sbjct: 61 GVKNI-YTKVLDGLVTVTVEFILEKNLSDAVNDVRDAVASVRADLPAELRDP--TVTKAS 117 Query: 134 TNFLNVLAFTSEDGSMSGSD---LSDYVAANVQDAISRVQGVGDTTLFGS-QYAMRIWLD 189 T VL FT+ S D LS +V V AI V G+G G +R+ LD Sbjct: 118 TAGRVVLTFTAAAAPGSALDEQELSWFVDNTVSKAILAVPGIGAVKRVGGVTREVRVELD 177 Query: 190 PNKLNSYALTPLDVKNAIQAQNVQVSSGQLGGLPAVENQQINATITAQTRLRTADQFRNI 249 K+ + + +DV ++ + G+ G + E Q + T QT A +I Sbjct: 178 TAKMAALNVAAVDVSRRLKLVQQEAPGGR-GDVSGAE-QSVRTIATVQTAAELAAM--DI 233 Query: 250 VLRTLTGGAQVKLRDVARIELGSESYTSVGRYNGKPAAGLAIKLATGANALDTVKAIDAR 309 L G ++L VA + S +GK G I GA+ L+ A Sbjct: 234 ---PLADGHHIRLDRVATVTDTIAERRSSASQDGKTVVGFEIFRTKGASELEVANGSRAA 290 Query: 310 VAQLEKFFPAGMKVQKPYDTTPFVRISIEEVVRTLVEAVVLVFLVMYLFLQNFRATLIPT 369 VA L++ +P + + D V + E + L E L LV++ FL+++RATL+ Sbjct: 291 VAALQERYP-NVVFKLAIDNAKPVEENFEASMELLYEGAFLAVLVVWWFLRDWRATLVAA 349 Query: 370 IAVPVVLLGTFGVLAAFGFTINTLTMFAMVLAIGLLVDDAIVVVENVERVMSEDGLPPKE 429 A+P+ ++ TF LA FG+T+N +T+ ++ L +G+LVDDAIV +EN+ R + G P + Sbjct: 350 AALPLSVIPTFLGLAYFGYTLNMVTLLSLALVVGVLVDDAIVEIENISRHLRM-GKTPMQ 408 Query: 430 ATRKSMGQITGALVGVALVLAAVFVPMAFFSGSTGVIYRQFSITIVSAMTLSVLVAIVLT 489 A ++ +I A++ L AVF+P AF +G G+ ++QF T V A+ S+LVA +LT Sbjct: 409 AAMEAADEIGMAVIATTFALVAVFLPTAFMAGIPGLFFKQFGWTAVLAILASLLVARLLT 468 Query: 490 PALCATLLKPAAKGHALATSGFFGWFNRQFDRGNRRYQGVVRHMLGRGWRYMAAYAVLLA 549 P + A +LKP A GW + RY +R L A + Sbjct: 469 PMMAAYILKPTAHREEKD-----GWLMQ-------RYLKTMRWCLTHRLTTAIASGIFFF 516 Query: 550 LVVTGFMKLPVGFLPDEDQGSLFAIMQLPAGATKARTDDVIHQVEHHFLVDQKDAVAGVF 609 + LP GF+P D+ ++LP G+T A T V+ V + + + VF Sbjct: 517 GSIMLVPLLPTGFVPAADRAQTQINVELPPGSTLAETTTVVEAVRTK--IAENKNIKSVF 574 Query: 610 SVSGFSFAGSGQNMGFAFIKLKPWDERKGPGLSVT-----DVVNKAGAAFAKIRDAKV-- 662 + G G + G AF + R+ L++T D K A+IR A Sbjct: 575 ASIG------GGSSGDAFAPGASAEARRAV-LTITTTHRSDRKEKMAEIEAQIRTAIADI 627 Query: 663 ----FAFAPPAVAELGNATGFDLMLKDEANLGHAALMQARNQLLATLTKDKRLVAVRPNG 718 F PP L+L+ E + Q + L TL K + V + Sbjct: 628 PGARFTVGPP-----DTGVKMQLVLRSEDPVALLTTAQKVERELRTL---KGIGNVNSSA 679 Query: 719 LEDTPEFRLQVDTEKAGALGVSMSDINDTIATAWGSSYVNDFIDKGRVKKVMLQADAQYR 778 PE ++ D+ +A LGV+ + I +T+ A Y D K + + R Sbjct: 680 SLVRPEIIVRPDSARAADLGVTAASIGETVRVATAGDY-----DTSLPKMNLSERQVPIR 734 Query: 779 M-LPSD-------LDRWYVRNSAGTMVPFSAFSSAHWTSGSPRLERYNGVPSM----EIL 826 + LP D ++R V G ++ ++ SG +++R N ++ E+ Sbjct: 735 VKLPDDVRADLSAIERLTVPGKNGPVM-LGNVATVTMESGPAQIDRLNRSRNVTFDVELG 793 Query: 827 GMALPGAASSGQAMDIVEAALAKMPPGIGYEWTGLSLQEKASSGKTGILYSISILIVFLA 886 +L + +A+ L +PP + G + + +A G+ +I +L ++ Sbjct: 794 TRSLGDLNAEARAL----PTLQNLPPAVKIAELGDAQEMQALFNSFGLAMAIGVLCIYGV 849 Query: 887 LAALYESWAVPFSVILVVPLGVFGALVGAILTWKMNDVYFQVGLLTTIGLACKNAILIVE 946 L L++ + P +++ +PL + GA V +LT + +GL+ +G+ KN+IL+V+ Sbjct: 850 LVLLFKDFMQPVTILAALPLSIGGAFVALLLTRSALSMPSMIGLIMLMGIVTKNSILLVD 909 Query: 947 FAKDLYEHGKNLVEATMEAVRMRLRPILMTSMAFILGVLPMVLGSGAGAGAQHALGTAVI 1006 +A + G N V+A ++A R RPI+MT++A G+LP+ LG + + VI Sbjct: 910 YAILARKAGMNRVDALVDACHKRSRPIVMTTIAMGAGMLPLALGWVGDPSFRSPMAITVI 969 Query: 1007 GGMLSGTLLAIFFVPLFFVIIMKL 1030 GG+++ TLL++ VP F I L Sbjct: 970 GGLITSTLLSLLVVPAVFTYIDDL 993 >gi|134094822|ref|YP_001099897.1| RND divalent metal cation efflux transporter [Herminiimonas arsenicoxydans] Length = 1045 Score = 237 bits (605), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 252/1029 (24%), Positives = 458/1029 (44%), Gaps = 83/1029 (8%) Query: 30 LPIAQYPAIAPPAIAITANYPGASAKTLEDTVTQVIEQKMKGLDRLSYMASTSESSGTVT 89 LPI P I + I + PG S E +T IE M GL L S S G Sbjct: 34 LPIDAVPDITNVQVQINTSAPGYSPLETEQRITFPIETVMAGLPNLEQTRSLSRY-GLSQ 92 Query: 90 ITLTFENGTNPDTAQVQVQNKLSLATPLLPTEVQQQGITVTKSATNFLNVLAFTSE---- 145 +T+ F++GT+ A+ V ++ A LP + + +T + +T E Sbjct: 93 VTVIFKDGTDIYFARQMVNERIQEARQNLPPGIAP---AMGPISTGLGEIYLWTVEAKEG 149 Query: 146 ----DGS-MSGSDLSDYVAANVQDAISRVQGVGD-TTLFGSQYAMRIWLDPNKLNSYALT 199 DGS + +DL + ++ + V GV + ++ G ++ P +L SY L+ Sbjct: 150 AKKADGSAYTPADLREIQDWIIKPQLRNVSGVTEINSIGGFAKEYQVAPVPERLASYGLS 209 Query: 200 PLDVKNAIQAQNVQVSSGQLGGLPAVENQQINATITAQTRLRTADQFRNIVLRTLTGGAQ 259 DV A++ N V +G +E + I A ++++ D RNI+L + G A Sbjct: 210 LQDVVTALERNNGNVGAGY------IEKRGEQLLIRAPGQVQSMDDIRNIILGNVQGVA- 262 Query: 260 VKLRDVARIELGSESYTSVGRYNGKPAAGLAIKLATGANALDTVKAIDARVAQLEKFFPA 319 +++RDV +E+G E T NG+ + + G N+ +A+D ++ ++ + PA Sbjct: 263 IRIRDVGEVEIGRELRTGAATENGREVVLGTVFMLIGQNSRTVSQAVDRKMVEINRTLPA 322 Query: 320 GMKVQKPYDTTPFVRISIEEVVRTLVEAVVLVFLVMYLFLQNFRATLIPTIAVPVVLLGT 379 G++ YD T V +I V + L+E VLV V+++FL NFRA +I + +P+ +L T Sbjct: 323 GVQAITVYDRTVLVDKAISTVKKNLLEGAVLVIAVLFIFLGNFRAAIITAMVIPLSMLFT 382 Query: 380 FGVLAAFGFTINTLTMFAMVLAIGLLVDDAIVVVEN-VERVMSEDGLPPKEATR-KSMGQ 437 F + + + N +++ A L G++VD A+V+VEN V R+ + TR + + Sbjct: 383 FTGMVNYHVSANLMSLGA--LDFGIIVDGAVVIVENCVRRLAHAQAHHGRALTRTERFHE 440 Query: 438 ITGA-------LVGVALVLAAVFVPMAFFSGSTGVIYRQFSITIVSAMTLSVLVAIVLTP 490 + A L+ L++ AV++P+ +G G ++ + T+V A+ +++++I P Sbjct: 441 VFAAAKEARRPLIFGQLIIMAVYLPIFALTGVEGRMFHPMAFTVVIALVGAMILSITFIP 500 Query: 491 ALCATLLKPAAKGHALATSGFFGWFNRQFDRGNRRYQGVVRHMLGRGWRYMAAYAVLLAL 550 A A + + NR + Y + ++ + AVL+ Sbjct: 501 AAIALFIGGKVEEKE----------NRLMQQARTWYASALDSVMLNKPVVLTFAAVLV-- 548 Query: 551 VVTGFMKLPVG--FLPDEDQGSLFAIMQLPAGATKARTDDVIHQVEHHFLVDQKDAVAGV 608 V++G + +G F+P+ ++G FAI L T + Q L ++ + + Sbjct: 549 VLSGLLATRMGSEFVPNLNEGD-FAIQALRIPGTSLTQSVAMQQQLEKLLKEKHPEIERI 607 Query: 609 FSVSGFSFAGSGQ---NMGFAFIKLKPWDERKGPGLSVTDVVNKAGAAFAKIRDAKVFAF 665 F+ +G + S N+ +I LKP D+ P + +++ A + + + F Sbjct: 608 FARTGTAEIASDPMPPNISDGYIMLKPQDQWPEPVKTRDELLAVVQKTVASLPGSN-YEF 666 Query: 666 APP---AVAELGNATGFDLMLK---DEANLGHAALMQARNQLLATLTKDKRLVAVRPNGL 719 + P EL + D+ +K D+ ++ L +++ A + K V+ Sbjct: 667 SQPIQLRFNELISGVRSDVAVKLFGDDMDV----LNDTASKVAAVMGKIPGAAEVKVEQT 722 Query: 720 EDTPEFRLQVDTEKAGALGVSMSDINDTIATAWGSSYVNDFIDKGRVKKVMLQADAQYR- 778 P + +D EK G++++D+ DT+ATA G R ++++ R Sbjct: 723 TGLPMLTVNIDREKTARYGLNIADVQDTVATAIGGKEAGTLFQGDRRFNIIVRLPDHIRN 782 Query: 779 ------MLPSDLDRWYVRNSAGTMVPFSAFSSAHWTSGSPRLERYNG----VPSMEILGM 828 LP L R + +P + G ++ R +G V S + G Sbjct: 783 DLEAIRRLPISLPRAQGSEGRTSYIPLGEVVTLDVAPGPNQISREDGKRRIVISTNVRGR 842 Query: 829 ALPGAASSGQAMDIVEAALAKMPPGIGYEWTGLSLQEKASSGKTGILYSISILIVFLALA 888 + + +A + +P G W G Q ++++ + I+ +++L+VF+ L Sbjct: 843 DIGSFVADAEAKIRQQV---NIPSGYWTTWGGQFEQLQSATQRLKIVIPVTLLLVFVLLF 899 Query: 889 ALYESWAVPFSVILVVPLGVFGALVGAILTWKMNDVYFQ----VGLLTTIGLACKNAILI 944 A++ + V +P AL G I+ + D+ VG + G+A N +++ Sbjct: 900 AMFGNIKDGLLVFSGIPF----ALTGGIIALWLRDIPMSISAAVGFIALSGVAVLNGLVM 955 Query: 945 VEFAKDLYEHGKNLVEATMEAVRMRLRPILMTSMAFILGVLPMVLGSGAGAGAQHALGTA 1004 + F + L E G++L EA + RLRP+LMT++ LG +PM + +G GA Q L T Sbjct: 956 ISFIRSLREEGRSLEEAVRDGALTRLRPVLMTALVASLGFIPMAIATGTGAEVQRPLATV 1015 Query: 1005 VIGGMLSGT 1013 VIGG+LS T Sbjct: 1016 VIGGILSST 1024 Database: BlastDatabases/690/690 Posted date: Apr 9, 2011 4:48 AM Number of letters in database: 1,000,347 Number of sequences in database: 3295 Lambda K H 0.322 0.135 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3295 Number of Hits to DB: 1,788,238 Number of extensions: 70901 Number of successful extensions: 387 Number of sequences better than 1.0e-08: 10 Number of HSP's gapped: 319 Number of HSP's successfully gapped: 15 Length of query: 1049 Length of database: 1,000,347 Length adjustment: 91 Effective length of query: 958 Effective length of database: 700,502 Effective search space: 671080916 Effective search space used: 671080916 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 134 (56.2 bits)