BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1055.p
         (296 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094332|ref|YP_001099407.1| putative Ser/Thr protein phosph...   471   e-134

>gi|134094332|ref|YP_001099407.1| putative Ser/Thr protein
           phosphatase family protein [Herminiimonas
           arsenicoxydans]
          Length = 290

 Score =  471 bits (1211), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 225/296 (76%), Positives = 257/296 (86%), Gaps = 6/296 (2%)

Query: 1   MKPREQFMEKAQGLFADLGAEGDQHDDESKRDPLRFRTIWISDIHLGTTGCQAERLLEFL 60
           MKPR+QF+      F D  A G++ D    R P+RFRTIWISD+HLGTTGCQA+RLLEFL
Sbjct: 1   MKPRDQFLTPD---FID-AATGNKFD--PPRAPVRFRTIWISDVHLGTTGCQAQRLLEFL 54

Query: 61  RATESETLYLVGDIIDGWQLKRRWYWDQSHNNVVQTVLKKAKKGTNVIFVPGNHDEVIRQ 120
           R TESETLYLVGDIIDGWQLKRRWYW Q+HN+VVQ VLKKAKKGT VIF+PGNHDE IR+
Sbjct: 55  RKTESETLYLVGDIIDGWQLKRRWYWQQAHNDVVQIVLKKAKKGTEVIFIPGNHDEAIRE 114

Query: 121 FIDLDFGGIKIRDELVHVTAEGKRMLVLHGDRFDGVIACAKWLAYVGDSLYTMILKFNQW 180
           FIDLDFGGI++RDELVH TA+GKRMLVLHGDRFDGVIACAKWLAYVGD+LY++ILKFNQW
Sbjct: 115 FIDLDFGGIRVRDELVHTTAQGKRMLVLHGDRFDGVIACAKWLAYVGDNLYSLILKFNQW 174

Query: 181 FNSWRARAGLPYWSLSQYLKSKVKNAVNYITSFEDALAEEAKKKGLDGVICGHIHKPEIR 240
           FN WRARAGLPYWSLSQYLK KVKNAV+YI+SFE+ALA EA+++GLDGVICGHIHKPEIR
Sbjct: 175 FNVWRARAGLPYWSLSQYLKLKVKNAVSYISSFENALAAEARQRGLDGVICGHIHKPEIR 234

Query: 241 DIGGVVYCNDGDWVESLSALVEEPNGELRLVSWQEIMQLKRAGKEARQAARELAPA 296
           DI G++YCNDGDWVESLSALVEEP GELRLV+WQEI+    + K  +     ++P+
Sbjct: 235 DIDGILYCNDGDWVESLSALVEEPCGELRLVTWQEIVMSHTSAKHEKVNDLCVSPS 290


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.320    0.137    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 590,864
Number of extensions: 23798
Number of successful extensions: 62
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 62
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 1,000,347
Length adjustment: 81
Effective length of query: 215
Effective length of database: 733,452
Effective search space: 157692180
Effective search space used: 157692180
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 128 (53.9 bits)