BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0982.p
         (398 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095646|ref|YP_001100721.1| putative fatty acid desaturase ...   637   0.0  

>gi|134095646|ref|YP_001100721.1| putative fatty acid desaturase
           family protein [Herminiimonas arsenicoxydans]
          Length = 397

 Score =  637 bits (1642), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 288/396 (72%), Positives = 344/396 (86%)

Query: 3   LDAILDFVANGLLHASGWQIVIYTLVMTHITIVGVTLYLHRCQAHRALELHAIPSHFFRL 62
           LDA+LDF++NGL  ASGW +  Y L +THITI  VT+YLHRC  HR L+LH IPSHFFR 
Sbjct: 2   LDAVLDFLSNGLTRASGWTVFFYALAVTHITIAAVTIYLHRCATHRGLDLHPIPSHFFRF 61

Query: 63  WLWMTTGMVTKEWAAIHRKHHAKCETEEDPHSPQTRGIQKVMWQGAELYRSESRNAETME 122
           WLW+T+GMVTKEW AIHRKHHAKCETE+DPHSP TRGI+KV ++GAELYR+E++N ETME
Sbjct: 62  WLWLTSGMVTKEWVAIHRKHHAKCETEDDPHSPVTRGIKKVFFEGAELYRAEAKNMETME 121

Query: 123 KFGHGTPDDWLEHNIYSKYGWQGVGIMLIIDVLLFGAIGLTVWAVQMAWIPFWAAGVVNG 182
           K+G+GTPDDWLE ++Y+     G+ +MLII+V+LFG IG++VWA+QMAWIP  AAG++NG
Sbjct: 122 KYGYGTPDDWLERHVYTGRSATGIVLMLIINVMLFGVIGVSVWALQMAWIPITAAGIING 181

Query: 183 LGHFWGYRNYDCVDASTNLFPIGILIGGEEMHNNHHTFGTSAKFSAKWYEFDIGWMYIRI 242
           +GH+WGYRNY+C DA+TN+FPIGILIGGEE+HNNHHTFGTSAK S+KWYEFDIGWMYIRI
Sbjct: 182 IGHYWGYRNYECSDAATNIFPIGILIGGEELHNNHHTFGTSAKLSSKWYEFDIGWMYIRI 241

Query: 243 LETFGLAKVKKVLPVPKFDRQKAVIDFDTLQSVIANRYDVTAKYARSLKSAWKDELDHLI 302
           LET GLA VKKV P PKF+  K  +DF+TLQSVI+NRYDVTAKYA+SLK AW DE++HL 
Sbjct: 242 LETIGLATVKKVAPEPKFEHGKMHLDFNTLQSVISNRYDVTAKYAKSLKLAWHDEIEHLK 301

Query: 303 EKAKLESRFLKSSKKLLQREPGRLEDGQKQQLSELFAHSKALQTMHEMRIELSAIWERSH 362
           EKA LES FLKS+KKLL REP +LE   K+QL++LFAHSKAL+TMHEMR+EL AIWERSH
Sbjct: 302 EKANLESGFLKSTKKLLHREPAKLEAPHKEQLTQLFAHSKALKTMHEMRVELGAIWERSH 361

Query: 363 STREQLLQQLQDWCTRAEASGVKALRDFALRLRSYA 398
           ++R+QLL QLQDWC RAEASG+ ALRDF+LRLRSYA
Sbjct: 362 ASRDQLLHQLQDWCVRAEASGITALRDFSLRLRSYA 397


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.323    0.135    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 770,263
Number of extensions: 30681
Number of successful extensions: 90
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 90
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 1,000,347
Length adjustment: 84
Effective length of query: 314
Effective length of database: 723,567
Effective search space: 227200038
Effective search space used: 227200038
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 130 (54.7 bits)