BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0981.p
         (358 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095647|ref|YP_001100722.1| putative mechanosensitive ion c...   333   6e-93
gi|134096507|ref|YP_001101582.1| putative mechanosensitive ion c...    63   2e-11

>gi|134095647|ref|YP_001100722.1| putative mechanosensitive ion
           channel protein [Herminiimonas arsenicoxydans]
          Length = 451

 Score =  333 bits (855), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 197/352 (55%), Positives = 263/352 (74%), Gaps = 9/352 (2%)

Query: 2   FPLVIAQVAMRFVFYVLRGIFVKDATVGALLHLSEKLIALLVWLCVVLWITGLWPDFVDY 61
            PLV + V +R  FY+LR +F +D    + + L  +  A LVW  V L ITG+ PD   +
Sbjct: 98  LPLVASFVLVRLAFYILRRVFARDGKGRSFILLFGRGFAGLVWTIVALHITGVLPDIAQF 157

Query: 62  LDSTTLPLARHKVSLLTMLQGAASVLVTLIIALWIGTVLENRLMKFSGMHSSLRTVVARM 121
           LD T +PL R+KVSL+TMLQ A SV VTL++ALW+  + E RLMK + MHSS+R V++RM
Sbjct: 158 LDDTLIPLGRNKVSLMTMLQAALSVGVTLLVALWLSALAEERLMKLNSMHSSMRAVLSRM 217

Query: 122 MRALLILIAFLVSLSLVGIDLTVLSVFGGALGVGIGLGLQKIASSYVSGFVILLERSMVI 181
            RALLILIA L+SLS+VGIDLTVLSVFGGALGVG+GLGLQK+ASSYVSGFVILLERS+ I
Sbjct: 218 GRALLILIALLLSLSMVGIDLTVLSVFGGALGVGLGLGLQKLASSYVSGFVILLERSLAI 277

Query: 182 GDMVAVDKFFGKVTQINTRYTILEGLDGIETVLPNELFVSNPVQNYSLTHRIVRLSTQLT 241
           GD V VDKF G+V+QINTRYT+L G DG +TV+PNE+FVS+PVQN +LT  +V+++T++T
Sbjct: 278 GDTVIVDKFTGRVSQINTRYTVLRGGDGTDTVVPNEMFVSSPVQNLTLTDTLVQMTTRIT 337

Query: 242 ILYQDDVETVLSIMEQAALGVQRV--SQQTAPQALLIKIGADGLELELGFWITDPENGRL 299
           + Y+ D++  L ++E+AAL V+RV       P A+L+  GADG++L+LGFW+ DPE GR 
Sbjct: 338 VDYRTDIDLALRLLEEAALSVERVRPGPDRGPGAILVAFGADGIDLQLGFWVNDPE-GRG 396

Query: 300 NVLSEVNRAIWAAFKRHGVQVAHPKRDIRIMDE--RSFRQ----STAQENPD 345
            VLS VNRAIW +F+ H + V  P+R+IR++DE  R+ ++    +T +  PD
Sbjct: 397 GVLSNVNRAIWRSFQAHDINVPFPQREIRLIDEQYRAVKEHLNTNTRRSTPD 448


>gi|134096507|ref|YP_001101582.1| putative mechanosensitive ion
           channel protein [Herminiimonas arsenicoxydans]
          Length = 422

 Score = 63.2 bits (152), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 124/288 (43%), Gaps = 20/288 (6%)

Query: 83  AASVLVTLIIALWIG----TVLENRLMKFSGMHSSLR-----TVVARMMRALLILIAFLV 133
           A  ++V +   LWI     T LE+  +  SG++  LR     T +  ++R  ++L   L 
Sbjct: 142 AGVIVVGIQALLWINRGINTWLED--LDISGINPDLRKRATTTTMVFLLRLAVMLTVVLT 199

Query: 134 SLSLVGIDLTVLSVFGGALGVGIGLGLQKIASSYVSGFVILLERSMVIGDMVAVDK-FFG 192
            L+ +G+++T      G  G+ I L LQ I S   +   I L++   +GD + VD+   G
Sbjct: 200 VLANLGVNITAFVASLGIGGIAIALALQTILSDLFASLSIGLDKPFEVGDFIIVDEVMLG 259

Query: 193 KVTQINTRYTILEGLDGIETVLPNELFVSNPVQNYS-LTHRIVRLSTQLTILYQDDVETV 251
            V  I  + T L  L G + V  N   + + ++NY  +  R  R+     I Y+  +  V
Sbjct: 260 TVEYIGVKTTRLRSLGGEQLVRSNTELLKSVIRNYKRMAER--RIVFSFGIRYETPLAKV 317

Query: 252 LSIMEQAALGVQRVSQQTAPQALLIKIGADGLELELGFWITDPE-NGRLNVLSEVNRAIW 310
             +       +  +      +A  +K GA  L+ E+ +++   + N  +++   +N  + 
Sbjct: 318 GQLGSVLGEIISAIDNTRFDRAHFVKFGASSLDFEVVYYVLSSDYNTYMDIQQRINLELM 377

Query: 311 AAFKRHGVQVAHPKRDIRIMDERSFRQSTAQE-NPDGPGTQNSRTMPG 357
            A  + G+  A P   +    E     +  +  N D    Q+   MPG
Sbjct: 378 QACAQRGILFARPTSILHFGSEVRLASAEIEAVNKDAATLQD---MPG 422


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.325    0.140    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 608,650
Number of extensions: 21981
Number of successful extensions: 93
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 91
Number of HSP's successfully gapped: 2
Length of query: 358
Length of database: 1,000,347
Length adjustment: 83
Effective length of query: 275
Effective length of database: 726,862
Effective search space: 199887050
Effective search space used: 199887050
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 129 (54.3 bits)