BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0910.p
         (278 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134093978|ref|YP_001099053.1| prolipoprotein diacylglyceryl t...   425   e-120

>gi|134093978|ref|YP_001099053.1| prolipoprotein diacylglyceryl
           transferase [Herminiimonas arsenicoxydans]
          Length = 260

 Score =  425 bits (1092), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 196/258 (75%), Positives = 233/258 (90%)

Query: 6   MPDPVAFHIGPLAVHWYGLMYLLAFAQFIAVGRLRIKQPHIAAVGWKKEDLDDMLFYGVL 65
           MPDP+A  IGPLA+ WYGLMYL AFAQFI + R+RIKQPHIA+ GWKKED+DDMLFYGVL
Sbjct: 1   MPDPIALAIGPLAIRWYGLMYLAAFAQFIWLARIRIKQPHIASAGWKKEDIDDMLFYGVL 60

Query: 66  GVVLGGRLGEILFYNPAYYFAHPADMIAVWKGGMSFHGGFLGVLLAMYLWGRKRGRNLMD 125
           GV++GGRLGE++FY+PAYYF+HP ++  +WKGGMSFHGGFLGVL AM +W R++GRN++D
Sbjct: 61  GVIVGGRLGEVIFYDPAYYFSHPLEIFKIWKGGMSFHGGFLGVLFAMNIWARRQGRNVLD 120

Query: 126 IMDFIAPLVPLGYAAGRLGNFINAELPGRPADPSLPWAMIWPNVDNIPRHPSPIYQMLVD 185
           + DFIAP+VPLGYA GRLGNFINAELPGR AD SLPWAMIWPNVDN+PRHPSP+YQ LVD
Sbjct: 121 VWDFIAPMVPLGYAFGRLGNFINAELPGRVADASLPWAMIWPNVDNLPRHPSPLYQALVD 180

Query: 186 GILLFIILWIYARHARPRMAVAAMFSLLYGCARFFTEYFRVPDYEVHFGGITISAGQMLS 245
           G+L+FI+LWI++R ARPRMAV  MF+LLYG ARFFTEYFR+PDYEVHF GITISAGQMLS
Sbjct: 181 GLLMFILLWIFSRKARPRMAVGGMFALLYGSARFFTEYFRMPDYEVHFAGITISAGQMLS 240

Query: 246 VPMIVLGIILLVLAYKLK 263
           VP+I+LG+ +L+LAY+ K
Sbjct: 241 VPLIILGVAMLILAYRKK 258


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.330    0.147    0.481 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 571,309
Number of extensions: 24004
Number of successful extensions: 78
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 78
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 1,000,347
Length adjustment: 80
Effective length of query: 198
Effective length of database: 736,747
Effective search space: 145875906
Effective search space used: 145875906
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 128 (53.9 bits)