BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0715.p
         (337 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134093707|ref|YP_001098782.1| glycosyl transferase family pro...   387   e-109

>gi|134093707|ref|YP_001098782.1| glycosyl transferase family
           protein [Herminiimonas arsenicoxydans]
          Length = 331

 Score =  387 bits (994), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 202/310 (65%), Positives = 232/310 (74%)

Query: 26  FAAARFIKEIGRGKDGARSLSREDAQLMYQAMLDGRVSDLELGAILLAMRIKGESVEEIA 85
           F A  FIKEIGRG  GARSLSR+DA  +Y AMLDGRVSDLE+G I+LAMRIKGESV+EIA
Sbjct: 10  FPAGSFIKEIGRGVKGARSLSRDDANQLYAAMLDGRVSDLEMGGIMLAMRIKGESVDEIA 69

Query: 86  GFLAAAEASFVPLRAPSGPYAPVVLPSYNGSRKMANLTPLLCMLLVRRGVPVLMHGVTRD 145
           GF+ AAEASF  L AP G YAP+V+PSYNG+R+M NL PLL +LL R G PV +HGVTRD
Sbjct: 70  GFIDAAEASFDQLPAPHGDYAPIVIPSYNGARQMPNLLPLLALLLAREGAPVFIHGVTRD 129

Query: 146 PQRVTSAEIFSALDVRHATNASEAEALMAAGQPAFIPIAALAPAIARLLDMRARLGVRNS 205
           P RVTSAEI   L    + NA +     A   P  +PI  LAP ++RLL MR  LGVRNS
Sbjct: 130 PGRVTSAEILKELGYPVSHNAQQVAEQFARRAPVLMPIEDLAPRMSRLLAMRRILGVRNS 189

Query: 206 THTLVKIMQPFAQPALRLTSYTHPEYLEMLTDYFSHSAPHERGDVFLMRGTEGETVANAR 265
           THTLVKIMQPFA PALRLTSYTHPEYL MLT YF+ +AP ERGD FLMRGTEGETVANA+
Sbjct: 190 THTLVKIMQPFATPALRLTSYTHPEYLAMLTSYFTTAAPAERGDAFLMRGTEGETVANAK 249

Query: 266 RAQRIDWFSHGQRTVLVEKQSVAEDLPDLPEGRDAATTAQWIREVLEGRRPVPEAIAEQI 325
           RAQ+I W   G+ T+LV+KQ   +DLP LP  RDA TTA+WI   L G  PVP +I EQ+
Sbjct: 250 RAQQISWMHDGECTILVQKQEPTDDLPPLPAERDAVTTARWIEAALRGEEPVPTSILEQV 309

Query: 326 EHCVDVAARI 335
           E C+ VA  +
Sbjct: 310 EQCLLVAKHL 319


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.320    0.133    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 541,209
Number of extensions: 20106
Number of successful extensions: 69
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 69
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 1,000,347
Length adjustment: 82
Effective length of query: 255
Effective length of database: 730,157
Effective search space: 186190035
Effective search space used: 186190035
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 129 (54.3 bits)