BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0713.p
         (205 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134093696|ref|YP_001098771.1| putative glycerol-3-phosphate a...   300   3e-83

>gi|134093696|ref|YP_001098771.1| putative glycerol-3-phosphate
           acyltransferase PlsY [Herminiimonas arsenicoxydans]
          Length = 205

 Score =  300 bits (769), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 160/200 (80%), Positives = 179/200 (89%), Gaps = 1/200 (0%)

Query: 3   NILFAIAAYLIGSLSFAVLVSKLFGLSDPRTYGSKNPGATNVLRSGNKKAAALTLLGDGF 62
            +LFAI AYLIGS+SFAV+VSK F L+DPR+YGSKNPGATNVLRSGNKKAA LTLLGDG 
Sbjct: 7   TVLFAIGAYLIGSISFAVVVSKCFRLADPRSYGSKNPGATNVLRSGNKKAAILTLLGDGA 66

Query: 63  KGWLAVWLAQKFGPHYGVDDTGIALVTLAVFLGHLWPVFFRFVGGKGVATALGILLALNV 122
           KG++AVWL + FGP YGV ++G+ALV +AVFLGHLWP+FFRFVGGKGVATALGILLALN 
Sbjct: 67  KGFVAVWLVKHFGPDYGVQESGVALVAIAVFLGHLWPIFFRFVGGKGVATALGILLALNG 126

Query: 123 WLGLATLATWLVVAFAFRYSSLAALVAALFAPFYYGLLFGTTDGILLAVVAMAALLIYRH 182
           WLGLATL TWLV+A+AFRYSS AAL+AA+FAPFYY L+FG  D ILLAVVAM+ LLIYRH
Sbjct: 127 WLGLATLITWLVIAYAFRYSSFAALIAAIFAPFYYALMFG-PDAILLAVVAMSVLLIYRH 185

Query: 183 RKNIGNLLAGKESRIGDKKK 202
            KNIGNLLAGKESRIG KKK
Sbjct: 186 GKNIGNLLAGKESRIGSKKK 205


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.327    0.142    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 392,498
Number of extensions: 15897
Number of successful extensions: 80
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 79
Number of HSP's successfully gapped: 1
Length of query: 205
Length of database: 1,000,347
Length adjustment: 77
Effective length of query: 128
Effective length of database: 746,632
Effective search space: 95568896
Effective search space used: 95568896
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 126 (53.1 bits)