BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0628.p
         (330 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095782|ref|YP_001100857.1| alpha/beta family hydrolase [He...   478   e-136

>gi|134095782|ref|YP_001100857.1| alpha/beta family hydrolase
           [Herminiimonas arsenicoxydans]
          Length = 316

 Score =  478 bits (1231), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 223/314 (71%), Positives = 262/314 (83%)

Query: 1   MLYIPPRWLPGGHLQTIYPSTCLPKPELAYRRERWEAPDGDFIDIDFVDGQPGRPLLVLF 60
           M+Y  PRWLPGGHLQTIYP+ C+ KP +AYRRERW+  DGDFID+DFVDG+ G+P +V+F
Sbjct: 1   MIYPAPRWLPGGHLQTIYPAKCIAKPAVAYRRERWDTADGDFIDLDFVDGKTGQPFIVMF 60

Query: 61  HGLEGSSDSHYSRALMAEVQRRGWHGAIPHFRGCSGEINLAPRFYHSGDSAELDWIIRRL 120
           HGLEGSSDSHY+RALMA +   GW GA+ HFRGCSGE+N APRFYHSGD+ E+DWI+RRL
Sbjct: 61  HGLEGSSDSHYARALMAHIASLGWSGAVVHFRGCSGELNHAPRFYHSGDAREIDWILRRL 120

Query: 121 KLRQQDLAATHLYACGVSLGANALLRWLGESQHEAEIVDAACAVSAPLDLAGGGTALASG 180
               +   A   YA GVSLG NALLRWLGESQH+AE+VDAACA+SAPLDLAGGG AL+ G
Sbjct: 121 APHARTRGAGKFYAAGVSLGGNALLRWLGESQHQAEVVDAACAISAPLDLAGGGAALSRG 180

Query: 181 FNRLYTWVFLRTLRPKCLAKLEQFPGLFDRDALLAARDLYAFDNVVTAPLHGYRNTDDYW 240
           FN LYT +FL+TL+PKCL KL+QFPGLFDRDA++ ARDLYAFDNVVTAPLHGY NTDDYW
Sbjct: 181 FNMLYTHIFLQTLKPKCLDKLKQFPGLFDRDAMMNARDLYAFDNVVTAPLHGYLNTDDYW 240

Query: 241 DRASAKHILHDISVPTLVLNAQNDPFLPARHLPRSAAPEVVLEYPAQGGHVGFAAGGPPG 300
            RASAK++L DI+VPTLVLNA+NDPFLPA++LP  AA  + LE PA GGHVGF  G P G
Sbjct: 241 CRASAKYVLDDITVPTLVLNARNDPFLPAQYLPARAAAAITLEQPAHGGHVGFTVGAPLG 300

Query: 301 SLEWLPRRLLHFLE 314
            L WLP+R++ FL+
Sbjct: 301 QLNWLPQRIVRFLD 314


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.322    0.140    0.454 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 655,755
Number of extensions: 25216
Number of successful extensions: 61
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 61
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 1,000,347
Length adjustment: 82
Effective length of query: 248
Effective length of database: 730,157
Effective search space: 181078936
Effective search space used: 181078936
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 129 (54.3 bits)