BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0552.p
         (201 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095835|ref|YP_001100910.1| putative DSBA oxidoreductase [H...   286   3e-79

>gi|134095835|ref|YP_001100910.1| putative DSBA oxidoreductase
           [Herminiimonas arsenicoxydans]
          Length = 200

 Score =  286 bits (733), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 134/200 (67%), Positives = 162/200 (81%)

Query: 1   MSKVCEYFFAPHSPFAYLGHDRFVALAEKYQVQILPKPFDLSKIFGVSGGLPLAKRAPQR 60
           M+KVCEY+FAP SP++YLGH+R +ALA +Y V I  KP DL K+F VSGGLPLAKR PQR
Sbjct: 1   MTKVCEYYFAPQSPWSYLGHERLIALARQYDVHIEMKPVDLPKLFSVSGGLPLAKRPPQR 60

Query: 61  QAYRLKELARWSEFLGKPMVLQPTYFPVNSDTAARLIIATQLAHGTAAALRLTGAIMRAV 120
           QAYRL EL RWSE L  P+  QP +FPV+ + +A+LIIAT+ AHGT AAL LT A+MRA+
Sbjct: 61  QAYRLLELKRWSEHLNLPLNPQPKFFPVSGEPSAKLIIATKFAHGTDAALDLTSAVMRAL 120

Query: 121 WEEQRNIADTDTLVAIANALEHDGAALLKSAETASVQAEFDRFTDEANAASVFGAPWYIY 180
           W E +NI D DTL+A+ANA  HDGAAL KS+ETA+VQ E+++FT++A AASVFGAPWY+ 
Sbjct: 121 WAEDKNIMDADTLIALANAAGHDGAALFKSSETAAVQNEYEQFTNDAMAASVFGAPWYVV 180

Query: 181 QGEGYWGQDRLDFVERAFAK 200
            GE YWGQDRLDFVERAF K
Sbjct: 181 DGEAYWGQDRLDFVERAFQK 200


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.322    0.135    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 381,974
Number of extensions: 14659
Number of successful extensions: 51
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 51
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 1,000,347
Length adjustment: 77
Effective length of query: 124
Effective length of database: 746,632
Effective search space: 92582368
Effective search space used: 92582368
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 126 (53.1 bits)