BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0483.p
         (290 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095873|ref|YP_001100948.1| undecaprenyl pyrophosphate phos...   120   1e-28

>gi|134095873|ref|YP_001100948.1| undecaprenyl pyrophosphate
           phosphatase [Herminiimonas arsenicoxydans]
          Length = 277

 Score =  120 bits (300), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 136/274 (49%), Gaps = 20/274 (7%)

Query: 24  LGIVQGITELLPISSTAHMRVVPAFLGWHDPG-SAFSAAMQLAALAAVISYFRRDVTAVT 82
           +GIV+G+TE LPISST H+ +  + L +  P    F  A+Q  A+ AV+  +R  + AV 
Sbjct: 12  MGIVEGLTEFLPISSTGHLILAGSLLEFTGPKVKVFEIAIQTGAMLAVVWEYRVKIAAVL 71

Query: 83  GGSLAAWRRRDFSDPMFKLAVAIILATIPIGIAGLALSHVLNA---CGSPLRSLSVIGWS 139
           GG     R + F       AV I++A +P  + GL  +  +        P+    ++G  
Sbjct: 72  GGLFTERRAQKF-------AVNIVVAFLPAALLGLVFAGAIKEKLFAPVPVAIAFIVGGF 124

Query: 140 CIVMAGLLALSELVCRHRRSVDQMRLRDAFIVGLAQVGALIPGVSRSGSTLTAALFLNFR 199
            I+        ++     +SVD+M L DAF VG AQ  ALIPG SRSG+++   +     
Sbjct: 125 VILWVERRNKQQVHAERVQSVDEMTLLDAFKVGCAQAFALIPGTSRSGASIIGGMMFGLS 184

Query: 200 REEAARFSFLLGLP----AIALAGLKELAVLLHAHIPLQAWGVLLFGLAVASVSAFAAIW 255
           R+ A  FSF L +P    A   +  K+ A+L  A IPL   G    GLA A  SAF  + 
Sbjct: 185 RKAATEFSFFLAIPTLMGATVYSVYKDRALLSMADIPLFGLG----GLA-AFFSAFLCVR 239

Query: 256 GLMKFLERFSTWPFIVYRAALGVFLLLGVSRGWL 289
            L++++       F  YR   G+F+LL    GW+
Sbjct: 240 WLLRYISTHDFTFFAYYRIGFGLFVLLSAHYGWV 273


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.329    0.140    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 501,898
Number of extensions: 18133
Number of successful extensions: 95
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 93
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 1,000,347
Length adjustment: 81
Effective length of query: 209
Effective length of database: 733,452
Effective search space: 153291468
Effective search space used: 153291468
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 128 (53.9 bits)