BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0482.p
         (284 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095873|ref|YP_001100948.1| undecaprenyl pyrophosphate phos...   407   e-115

>gi|134095873|ref|YP_001100948.1| undecaprenyl pyrophosphate
           phosphatase [Herminiimonas arsenicoxydans]
          Length = 277

 Score =  407 bits (1045), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 201/284 (70%), Positives = 239/284 (84%), Gaps = 7/284 (2%)

Query: 1   MDTLLALKALIMGIVEGLTEFLPISSTGHLILTNSLLQFTGPDFSKEKADVFEIVIQAGA 60
           MDT+LALK +IMGIVEGLTEFLPISSTGHLIL  SLL+FTGP     K  VFEI IQ GA
Sbjct: 1   MDTILALKVIIMGIVEGLTEFLPISSTGHLILAGSLLEFTGP-----KVKVFEIAIQTGA 55

Query: 61  ILAVCWEYRVRIATVLTGMFSDRKAQRLVINLIVAFLPAAILGFLFSRRIKDVLFNPVSV 120
           +LAV WEYRV+IA VL G+F++R+AQ+  +N++VAFLPAA+LG +F+  IK+ LF PV V
Sbjct: 56  MLAVVWEYRVKIAAVLGGLFTERRAQKFAVNIVVAFLPAALLGLVFAGAIKEKLFAPVPV 115

Query: 121 AIAFIVGGLIILWVERRNKDRMSMASARVETVDDMTPLDALKVGIAQAFALIPGTSRSGA 180
           AIAFIVGG +ILWVERRNK ++   + RV++VD+MT LDA KVG AQAFALIPGTSRSGA
Sbjct: 116 AIAFIVGGFVILWVERRNKQQVH--AERVQSVDEMTLLDAFKVGCAQAFALIPGTSRSGA 173

Query: 181 TIIGGMMFGLSRKAATEFSFFLAIPTLFAATIYSLYKERALLSAADVPLFTVGTVAAFVS 240
           +IIGGMMFGLSRKAATEFSFFLAIPTL  AT+YS+YK+RALLS AD+PLF +G +AAF S
Sbjct: 174 SIIGGMMFGLSRKAATEFSFFLAIPTLMGATVYSVYKDRALLSMADIPLFGLGGLAAFFS 233

Query: 241 AFLCVRWLLRYISSHDFTIFAWYRIVFGIIVLVTAYTGTVAWVD 284
           AFLCVRWLLRYIS+HDFT FA+YRI FG+ VL++A+ G V W +
Sbjct: 234 AFLCVRWLLRYISTHDFTFFAYYRIGFGLFVLLSAHYGWVVWAE 277


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.330    0.141    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 508,273
Number of extensions: 19596
Number of successful extensions: 81
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 79
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 1,000,347
Length adjustment: 81
Effective length of query: 203
Effective length of database: 733,452
Effective search space: 148890756
Effective search space used: 148890756
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 128 (53.9 bits)