BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0477.p
         (107 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095876|ref|YP_001100951.1| putative thiosulfate sulfurtran...   149   2e-38
gi|134096130|ref|YP_001101205.1| thiosulfate sulfurtransferase [...    58   1e-10

>gi|134095876|ref|YP_001100951.1| putative thiosulfate
           sulfurtransferase [Herminiimonas arsenicoxydans]
          Length = 107

 Score =  149 bits (377), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 65/107 (60%), Positives = 83/107 (77%)

Query: 1   MEHISAPELAAWINDPDRPTPLLLDVREPWEHQTCHIAGVQLVPMNTIPGRFSEFDEEQP 60
           M+HI+APELAA + D      +LLDVREPWE+QTC I G   +PMNTIP + ++ D++  
Sbjct: 1   MQHITAPELAALLADGSGKARILLDVREPWEYQTCRIEGAISIPMNTIPDQLAQLDKDAA 60

Query: 61  VVCICHHGGRSMQVAAFLERQGFSKVINLSGGVHAWASQVDPSMPTY 107
           +VCICHHG RSM+VA FLE QG++ V NL+GG+HAWA QVDP+MPTY
Sbjct: 61  IVCICHHGARSMRVAHFLESQGYTHVTNLTGGIHAWAQQVDPAMPTY 107


>gi|134096130|ref|YP_001101205.1| thiosulfate sulfurtransferase
           [Herminiimonas arsenicoxydans]
          Length = 133

 Score = 58.2 bits (139), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 2/80 (2%)

Query: 22  LLLDVREPWEHQTCHIAGVQLVPMNTIPGRFSEFDE--EQPVVCICHHGGRSMQVAAFLE 79
           L+LDVR   +    HI   + +P+  +  R SE ++  E+PV+ +C  G +S++  A L+
Sbjct: 48  LILDVRNAADFALGHIRDAKNIPLKELKTRVSELEKFKERPVIVVCTKGLQSVKATAQLK 107

Query: 80  RQGFSKVINLSGGVHAWASQ 99
           + G++   +L GG+ AW SQ
Sbjct: 108 KAGYANAASLLGGLDAWQSQ 127


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.321    0.136    0.447 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 240,459
Number of extensions: 8955
Number of successful extensions: 20
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 2
Length of query: 107
Length of database: 1,000,347
Length adjustment: 69
Effective length of query: 38
Effective length of database: 772,992
Effective search space: 29373696
Effective search space used: 29373696
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 122 (51.6 bits)